RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, humanhuman

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-208ENST00000509177 CALM1P0DP23 149 aa12.53□□□□□ -0.4
TUSC3-208ENST00000509177 CALM2P0DP24 149 aa12.53□□□□□ -0.4
TUSC3-208ENST00000509177 CALM3P0DP25 149 aa12.53□□□□□ -0.4
TUSC3-208ENST00000509177 HSD17B4P51659 736 aa12.53□□□□□ -0.4
TUSC3-208ENST00000509177 PURAQ00577 322 aaKnown RBP12.53□□□□□ -0.4
TUSC3-208ENST00000509177 SAMD3Q8N6K7 520 aa12.53□□□□□ -0.4
TUSC3-208ENST00000509177 CUL5Q93034 780 aa12.53□□□□□ -0.4
TUSC3-208ENST00000509177 NEK1Q96PY6 1258 aa12.53□□□□□ -0.4
TUSC3-208ENST00000509177 MAP3K14Q99558 947 aa12.53□□□□□ -0.4
TUSC3-208ENST00000509177 MTCH2Q9Y6C9 303 aa12.53□□□□□ -0.4
TUSC3-208ENST00000509177 EPOPA6NHQ4 379 aa12.52□□□□□ -0.41
TUSC3-208ENST00000509177 A6NJR5 290 aa12.52□□□□□ -0.41
TUSC3-208ENST00000509177 SUPT20HL2P0C7V6 817 aa12.52□□□□□ -0.41
TUSC3-208ENST00000509177 CYP2C9P11712 490 aa12.52□□□□□ -0.41
TUSC3-208ENST00000509177 RXRAP19793 462 aa12.52□□□□□ -0.41
TUSC3-208ENST00000509177 POU3F3P20264 500 aaPredicted RBP12.52□□□□□ -0.41
TUSC3-208ENST00000509177 LIFRP42702 1097 aa12.52□□□□□ -0.41
TUSC3-208ENST00000509177 SLC35G1Q2M3R5 365 aa12.52□□□□□ -0.41
TUSC3-208ENST00000509177 NBPF20Q3BBV1 942 aa12.52□□□□□ -0.41
TUSC3-208ENST00000509177 KRT40Q6A162 431 aa12.52□□□□□ -0.41
TUSC3-208ENST00000509177 CCDC62Q6P9F0 684 aa12.52□□□□□ -0.41
TUSC3-208ENST00000509177 RAB11FIP4Q86YS3 637 aa12.52□□□□□ -0.41
TUSC3-208ENST00000509177 AFG1LQ8WV93 481 aa12.52□□□□□ -0.41
TUSC3-208ENST00000509177 C1QTNF1Q9BXJ1 281 aa12.52□□□□□ -0.41
TUSC3-208ENST00000509177 CERS4Q9HA82 394 aa12.52□□□□□ -0.41
TUSC3-208ENST00000509177 NOD1Q9Y239 953 aa12.52□□□□□ -0.41
TUSC3-208ENST00000509177 BAZ2BQ9UIF8 2168 aaKnown RBP12.52□□□□□ -0.41
TUSC3-208ENST00000509177 SCN5AQ14524 2016 aa12.51□□□□□ -0.41
TUSC3-208ENST00000509177 OPLAHO14841 1288 aa12.51□□□□□ -0.41
TUSC3-208ENST00000509177 ARHGEF15O94989 841 aa12.51□□□□□ -0.41
TUSC3-208ENST00000509177 PLEKHA8P1O95397 391 aa12.51□□□□□ -0.41
TUSC3-208ENST00000509177 PFKMP08237 780 aa12.51□□□□□ -0.41
TUSC3-208ENST00000509177 CASTP20810 708 aaKnown RBP12.51□□□□□ -0.41
TUSC3-208ENST00000509177 SMARCA1P28370 1054 aa12.51□□□□□ -0.41
TUSC3-208ENST00000509177 CCND2P30279 289 aa12.51□□□□□ -0.41
TUSC3-208ENST00000509177 FGD1P98174 961 aa12.51□□□□□ -0.41
TUSC3-208ENST00000509177 LAMC2Q13753 1193 aa12.51□□□□□ -0.41
TUSC3-208ENST00000509177 KRT32Q14532 448 aa12.51□□□□□ -0.41
TUSC3-208ENST00000509177 PGM5Q15124 567 aa12.51□□□□□ -0.41
TUSC3-208ENST00000509177 SKIV2LQ15477 1246 aaKnown RBP12.51□□□□□ -0.41
TUSC3-208ENST00000509177 AAK1Q2M2I8 961 aa12.51□□□□□ -0.41
TUSC3-208ENST00000509177 DEFB128Q7Z7B8 93 aa12.51□□□□□ -0.41
TUSC3-208ENST00000509177 DHX37Q8IY37 1157 aaKnown RBP12.51□□□□□ -0.41
TUSC3-208ENST00000509177 CCDC82Q8N4S0 544 aa12.51□□□□□ -0.41
TUSC3-208ENST00000509177 SMARCC2Q8TAQ2 1214 aa12.51□□□□□ -0.41
TUSC3-208ENST00000509177 PDCD2LQ9BRP1 358 aa12.51□□□□□ -0.41
TUSC3-208ENST00000509177 SPZ1Q9BXG8 430 aa12.51□□□□□ -0.41
TUSC3-208ENST00000509177 DDX41Q9UJV9 622 aaKnown RBP12.51□□□□□ -0.41
TUSC3-208ENST00000509177 NAP1L2Q9ULW6 460 aaPredicted RBP12.51□□□□□ -0.41
TUSC3-208ENST00000509177 GHRHRQ02643 423 aa12.5□□□□□ -0.41
TUSC3-208ENST00000509177 ARHGAP1Q07960 439 aa12.5□□□□□ -0.41
TUSC3-208ENST00000509177 DGKDQ16760 1214 aa12.5□□□□□ -0.41
TUSC3-208ENST00000509177 KCNV1Q6PIU1 500 aa12.5□□□□□ -0.41
TUSC3-208ENST00000509177 VSIG10LQ86VR7 867 aa12.5□□□□□ -0.41
TUSC3-208ENST00000509177 MICU3Q86XE3 530 aa12.5□□□□□ -0.41
TUSC3-208ENST00000509177 CMTR1Q8N1G2 835 aaKnown RBP12.5□□□□□ -0.41
TUSC3-208ENST00000509177 FANCBQ8NB91 859 aa12.5□□□□□ -0.41
TUSC3-208ENST00000509177 PPP1R13LQ8WUF5 828 aa12.5□□□□□ -0.41
TUSC3-208ENST00000509177 EPHX3Q9H6B9 360 aa12.5□□□□□ -0.41
TUSC3-208ENST00000509177 MYH6P13533 1939 aa12.49□□□□□ -0.41
TUSC3-208ENST00000509177 TLL1O43897 1013 aa12.49□□□□□ -0.41
TUSC3-208ENST00000509177 SORBS3O60504 671 aa12.49□□□□□ -0.41
TUSC3-208ENST00000509177 MMP3P08254 477 aa12.49□□□□□ -0.41
TUSC3-208ENST00000509177 TAP1Q03518 808 aa12.49□□□□□ -0.41
TUSC3-208ENST00000509177 GNPTABQ3T906 1256 aa12.49□□□□□ -0.41
TUSC3-208ENST00000509177 NFRKBQ6P4R8 1299 aa12.49□□□□□ -0.41
TUSC3-208ENST00000509177 DHX32Q7L7V1 743 aaKnown RBP12.49□□□□□ -0.41
TUSC3-208ENST00000509177 SRBD1Q8N5C6 995 aaKnown RBP12.49□□□□□ -0.41
TUSC3-208ENST00000509177 RETREG2Q8NC44 543 aa12.49□□□□□ -0.41
TUSC3-208ENST00000509177 ZFP91Q96JP5 570 aaPredicted RBP12.49□□□□□ -0.41
TUSC3-208ENST00000509177 TCEANC2Q96MN5 208 aa12.49□□□□□ -0.41
TUSC3-208ENST00000509177 LRFN3Q9BTN0 628 aa12.49□□□□□ -0.41
TUSC3-208ENST00000509177 MLXIPQ9HAP2 919 aa12.49□□□□□ -0.41
TUSC3-208ENST00000509177 hCG_1642624A0A1W2PR95 340 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 GTPBP6O43824 516 aaPredicted RBP12.48□□□□□ -0.41
TUSC3-208ENST00000509177 ABCB7O75027 752 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 GGPS1O95749 300 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 HMGB1P09429 215 aaKnown RBP12.48□□□□□ -0.41
TUSC3-208ENST00000509177 TGFB3P10600 412 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 PTPN11Q06124 597 aaPredicted RBP12.48□□□□□ -0.41
TUSC3-208ENST00000509177 COL9A3Q14050 684 aaPredicted RBP12.48□□□□□ -0.41
TUSC3-208ENST00000509177 USP17L6PQ6QN14 398 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 HEATR3Q7Z4Q2 680 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 SPRED2Q7Z698 418 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 SGMS1Q86VZ5 419 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 HERC6Q8IVU3 1022 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 RASEFQ8IZ41 740 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 C7orf31Q8N865 590 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 IL31RAQ8NI17 732 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 PHOSPHO2Q8TCD6 241 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 ARNTL2Q8WYA1 636 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 SPATA33Q96N06 139 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 SLC9A7Q96T83 725 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 ALG1Q9BT22 464 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 PSTPIP2Q9H939 334 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 COG5Q9UP83 839 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 SCN10AQ9Y5Y9 1956 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 BRWD1Q9NSI6 2320 aa12.48□□□□□ -0.41
TUSC3-208ENST00000509177 TET1Q8NFU7 2136 aa12.47□□□□□ -0.41
TUSC3-208ENST00000509177 PITPNM1O00562 1244 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms