RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 TMEM151BQ8IW70 566 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 RCBTB1Q8NDN9 531 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 PTPRN2Q92932 1015 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 DDX11Q96FC9 970 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 DNAJC7Q99615 494 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 DHRS4Q9BTZ2 278 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 PHF20Q9BVI0 1012 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 EPB41L1Q9H4G0 881 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 CLDND1Q9NY35 253 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 IRAK3Q9Y616 596 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 X6R8D5 127 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 ADAMTS20P59510 1910 aa6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 FOXD2O60548 495 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 BCL6P41182 706 aa6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 GRIA2P42262 883 aa6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 GPR85P60893 370 aa6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 BMS1Q14692 1282 aaKnown RBP6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 KIR3DS1Q14943 382 aa6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 SF1Q15637 639 aaKnown RBP6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 INF2Q27J81 1249 aa6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 STYK1Q6J9G0 422 aa6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 TEX2Q8IWB9 1127 aa6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 Q8N1Y9 231 aa6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 ALG3Q92685 438 aa6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 OSBP2Q969R2 916 aa6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 C1orf159Q96HA4 380 aa6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 SIGLEC10Q96LC7 697 aa6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 KCNC2Q96PR1 638 aa6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 YIPF4Q9BSR8 244 aa6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 CNOT6Q9ULM6 557 aaKnown RBP6.08□□□□□ -1.44
HMGB3P13-201ENST00000511263 LAMC3Q9Y6N6 1575 aa6.07□□□□□ -1.44
HMGB3P13-201ENST00000511263 ZC3H12DA2A288 527 aaKnown RBP6.07□□□□□ -1.44
HMGB3P13-201ENST00000511263 FAM47E-STBD1D6RA91 191 aa6.07□□□□□ -1.44
HMGB3P13-201ENST00000511263 TRIM13O60858 407 aa6.07□□□□□ -1.44
HMGB3P13-201ENST00000511263 NTRK1P04629 796 aa6.07□□□□□ -1.44
HMGB3P13-201ENST00000511263 SDHBP21912 280 aa6.07□□□□□ -1.44
HMGB3P13-201ENST00000511263 PRR5P85299 388 aa6.07□□□□□ -1.44
HMGB3P13-201ENST00000511263 SPIRE1Q08AE8 756 aa6.07□□□□□ -1.44
HMGB3P13-201ENST00000511263 SSPNQ14714 243 aa6.07□□□□□ -1.44
HMGB3P13-201ENST00000511263 C2orf27AQ580R0 203 aa6.07□□□□□ -1.44
HMGB3P13-201ENST00000511263 CYP4F22Q6NT55 531 aa6.07□□□□□ -1.44
HMGB3P13-201ENST00000511263 ZC3H18Q86VM9 953 aaKnown RBP6.07□□□□□ -1.44
HMGB3P13-201ENST00000511263 TRIM48Q8IWZ4 208 aa6.07□□□□□ -1.44
HMGB3P13-201ENST00000511263 SYNPOQ8N3V7 929 aa6.07□□□□□ -1.44
HMGB3P13-201ENST00000511263 PHOSPHO1Q8TCT1 267 aa6.07□□□□□ -1.44
HMGB3P13-201ENST00000511263 PLEKHO2Q8TD55 490 aa6.07□□□□□ -1.44
HMGB3P13-201ENST00000511263 MZB1Q8WU39 189 aa6.07□□□□□ -1.44
HMGB3P13-201ENST00000511263 MBD1Q9UIS9 605 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P13-201ENST00000511263 FAM221BA6H8Z2 402 aa6.06□□□□□ -1.44
HMGB3P13-201ENST00000511263 HGSO14964 777 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P13-201ENST00000511263 ADCY3O60266 1144 aa6.06□□□□□ -1.44
HMGB3P13-201ENST00000511263 EFEMP2O95967 443 aa6.06□□□□□ -1.44
HMGB3P13-201ENST00000511263 CYP4F3Q08477 520 aa6.06□□□□□ -1.44
HMGB3P13-201ENST00000511263 CCDC144BQ3MJ40 725 aa6.06□□□□□ -1.44
HMGB3P13-201ENST00000511263 MTDHQ86UE4 582 aaKnown RBP6.06□□□□□ -1.44
HMGB3P13-201ENST00000511263 LDHDQ86WU2 507 aa6.06□□□□□ -1.44
HMGB3P13-201ENST00000511263 CCDC103Q8IW40 242 aa6.06□□□□□ -1.44
HMGB3P13-201ENST00000511263 DPF3Q92784 378 aa6.06□□□□□ -1.44
HMGB3P13-201ENST00000511263 LNPKQ9C0E8 428 aa6.06□□□□□ -1.44
HMGB3P13-201ENST00000511263 TMEFF2Q9UIK5 374 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P13-201ENST00000511263 KCTD3Q9Y597 815 aa6.06□□□□□ -1.44
HMGB3P13-201ENST00000511263 WRNQ14191 1432 aaPredicted RBP eCLIP6.06□□□□□ -1.44
HMGB3P13-201ENST00000511263 RRP9O43818 475 aaKnown RBP6.05□□□□□ -1.44
HMGB3P13-201ENST00000511263 DIAPH1O60610 1272 aaKnown RBP6.05□□□□□ -1.44
HMGB3P13-201ENST00000511263 FAM153BP0C7A2 387 aa6.05□□□□□ -1.44
HMGB3P13-201ENST00000511263 KRTAP10-2P60368 255 aa6.05□□□□□ -1.44
HMGB3P13-201ENST00000511263 ZNF200P98182 395 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P13-201ENST00000511263 FAM47CQ5HY64 1035 aa6.05□□□□□ -1.44
HMGB3P13-201ENST00000511263 MBLAC2Q68D91 279 aa6.05□□□□□ -1.44
HMGB3P13-201ENST00000511263 LBX2Q6XYB7 198 aa6.05□□□□□ -1.44
HMGB3P13-201ENST00000511263 EP400NLQ6ZTU2 488 aa6.05□□□□□ -1.44
HMGB3P13-201ENST00000511263 DHX37Q8IY37 1157 aaKnown RBP6.05□□□□□ -1.44
HMGB3P13-201ENST00000511263 JMYQ8N9B5 988 aa6.05□□□□□ -1.44
HMGB3P13-201ENST00000511263 MARCH10Q8NA82 808 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P13-201ENST00000511263 IPO4Q8TEX9 1081 aaKnown RBP6.05□□□□□ -1.44
HMGB3P13-201ENST00000511263 CNTD2Q9H8S5 307 aa6.05□□□□□ -1.44
HMGB3P13-201ENST00000511263 ZNF652Q9Y2D9 606 aa6.05□□□□□ -1.44
HMGB3P13-201ENST00000511263 MRPS23Q9Y3D9 190 aaKnown RBP6.05□□□□□ -1.44
HMGB3P13-201ENST00000511263 ARID4BQ4LE39 1312 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P13-201ENST00000511263 FANCD2Q9BXW9 1451 aa6.04□□□□□ -1.44
HMGB3P13-201ENST00000511263 BUB1BO60566 1050 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P13-201ENST00000511263 FPR2P25090 351 aa6.04□□□□□ -1.44
HMGB3P13-201ENST00000511263 GRK2P25098 689 aa6.04□□□□□ -1.44
HMGB3P13-201ENST00000511263 GRK3P35626 688 aa6.04□□□□□ -1.44
HMGB3P13-201ENST00000511263 PAK1Q13153 545 aa6.04□□□□□ -1.44
HMGB3P13-201ENST00000511263 STEAP3Q658P3 488 aa6.04□□□□□ -1.44
HMGB3P13-201ENST00000511263 ETV3LQ6ZN32 361 aa6.04□□□□□ -1.44
HMGB3P13-201ENST00000511263 MILR1Q7Z6M3 343 aa6.04□□□□□ -1.44
HMGB3P13-201ENST00000511263 CPA5Q8WXQ8 436 aa6.04□□□□□ -1.44
HMGB3P13-201ENST00000511263 MRPL4Q9BYD3 311 aaKnown RBP6.04□□□□□ -1.44
HMGB3P13-201ENST00000511263 EEA1Q15075 1411 aa6.04□□□□□ -1.44
HMGB3P13-201ENST00000511263 IRS2Q9Y4H2 1338 aa6.03□□□□□ -1.44
HMGB3P13-201ENST00000511263 GNAT1P11488 350 aa6.03□□□□□ -1.44
HMGB3P13-201ENST00000511263 CDR1P51861 262 aa6.03□□□□□ -1.44
HMGB3P13-201ENST00000511263 ST5P78524 1137 aa6.03□□□□□ -1.44
HMGB3P13-201ENST00000511263 FAM209AQ5JX71 171 aa6.03□□□□□ -1.44
HMGB3P13-201ENST00000511263 YOD1Q5VVQ6 348 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P13-201ENST00000511263 TCERG1LQ5VWI1 586 aa6.03□□□□□ -1.44
HMGB3P13-201ENST00000511263 DENND5AQ6IQ26 1287 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms