RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 ANTXR2P58335 489 aa17.02■□□□□ 0.32
CCHCR1-229ENST00000512418 KIAA0753Q2KHM9 967 aa17.02■□□□□ 0.32
CCHCR1-229ENST00000512418 HSDL1Q3SXM5 330 aa17.02■□□□□ 0.32
CCHCR1-229ENST00000512418 LRRC8DQ7L1W4 858 aa17.02■□□□□ 0.32
CCHCR1-229ENST00000512418 FCHSD1Q86WN1 690 aa17.02■□□□□ 0.32
CCHCR1-229ENST00000512418 MB21D2Q8IYB1 491 aaPredicted RBP17.02■□□□□ 0.32
CCHCR1-229ENST00000512418 SPATA33Q96N06 139 aa17.02■□□□□ 0.32
CCHCR1-229ENST00000512418 MAP3K14Q99558 947 aa17.02■□□□□ 0.32
CCHCR1-229ENST00000512418 ALG1Q9BT22 464 aa17.02■□□□□ 0.32
CCHCR1-229ENST00000512418 TET1Q8NFU7 2136 aa17.02■□□□□ 0.31
CCHCR1-229ENST00000512418 MUC3AQ02505 3323 aa17.01■□□□□ 0.31
CCHCR1-229ENST00000512418 DDAH1O94760 285 aa17.01■□□□□ 0.31
CCHCR1-229ENST00000512418 CKBP12277 381 aa17.01■□□□□ 0.31
CCHCR1-229ENST00000512418 PTK7Q13308 1070 aa17.01■□□□□ 0.31
CCHCR1-229ENST00000512418 HERC6Q8IVU3 1022 aa17.01■□□□□ 0.31
CCHCR1-229ENST00000512418 CTCFLQ8NI51 663 aaPredicted RBP17.01■□□□□ 0.31
CCHCR1-229ENST00000512418 MTA3Q9BTC8 594 aa17.01■□□□□ 0.31
CCHCR1-229ENST00000512418 PRDM6Q9NQX0 595 aa17.01■□□□□ 0.31
CCHCR1-229ENST00000512418 THEGQ9P2T0 379 aa17.01■□□□□ 0.31
CCHCR1-229ENST00000512418 FRMPD4Q14CM0 1322 aa17■□□□□ 0.31
CCHCR1-229ENST00000512418 KIF28PB7ZC32 967 aa17■□□□□ 0.31
CCHCR1-229ENST00000512418 STAM2O75886 525 aa17■□□□□ 0.31
CCHCR1-229ENST00000512418 KIF5BP33176 963 aa17■□□□□ 0.31
CCHCR1-229ENST00000512418 KCNJ6P48051 423 aa17■□□□□ 0.31
CCHCR1-229ENST00000512418 GPNMBQ14956 572 aa17■□□□□ 0.31
CCHCR1-229ENST00000512418 GNPTABQ3T906 1256 aa17■□□□□ 0.31
CCHCR1-229ENST00000512418 ZNF654Q8IZM8 581 aa17■□□□□ 0.31
CCHCR1-229ENST00000512418 ATXN2LQ8WWM7 1075 aaKnown RBP17■□□□□ 0.31
CCHCR1-229ENST00000512418 TTC28Q96AY4 2481 aa17■□□□□ 0.31
CCHCR1-229ENST00000512418 SPZ1Q9BXG8 430 aa17■□□□□ 0.31
CCHCR1-229ENST00000512418 MLXIPQ9HAP2 919 aa17■□□□□ 0.31
CCHCR1-229ENST00000512418 LY9Q9HBG7 655 aa17■□□□□ 0.31
CCHCR1-229ENST00000512418 SORBS3O60504 671 aa16.99■□□□□ 0.31
CCHCR1-229ENST00000512418 CXCL10P02778 98 aa16.99■□□□□ 0.31
CCHCR1-229ENST00000512418 SMARCA1P28370 1054 aa16.99■□□□□ 0.31
CCHCR1-229ENST00000512418 SP2Q02086 613 aa16.99■□□□□ 0.31
CCHCR1-229ENST00000512418 CCDC85BQ15834 202 aaPredicted RBP16.99■□□□□ 0.31
CCHCR1-229ENST00000512418 CNKSR3Q6P9H4 555 aa16.99■□□□□ 0.31
CCHCR1-229ENST00000512418 CASC1Q6TDU7 716 aa16.99■□□□□ 0.31
CCHCR1-229ENST00000512418 PIBF1Q8WXW3 757 aa16.99■□□□□ 0.31
CCHCR1-229ENST00000512418 GPKOWQ92917 476 aaPredicted RBP eCLIP16.99■□□□□ 0.315e-9■■■■□ 21.7
CCHCR1-229ENST00000512418 RRP36Q96EU6 259 aaKnown RBP16.99■□□□□ 0.31
CCHCR1-229ENST00000512418 INPP4AQ96PE3 977 aaPredicted RBP16.99■□□□□ 0.31
CCHCR1-229ENST00000512418 TRANK1O15050 2925 aa16.98■□□□□ 0.31
CCHCR1-229ENST00000512418 PRC1O43663 620 aa16.98■□□□□ 0.31
CCHCR1-229ENST00000512418 NBNO60934 754 aa16.98■□□□□ 0.31
CCHCR1-229ENST00000512418 ICAM3P32942 547 aa16.98■□□□□ 0.31
CCHCR1-229ENST00000512418 MCM5P33992 734 aa16.98■□□□□ 0.31
CCHCR1-229ENST00000512418 WDR5P61964 334 aaKnown RBP16.98■□□□□ 0.31
CCHCR1-229ENST00000512418 MRPS9P82933 396 aaKnown RBP16.98■□□□□ 0.31
CCHCR1-229ENST00000512418 ZFP91Q96JP5 570 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-229ENST00000512418 LZTS2Q9BRK4 669 aa16.98■□□□□ 0.31
CCHCR1-229ENST00000512418 C16orf70Q9BSU1 422 aa16.98■□□□□ 0.31
CCHCR1-229ENST00000512418 MYL10Q9BUA6 226 aa16.98■□□□□ 0.31
CCHCR1-229ENST00000512418 SEC63Q9UGP8 760 aaKnown RBP16.98■□□□□ 0.31
CCHCR1-229ENST00000512418 NOP56O00567 594 aaKnown RBP16.97■□□□□ 0.31
CCHCR1-229ENST00000512418 TLL1O43897 1013 aa16.97■□□□□ 0.31
CCHCR1-229ENST00000512418 GNAQP50148 359 aa16.97■□□□□ 0.31
CCHCR1-229ENST00000512418 TAP1Q03518 808 aa16.97■□□□□ 0.31
CCHCR1-229ENST00000512418 NEDD9Q14511 834 aa16.97■□□□□ 0.31
CCHCR1-229ENST00000512418 TRIM71Q2Q1W2 868 aaKnown RBP16.97■□□□□ 0.31
CCHCR1-229ENST00000512418 METTL7BQ6UX53 244 aa16.97■□□□□ 0.31
CCHCR1-229ENST00000512418 NFXL1Q6ZNB6 911 aa16.97■□□□□ 0.31
CCHCR1-229ENST00000512418 TMTC2Q8N394 836 aa16.97■□□□□ 0.31
CCHCR1-229ENST00000512418 SMARCC2Q8TAQ2 1214 aa16.97■□□□□ 0.31
CCHCR1-229ENST00000512418 CUL5Q93034 780 aa16.97■□□□□ 0.31
CCHCR1-229ENST00000512418 WNT8BQ93098 351 aa16.97■□□□□ 0.31
CCHCR1-229ENST00000512418 TMEM87BQ96K49 555 aa16.97■□□□□ 0.31
CCHCR1-229ENST00000512418 ASB2Q96Q27 587 aa16.97■□□□□ 0.31
CCHCR1-229ENST00000512418 LSG1Q9H089 658 aaKnown RBP16.97■□□□□ 0.31
CCHCR1-229ENST00000512418 TSPYL2Q9H2G4 693 aaPredicted RBP16.97■□□□□ 0.31
CCHCR1-229ENST00000512418 PTPRSQ13332 1948 aa16.97■□□□□ 0.31
CCHCR1-229ENST00000512418 XIRP2A4UGR9 3374 aa16.97■□□□□ 0.31
CCHCR1-229ENST00000512418 REV3LO60673 3130 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 ABHD14A-ACY1A0A1B0GW23 586 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 CCDC69A6NI79 296 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 SPATA31C2B4DYI2 1134 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 H3BRB1 525 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 PIK3CDO00329 1044 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 SH2B2O14492 632 aaPredicted RBP16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 FIBPO43427 364 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 GTPBP6O43824 516 aaPredicted RBP16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 EFCAB14O75071 495 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 LGALS2P05162 132 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 CALM1P0DP23 149 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 CALM2P0DP24 149 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 CALM3P0DP25 149 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 POU3F3P20264 500 aaPredicted RBP16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 ZNF200P98182 395 aaPredicted RBP16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 HIC1Q14526 733 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 ZNF618Q5T7W0 954 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 XRRA1Q6P2D8 792 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 TRAF7Q6Q0C0 670 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 SERINC5Q86VE9 423 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 MICALL1Q8N3F8 863 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 ESYT1Q9BSJ8 1104 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 TUT1Q9H6E5 874 aaKnown RBP16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 CERS4Q9HA82 394 aa16.96■□□□□ 0.31
CCHCR1-229ENST00000512418 EMSYQ7Z589 1322 aa16.96■□□□□ 0.3
CCHCR1-229ENST00000512418 C17orf102A2RUQ5 167 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms