RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 PCDHA11Q9Y5I1 949 aa11.72□□□□□ -0.53
SCARB2-204ENST00000509994 TET1Q8NFU7 2136 aa11.72□□□□□ -0.53
SCARB2-204ENST00000509994 KIF28PB7ZC32 967 aa11.71□□□□□ -0.53
SCARB2-204ENST00000509994 MCM5P33992 734 aa11.71□□□□□ -0.53
SCARB2-204ENST00000509994 SP4Q02446 784 aa11.71□□□□□ -0.53
SCARB2-204ENST00000509994 SKIV2LQ15477 1246 aaKnown RBP11.71□□□□□ -0.53
SCARB2-204ENST00000509994 LRRC8DQ7L1W4 858 aa11.71□□□□□ -0.53
SCARB2-204ENST00000509994 RAB11FIP4Q86YS3 637 aa11.71□□□□□ -0.53
SCARB2-204ENST00000509994 SAMD3Q8N6K7 520 aa11.71□□□□□ -0.53
SCARB2-204ENST00000509994 AFAP1L1Q8TED9 768 aa11.71□□□□□ -0.53
SCARB2-204ENST00000509994 MTMR8Q96EF0 704 aa11.71□□□□□ -0.53
SCARB2-204ENST00000509994 SLC9A7Q96T83 725 aa11.71□□□□□ -0.53
SCARB2-204ENST00000509994 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
SCARB2-204ENST00000509994 RIOX1Q9H6W3 641 aa11.71□□□□□ -0.53
SCARB2-204ENST00000509994 CERS4Q9HA82 394 aa11.71□□□□□ -0.53
SCARB2-204ENST00000509994 CHD7Q9P2D1 2997 aa11.71□□□□□ -0.54
SCARB2-204ENST00000509994 CYTH3O43739 400 aa11.7□□□□□ -0.54
SCARB2-204ENST00000509994 DDAH1O94760 285 aa11.7□□□□□ -0.54
SCARB2-204ENST00000509994 CA3P07451 260 aa11.7□□□□□ -0.54
SCARB2-204ENST00000509994 SELPP16109 830 aa11.7□□□□□ -0.54
SCARB2-204ENST00000509994 UBA1P22314 1058 aaKnown RBP11.7□□□□□ -0.54
SCARB2-204ENST00000509994 ANTXR2P58335 489 aa11.7□□□□□ -0.54
SCARB2-204ENST00000509994 TROAPQ12815 778 aa11.7□□□□□ -0.54
SCARB2-204ENST00000509994 CELF3Q5SZQ8 465 aaKnown RBP11.7□□□□□ -0.54
SCARB2-204ENST00000509994 MB21D2Q8IYB1 491 aaPredicted RBP11.7□□□□□ -0.54
SCARB2-204ENST00000509994 SYMPKQ92797 1274 aaKnown RBP11.7□□□□□ -0.54
SCARB2-204ENST00000509994 KAT2BQ92831 832 aa11.7□□□□□ -0.54
SCARB2-204ENST00000509994 MAP4K1Q92918 833 aa11.7□□□□□ -0.54
SCARB2-204ENST00000509994 EMID1Q96A84 441 aaPredicted RBP11.7□□□□□ -0.54
SCARB2-204ENST00000509994 RTEL1Q9NZ71 1219 aa11.7□□□□□ -0.54
SCARB2-204ENST00000509994 GTF2IRD1Q9UHL9 959 aa11.7□□□□□ -0.54
SCARB2-204ENST00000509994 PTPRSQ13332 1948 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 GTPBP6O43824 516 aaPredicted RBP11.69□□□□□ -0.54
SCARB2-204ENST00000509994 TLL1O43897 1013 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 BAIAP3O94812 1187 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 F2P00734 622 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 CKBP12277 381 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 RXRAP19793 462 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 GNAQP50148 359 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 SLC35G1Q2M3R5 365 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 HSDL1Q3SXM5 330 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 MYSM1Q5VVJ2 828 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 SYNE3Q6ZMZ3 975 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 VSIG10LQ86VR7 867 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 SESTD1Q86VW0 696 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 CCDC82Q8N4S0 544 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 IGDCC4Q8TDY8 1250 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 ARNTL2Q8WYA1 636 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 GPKOWQ92917 476 aaPredicted RBP eCLIP11.69□□□□□ -0.54
SCARB2-204ENST00000509994 TMEM87BQ96K49 555 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 ESYT1Q9BSJ8 1104 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 LRRC2Q9BYS8 371 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 LY9Q9HBG7 655 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 PRDM6Q9NQX0 595 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 THEGQ9P2T0 379 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 NAP1L2Q9ULW6 460 aaPredicted RBP11.69□□□□□ -0.54
SCARB2-204ENST00000509994 SLC12A7Q9Y666 1083 aa11.69□□□□□ -0.54
SCARB2-204ENST00000509994 C17orf102A2RUQ5 167 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 SLC27A2O14975 620 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 PPFIA4O75335 1185 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 RGS20O76081 388 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 PLEKHA8P1O95397 391 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 PARNO95453 639 aaKnown RBP11.68□□□□□ -0.54
SCARB2-204ENST00000509994 CALM1P0DP23 149 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 CALM2P0DP24 149 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 CALM3P0DP25 149 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 TGFB3P10600 412 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 THPOP40225 353 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 ZNF200P98182 395 aaPredicted RBP11.68□□□□□ -0.54
SCARB2-204ENST00000509994 GHRHRQ02643 423 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 PTK7Q13308 1070 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 ADGRE1Q14246 886 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 TJAP1Q5JTD0 557 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 UTP14CQ5TAP6 766 aaKnown RBP11.68□□□□□ -0.54
SCARB2-204ENST00000509994 RNF20Q5VTR2 975 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 FAM117BQ6P1L5 589 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 CNKSR3Q6P9H4 555 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 USP17L6PQ6QN14 398 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 CYFIP1Q7L576 1253 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 MICU3Q86XE3 530 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 HERC6Q8IVU3 1022 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 CMTR1Q8N1G2 835 aaKnown RBP11.68□□□□□ -0.54
SCARB2-204ENST00000509994 TMTC2Q8N394 836 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 DHX38Q92620 1227 aaKnown RBP11.68□□□□□ -0.54
SCARB2-204ENST00000509994 ATP6V0A1Q93050 837 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 LZTS2Q9BRK4 669 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 SPZ1Q9BXG8 430 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 FOXD4L1Q9NU39 408 aa11.68□□□□□ -0.54
SCARB2-204ENST00000509994 COL4A4P53420 1690 aaPredicted RBP11.68□□□□□ -0.54
SCARB2-204ENST00000509994 hCG_1642624A0A1W2PR95 340 aa11.67□□□□□ -0.54
SCARB2-204ENST00000509994 H3BRB1 525 aa11.67□□□□□ -0.54
SCARB2-204ENST00000509994 SH2B2O14492 632 aaPredicted RBP11.67□□□□□ -0.54
SCARB2-204ENST00000509994 FIBPO43427 364 aa11.67□□□□□ -0.54
SCARB2-204ENST00000509994 STAM2O75886 525 aa11.67□□□□□ -0.54
SCARB2-204ENST00000509994 WDR5P61964 334 aaKnown RBP11.67□□□□□ -0.54
SCARB2-204ENST00000509994 FGD1P98174 961 aa11.67□□□□□ -0.54
SCARB2-204ENST00000509994 SP2Q02086 613 aa11.67□□□□□ -0.54
SCARB2-204ENST00000509994 IKBKEQ14164 716 aa11.67□□□□□ -0.54
SCARB2-204ENST00000509994 NEDD9Q14511 834 aa11.67□□□□□ -0.54
SCARB2-204ENST00000509994 CREB3L3Q68CJ9 461 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms