RNA–Protein interactions for RNA: ENST00000509535.5

RACK1-222, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-222	ENST00000509535	TTLL1	O95922	423 aa		10.12	□□□□□ -0.79
RACK1-222	ENST00000509535	TXN	P10599	105 aa	Known RBP	10.12	□□□□□ -0.79
RACK1-222	ENST00000509535	GTF2F1	P35269	517 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
RACK1-222	ENST00000509535	MKRN4P	Q13434	485 aa	Predicted RBP	10.12	□□□□□ -0.79
RACK1-222	ENST00000509535	BAAT	Q14032	418 aa	Predicted RBP	10.12	□□□□□ -0.79
RACK1-222	ENST00000509535	PWP2	Q15269	919 aa	Known RBP	10.12	□□□□□ -0.79
RACK1-222	ENST00000509535	UBE3C	Q15386	1083 aa		10.12	□□□□□ -0.79
RACK1-222	ENST00000509535	ZNF618	Q5T7W0	954 aa		10.12	□□□□□ -0.79
RACK1-222	ENST00000509535	TRAF7	Q6Q0C0	670 aa		10.12	□□□□□ -0.79
RACK1-222	ENST00000509535	DBF4B	Q8NFT6	615 aa		10.12	□□□□□ -0.79
RACK1-222	ENST00000509535	STAG1	Q8WVM7	1258 aa		10.12	□□□□□ -0.79
RACK1-222	ENST00000509535	ASIC4	Q96FT7	647 aa		10.12	□□□□□ -0.79
RACK1-222	ENST00000509535	PUS7L	Q9H0K6	701 aa	Known RBP	10.12	□□□□□ -0.79
RACK1-222	ENST00000509535	IGFLR1	Q9H665	355 aa		10.12	□□□□□ -0.79
RACK1-222	ENST00000509535	CCPG1	Q9ULG6	757 aa		10.12	□□□□□ -0.79
RACK1-222	ENST00000509535	SYNPO2	Q9UMS6	1093 aa		10.12	□□□□□ -0.79
RACK1-222	ENST00000509535	PLXNA4	Q9HCM2	1894 aa		10.12	□□□□□ -0.79
RACK1-222	ENST00000509535	PRDM1	O75626	825 aa		10.11	□□□□□ -0.79
RACK1-222	ENST00000509535	UPP2	O95045	317 aa		10.11	□□□□□ -0.79
RACK1-222	ENST00000509535	ZFY	P08048	801 aa	Predicted RBP	10.11	□□□□□ -0.79
RACK1-222	ENST00000509535	CTNNB1	P35222	781 aa		10.11	□□□□□ -0.79
RACK1-222	ENST00000509535	NBL1	P41271	181 aa		10.11	□□□□□ -0.79
RACK1-222	ENST00000509535	PDE4B	Q07343	736 aa		10.11	□□□□□ -0.79
RACK1-222	ENST00000509535	PDE4D	Q08499	809 aa		10.11	□□□□□ -0.79
RACK1-222	ENST00000509535	TRIM71	Q2Q1W2	868 aa	Known RBP	10.11	□□□□□ -0.79
RACK1-222	ENST00000509535	SBK1	Q52WX2	424 aa		10.11	□□□□□ -0.79
RACK1-222	ENST00000509535	BMP2KL	Q5H9B9	411 aa		10.11	□□□□□ -0.79
RACK1-222	ENST00000509535	KAT2B	Q92831	832 aa		10.11	□□□□□ -0.79
RACK1-222	ENST00000509535	WNT8B	Q93098	351 aa		10.11	□□□□□ -0.79
RACK1-222	ENST00000509535	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
RACK1-222	ENST00000509535	HDAC6	Q9UBN7	1215 aa		10.11	□□□□□ -0.79
RACK1-222	ENST00000509535	GTF2IRD1	Q9UHL9	959 aa		10.11	□□□□□ -0.79
RACK1-222	ENST00000509535	LOXHD1	Q8IVV2	1947 aa		10.11	□□□□□ -0.79
RACK1-222	ENST00000509535	TTC3	P53804	2025 aa		10.11	□□□□□ -0.79
RACK1-222	ENST00000509535	EMSY	Q7Z589	1322 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	PTPDC1	A2A3K4	754 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	MINDY4B	A8MYZ0	360 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	NFIB	O00712	420 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	GRM6	O15303	877 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	RNF113A	O15541	343 aa	Known RBP	10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	GALR2	O43603	387 aa	Predicted RBP	10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	CSPG5	O95196	566 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	EYA4	O95677	639 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	MMP3	P08254	477 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	SDS	P20132	328 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	MCC	P23508	829 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	SLC1A4	P43007	532 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	NDUFV1	P49821	464 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	PTK7	Q13308	1070 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	ADAM15	Q13444	863 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	CBX2	Q14781	532 aa	Predicted RBP	10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	ZSCAN25	Q6NSZ9	544 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	KCTD1	Q719H9	257 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	C7orf31	Q8N865	590 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	AFG1L	Q8WV93	481 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	TOP1MT	Q969P6	601 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	OSBP2	Q969R2	916 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	GMCL1	Q96IK5	515 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	MSLNL	Q96KJ4	702 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	LMAN2L	Q9H0V9	348 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	PRR12	Q9ULL5	1215 aa		10.1	□□□□□ -0.79
RACK1-222	ENST00000509535	CFAP47	Q6ZTR5	3102 aa		10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	CHD8	Q9HCK8	2581 aa		10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	MED19	A0JLT2	244 aa	Predicted RBP	10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	C5orf67	F2Z3F1	127 aa		10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	PLA2G6	O60733	806 aa		10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	ARIH2	O95376	493 aa		10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	PDGFB	P01127	241 aa	Predicted RBP	10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	ICAM1	P05362	532 aa		10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	CALML3	P27482	149 aa		10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	NUBP1	P53384	320 aa		10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	PLEKHG4	Q58EX7	1191 aa		10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	ZMYM1	Q5SVZ6	1142 aa		10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	SLC30A10	Q6XR72	485 aa		10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	ADSSL1	Q8N142	457 aa		10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	SMRP1	Q8NCR6	262 aa		10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	NKD2	Q969F2	451 aa	Predicted RBP	10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	MPHOSPH6	Q99547	160 aa	Known RBP	10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	C11orf84	Q9BUA3	381 aa	Predicted RBP	10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	INCENP	Q9NQS7	918 aa		10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	PLIN4	Q96Q06	1357 aa		10.09	□□□□□ -0.79
RACK1-222	ENST00000509535	DOCK5	Q9H7D0	1870 aa		10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	GSG1L2	A8MUP6	293 aa		10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	TRIM6-TRIM34	B2RNG4	842 aa		10.08	□□□□□ -0.8
RACK1-222	ENST00000509535		M0R2C6	588 aa		10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	RB1	P06400	928 aa		10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	CAST	P20810	708 aa	Known RBP	10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	EDNRB	P24530	442 aa		10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	PSEN2	P49810	448 aa		10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	ZNF200	P98182	395 aa	Predicted RBP	10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	RCSD1	Q6JBY9	416 aa		10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	RASGRP2	Q7LDG7	609 aa		10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	CHST3	Q7LGC8	479 aa		10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	FRMD5	Q7Z6J6	570 aa		10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	FIBCD1	Q8N539	461 aa		10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	APPBP2	Q92624	585 aa		10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	RPGRIP1	Q96KN7	1286 aa		10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	STRBP	Q96SI9	672 aa	Known RBP	10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	ALG1	Q9BT22	464 aa		10.08	□□□□□ -0.8

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