RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 EIF2AK2P19525 551 aaKnown RBP22.3■■□□□ 1.16
SMAD1-211ENST00000512019 TLE2Q04725 743 aa22.3■■□□□ 1.16
SMAD1-211ENST00000512019 NR5A1Q13285 461 aa22.3■■□□□ 1.16
SMAD1-211ENST00000512019 FGD4Q96M96 766 aa22.3■■□□□ 1.16
SMAD1-211ENST00000512019 FAM161BQ96MY7 647 aa22.3■■□□□ 1.16
SMAD1-211ENST00000512019 ASTN1O14525 1302 aa22.3■■□□□ 1.16
SMAD1-211ENST00000512019 AKR1A1P14550 325 aa22.29■■□□□ 1.16
SMAD1-211ENST00000512019 SREBF1P36956 1147 aa22.29■■□□□ 1.16
SMAD1-211ENST00000512019 NONOQ15233 471 aaKnown RBP eCLIP22.29■■□□□ 1.16
SMAD1-211ENST00000512019 TNFRSF25Q93038 417 aa22.29■■□□□ 1.16
SMAD1-211ENST00000512019 PGBD1Q96JS3 809 aa22.29■■□□□ 1.16
SMAD1-211ENST00000512019 GUCD1Q96NT3 240 aa22.29■■□□□ 1.16
SMAD1-211ENST00000512019 IPO9Q96P70 1041 aaKnown RBP22.29■■□□□ 1.16
SMAD1-211ENST00000512019 PDCD2LQ9BRP1 358 aa22.29■■□□□ 1.16
SMAD1-211ENST00000512019 SYNGAP1Q96PV0 1343 aa22.29■■□□□ 1.16
SMAD1-211ENST00000512019 SNAI1O95863 264 aaPredicted RBP22.28■■□□□ 1.16
SMAD1-211ENST00000512019 ITGB8P26012 769 aa22.28■■□□□ 1.16
SMAD1-211ENST00000512019 U2AF2P26368 475 aaKnown RBP eCLIP22.28■■□□□ 1.16
SMAD1-211ENST00000512019 CCND2P30279 289 aa22.28■■□□□ 1.16
SMAD1-211ENST00000512019 PDE4DQ08499 809 aa22.28■■□□□ 1.16
SMAD1-211ENST00000512019 PGM5Q15124 567 aa22.28■■□□□ 1.16
SMAD1-211ENST00000512019 C1orf53Q5VUE5 145 aa22.28■■□□□ 1.16
SMAD1-211ENST00000512019 XRRA1Q6P2D8 792 aa22.28■■□□□ 1.16
SMAD1-211ENST00000512019 MAMDC4Q6UXC1 1216 aa22.28■■□□□ 1.16
SMAD1-211ENST00000512019 PIK3AP1Q6ZUJ8 805 aa22.28■■□□□ 1.16
SMAD1-211ENST00000512019 NOSTRINQ8IVI9 506 aa22.28■■□□□ 1.16
SMAD1-211ENST00000512019 A0A1W2PQ45 241 aaPredicted RBP22.27■■□□□ 1.16
SMAD1-211ENST00000512019 A0A1W2PQY0 241 aa22.27■■□□□ 1.16
SMAD1-211ENST00000512019 ADAMTS4O75173 837 aa22.27■■□□□ 1.16
SMAD1-211ENST00000512019 NR3C2P08235 984 aa22.27■■□□□ 1.16
SMAD1-211ENST00000512019 EDNRBP24530 442 aa22.27■■□□□ 1.16
SMAD1-211ENST00000512019 PCNX4Q63HM2 1172 aa22.27■■□□□ 1.16
SMAD1-211ENST00000512019 ARMCX2Q7L311 632 aa22.27■■□□□ 1.16
SMAD1-211ENST00000512019 RNF180Q86T96 592 aa22.27■■□□□ 1.16
SMAD1-211ENST00000512019 MORC4Q8TE76 937 aa22.27■■□□□ 1.16
SMAD1-211ENST00000512019 MTMR6Q9Y217 621 aa22.27■■□□□ 1.16
SMAD1-211ENST00000512019 CNPY2Q9Y2B0 182 aa22.27■■□□□ 1.16
SMAD1-211ENST00000512019 KIF28PB7ZC32 967 aa22.26■■□□□ 1.15
SMAD1-211ENST00000512019 STAM2O75886 525 aa22.26■■□□□ 1.15
SMAD1-211ENST00000512019 IRX5P78411 483 aaPredicted RBP22.26■■□□□ 1.15
SMAD1-211ENST00000512019 ARHGAP4P98171 946 aa22.26■■□□□ 1.15
SMAD1-211ENST00000512019 FAM109BQ6ICB4 259 aaPredicted RBP22.26■■□□□ 1.15
SMAD1-211ENST00000512019 TBCKQ8TEA7 893 aa22.26■■□□□ 1.15
SMAD1-211ENST00000512019 ZHX1Q9UKY1 873 aaPredicted RBP22.26■■□□□ 1.15
SMAD1-211ENST00000512019 SYNRGQ9UMZ2 1314 aa22.26■■□□□ 1.15
SMAD1-211ENST00000512019 LRRC37A2A6NM11 1700 aa22.26■■□□□ 1.15
SMAD1-211ENST00000512019 MYCLP12524 364 aaPredicted RBP22.25■■□□□ 1.15
SMAD1-211ENST00000512019 STXBP2Q15833 593 aa22.25■■□□□ 1.15
SMAD1-211ENST00000512019 BRAPQ7Z569 592 aa22.25■■□□□ 1.15
SMAD1-211ENST00000512019 IL31RAQ8NI17 732 aa22.25■■□□□ 1.15
SMAD1-211ENST00000512019 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.25■■□□□ 1.15
SMAD1-211ENST00000512019 MYADML2A6NDP7 307 aa22.24■■□□□ 1.15
SMAD1-211ENST00000512019 ADCY6O43306 1168 aa22.24■■□□□ 1.15
SMAD1-211ENST00000512019 PQBP1O60828 265 aaKnown RBP22.24■■□□□ 1.15
SMAD1-211ENST00000512019 CLTBP09497 229 aa22.24■■□□□ 1.15
SMAD1-211ENST00000512019 USP11P51784 963 aa22.24■■□□□ 1.15
SMAD1-211ENST00000512019 EPHB4P54760 987 aa22.24■■□□□ 1.15
SMAD1-211ENST00000512019 INF2Q27J81 1249 aa22.24■■□□□ 1.15
SMAD1-211ENST00000512019 NEK8Q86SG6 692 aa22.24■■□□□ 1.15
SMAD1-211ENST00000512019 VSIG10LQ86VR7 867 aa22.24■■□□□ 1.15
SMAD1-211ENST00000512019 CRYGNQ8WXF5 182 aa22.24■■□□□ 1.15
SMAD1-211ENST00000512019 NOL7Q9UMY1 257 aaKnown RBP22.24■■□□□ 1.15
SMAD1-211ENST00000512019 EIF3JO75822 258 aaKnown RBP22.23■■□□□ 1.15
SMAD1-211ENST00000512019 CYP3A4P08684 503 aa22.23■■□□□ 1.15
SMAD1-211ENST00000512019 ZSCAN22P10073 491 aaPredicted RBP22.23■■□□□ 1.15
SMAD1-211ENST00000512019 ZNF76P36508 570 aa22.23■■□□□ 1.15
SMAD1-211ENST00000512019 ACLYP53396 1101 aa22.23■■□□□ 1.15
SMAD1-211ENST00000512019 EARS2Q5JPH6 523 aaKnown RBP22.23■■□□□ 1.15
SMAD1-211ENST00000512019 FERMT3Q86UX7 667 aa22.23■■□□□ 1.15
SMAD1-211ENST00000512019 KLHDC9Q8NEP7 349 aa22.23■■□□□ 1.15
SMAD1-211ENST00000512019 NAP1L4Q99733 375 aaKnown RBP22.23■■□□□ 1.15
SMAD1-211ENST00000512019 ZSCAN16Q9H4T2 348 aaPredicted RBP22.23■■□□□ 1.15
SMAD1-211ENST00000512019 VTA1Q9NP79 307 aa22.23■■□□□ 1.15
SMAD1-211ENST00000512019 FAM184BQ9ULE4 1060 aa22.23■■□□□ 1.15
SMAD1-211ENST00000512019 FAM205CA6NFA0 338 aa22.22■■□□□ 1.15
SMAD1-211ENST00000512019 TRAPPC10P48553 1259 aa22.22■■□□□ 1.15
SMAD1-211ENST00000512019 GNPTABQ3T906 1256 aa22.22■■□□□ 1.15
SMAD1-211ENST00000512019 ZNF697Q5TEC3 545 aa22.22■■□□□ 1.15
SMAD1-211ENST00000512019 CCSAPQ6IQ19 270 aaPredicted RBP22.22■■□□□ 1.15
SMAD1-211ENST00000512019 ABHD16BQ9H3Z7 469 aa22.22■■□□□ 1.15
SMAD1-211ENST00000512019 MYH7BA7E2Y1 1941 aa22.21■■□□□ 1.15
SMAD1-211ENST00000512019 KIAA0355O15063 1070 aa22.21■■□□□ 1.15
SMAD1-211ENST00000512019 GCFC2P16383 781 aaKnown RBP22.21■■□□□ 1.15
SMAD1-211ENST00000512019 DDIT3P35638 169 aa22.21■■□□□ 1.15
SMAD1-211ENST00000512019 NUCB2P80303 420 aa22.21■■□□□ 1.15
SMAD1-211ENST00000512019 MRPS9P82933 396 aaKnown RBP22.21■■□□□ 1.15
SMAD1-211ENST00000512019 RESTQ13127 1097 aa22.21■■□□□ 1.15
SMAD1-211ENST00000512019 ACVR2BQ13705 512 aa22.21■■□□□ 1.15
SMAD1-211ENST00000512019 PKP1Q13835 747 aa22.21■■□□□ 1.15
SMAD1-211ENST00000512019 KCNA10Q16322 511 aa22.21■■□□□ 1.15
SMAD1-211ENST00000512019 LETM2Q2VYF4 491 aa22.21■■□□□ 1.15
SMAD1-211ENST00000512019 MOXD1Q6UVY6 613 aa22.21■■□□□ 1.15
SMAD1-211ENST00000512019 TSEN34Q9BSV6 310 aaKnown RBP22.21■■□□□ 1.15
SMAD1-211ENST00000512019 STARD7Q9NQZ5 370 aa22.21■■□□□ 1.15
SMAD1-211ENST00000512019 CIZ1Q9ULV3 898 aaPredicted RBP22.21■■□□□ 1.15
SMAD1-211ENST00000512019 DDX49Q9Y6V7 483 aaKnown RBP22.21■■□□□ 1.15
SMAD1-211ENST00000512019 DUSP11O75319 330 aaKnown RBP22.2■■□□□ 1.14
SMAD1-211ENST00000512019 CIITAP33076 1130 aa22.2■■□□□ 1.14
SMAD1-211ENST00000512019 FAAP100Q0VG06 881 aa22.2■■□□□ 1.14
SMAD1-211ENST00000512019 CEP55Q53EZ4 464 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms