RNA–Protein interactions for RNA: ENST00000510948.1

SMAD1-208, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-208ENST00000510948 CDKAL1Q5VV42 579 aa5.74□□□□□ -1.49
SMAD1-208ENST00000510948 ZCCHC8Q6NZY4 707 aaKnown RBP5.74□□□□□ -1.49
SMAD1-208ENST00000510948 ARHGAP27Q6ZUM4 889 aa5.74□□□□□ -1.49
SMAD1-208ENST00000510948 MTDHQ86UE4 582 aaKnown RBP5.74□□□□□ -1.49
SMAD1-208ENST00000510948 ANKLE2Q86XL3 938 aa5.74□□□□□ -1.49
SMAD1-208ENST00000510948 KSR1Q8IVT5 923 aa5.74□□□□□ -1.49
SMAD1-208ENST00000510948 WDR66Q8TBY9 1149 aa5.74□□□□□ -1.49
SMAD1-208ENST00000510948 DCAF5Q96JK2 942 aa5.74□□□□□ -1.49
SMAD1-208ENST00000510948 ORAI3Q9BRQ5 295 aa5.74□□□□□ -1.49
SMAD1-208ENST00000510948 CLEC1BQ9P126 229 aa5.74□□□□□ -1.49
SMAD1-208ENST00000510948 G3BP2Q9UN86 482 aaKnown RBP5.74□□□□□ -1.49
SMAD1-208ENST00000510948 IQGAP1P46940 1657 aa5.74□□□□□ -1.49
SMAD1-208ENST00000510948 TMEM131LA2VDJ0 1609 aa5.74□□□□□ -1.49
SMAD1-208ENST00000510948 MYO3AQ8NEV4 1616 aa5.74□□□□□ -1.49
SMAD1-208ENST00000510948 NEXMIFQ5QGS0 1516 aa5.74□□□□□ -1.49
SMAD1-208ENST00000510948 ZNF142P52746 1687 aaPredicted RBP5.73□□□□□ -1.49
SMAD1-208ENST00000510948 ADAMTSL3P82987 1691 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 RIMS1Q86UR5 1692 aaKnown RBP5.73□□□□□ -1.49
SMAD1-208ENST00000510948 WASH4PA8MWX3 477 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 BRINP1O60477 761 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 TPP2P29144 1249 aaPredicted RBP5.73□□□□□ -1.49
SMAD1-208ENST00000510948 GUCY2FP51841 1108 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 NFIAQ12857 509 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 SEPT7Q16181 437 aaKnown RBP5.73□□□□□ -1.49
SMAD1-208ENST00000510948 RTP2Q5QGT7 225 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 ODR4Q5SWX8 454 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 LBX2Q6XYB7 198 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 NOL8Q76FK4 1167 aaKnown RBP5.73□□□□□ -1.49
SMAD1-208ENST00000510948 THAP5Q7Z6K1 395 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 DDX53Q86TM3 631 aaKnown RBP5.73□□□□□ -1.49
SMAD1-208ENST00000510948 KIF18BQ86Y91 864 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 CCDC103Q8IW40 242 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 SPACA3Q8IXA5 215 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.73□□□□□ -1.49
SMAD1-208ENST00000510948 DIO2Q92813 273 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 UBE2FQ969M7 185 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 HSPA12BQ96MM6 686 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 MMP19Q99542 508 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 METTL22Q9BUU2 404 aaPredicted RBP5.73□□□□□ -1.49
SMAD1-208ENST00000510948 ATG3Q9NT62 314 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 SAMD15Q9P1V8 674 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 ZSWIM5Q9P217 1185 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 CHPF2Q9P2E5 772 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 TCFL5Q9UL49 500 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 PRAG1Q86YV5 1406 aa5.73□□□□□ -1.49
SMAD1-208ENST00000510948 NRXN1Q9ULB1 1477 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 UBR1Q8IWV7 1749 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 TRBV23OR9-2A0A075B6M9 112 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 RNF225M0QZC1 329 aaPredicted RBP5.72□□□□□ -1.49
SMAD1-208ENST00000510948 ARVCFO00192 962 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 MSCO60682 206 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 LCP1P13796 627 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 PAMP19021 973 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 SCNN1BP51168 640 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 KCNAB2Q13303 367 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 GAB4Q2WGN9 574 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 PIK3R6Q5UE93 754 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 RNF219Q5W0B1 726 aaPredicted RBP5.72□□□□□ -1.49
SMAD1-208ENST00000510948 ABHD17CQ6PCB6 329 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 RNF111Q6ZNA4 994 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 ZC3H7AQ8IWR0 971 aaKnown RBP5.72□□□□□ -1.49
SMAD1-208ENST00000510948 FAM181AQ8N9Y4 354 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 RCBTB1Q8NDN9 531 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 OR2W6PQ8NHA6 318 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 JDP2Q8WYK2 163 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 TTC1Q99614 292 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 DBNDD2Q9BQY9 259 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 OSBPL1AQ9BXW6 950 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 FOXP3Q9BZS1 431 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 PLAGL2Q9UPG8 496 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 U3KQE9 123 aa5.72□□□□□ -1.49
SMAD1-208ENST00000510948 SETD1AO15047 1707 aaKnown RBP5.71□□□□□ -1.49
SMAD1-208ENST00000510948 NPHP3-ACAD11A0A0J9YXS1 232 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 WDR64B1ANS9 1081 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 H3BS24 57 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 FGF10O15520 208 aaPredicted RBP5.71□□□□□ -1.5
SMAD1-208ENST00000510948 ZEB2O60315 1214 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 CEACAM5P06731 702 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 ENDOUP21128 410 aaKnown RBP5.71□□□□□ -1.5
SMAD1-208ENST00000510948 CLCN7P51798 805 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 PAK1Q13153 545 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 STAT4Q14765 748 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 CCDC181Q5TID7 509 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 GGT6Q6P531 493 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 NECAB2Q7Z6G3 386 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 PCDH19Q8TAB3 1148 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 USP7Q93009 1102 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 PTCHD1Q96NR3 888 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 ALG1Q9BT22 464 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 IFT22Q9H7X7 185 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.71□□□□□ -1.5
SMAD1-208ENST00000510948 SEMA3GQ9NS98 782 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 AP5S1Q9NUS5 200 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 SLC5A4Q9NY91 659 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 DUSP13Q9UII6 198 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 SNX11Q9Y5W9 270 aa5.71□□□□□ -1.5
SMAD1-208ENST00000510948 GSC2O15499 205 aa5.7□□□□□ -1.5
SMAD1-208ENST00000510948 GPR39O43194 453 aa5.7□□□□□ -1.5
SMAD1-208ENST00000510948 TBC1D8O95759 1140 aa5.7□□□□□ -1.5
SMAD1-208ENST00000510948 IGLV1-40P01703 118 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms