RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 RNF207Q6ZRF8 634 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 EEPD1Q7L9B9 569 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 TRMT44Q8IYL2 757 aaKnown RBP8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 FANCBQ8NB91 859 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 COPS5Q92905 334 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 PAWRQ96IZ0 340 aaKnown RBP8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 AIFM3Q96NN9 605 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 ZHX1Q9UKY1 873 aaPredicted RBP8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 TPCN1Q9ULQ1 816 aa8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 GNEQ9Y223 722 aaKnown RBP8.35□□□□□ -1.07
TOPBP1-207ENST00000509162 PNMA6FA0A0J9YX94 578 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 RBM47A0AV96 593 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 SPTLC1O15269 473 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 CD46P15529 392 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 SMPD1P17405 629 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 RCAN1P53805 252 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 AK2P54819 239 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 SCRN1Q12765 414 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 ACVR2BQ13705 512 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 LRRC41Q15345 812 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 LRRC26Q2I0M4 334 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 CCDC144BQ3MJ40 725 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 USP17L6PQ6QN14 398 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 MSL3Q8N5Y2 521 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 RGS22Q8NE09 1264 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 CTCFLQ8NI51 663 aaPredicted RBP8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 SPIRE2Q8WWL2 714 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 PHKBQ93100 1093 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 DDX11Q96FC9 970 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 PGBD1Q96JS3 809 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 PDCD2LQ9BRP1 358 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 TRAIPQ9BWF2 469 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 AMNQ9BXJ7 453 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 UPF3AQ9H1J1 476 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 BCAS3Q9H6U6 928 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 PXMP2Q9NR77 195 aa8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 CTDP1Q9Y5B0 961 aaPredicted RBP8.34□□□□□ -1.07
TOPBP1-207ENST00000509162 EIF2AK2P19525 551 aaKnown RBP8.33□□□□□ -1.08
TOPBP1-207ENST00000509162 SMARCA1P28370 1054 aa8.33□□□□□ -1.08
TOPBP1-207ENST00000509162 METAP2P50579 478 aaKnown RBP eCLIP8.33□□□□□ -1.08
TOPBP1-207ENST00000509162 ANAPC15P60006 121 aa8.33□□□□□ -1.08
TOPBP1-207ENST00000509162 NKX3-2P78367 333 aa8.33□□□□□ -1.08
TOPBP1-207ENST00000509162 CCT2P78371 535 aaKnown RBP8.33□□□□□ -1.08
TOPBP1-207ENST00000509162 MRPS9P82933 396 aaKnown RBP8.33□□□□□ -1.08
TOPBP1-207ENST00000509162 SWT1Q5T5J6 900 aaKnown RBP8.33□□□□□ -1.08
TOPBP1-207ENST00000509162 KLHDC9Q8NEP7 349 aa8.33□□□□□ -1.08
TOPBP1-207ENST00000509162 PPP1R13LQ8WUF5 828 aa8.33□□□□□ -1.08
TOPBP1-207ENST00000509162 GJB4Q9NTQ9 266 aa8.33□□□□□ -1.08
TOPBP1-207ENST00000509162 NRBP1Q9UHY1 535 aa8.33□□□□□ -1.08
TOPBP1-207ENST00000509162 PCDHA1Q9Y5I3 950 aa8.33□□□□□ -1.08
TOPBP1-207ENST00000509162 SCN10AQ9Y5Y9 1956 aa8.33□□□□□ -1.08
TOPBP1-207ENST00000509162 GRIN2DO15399 1336 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 CFBP00751 764 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 HMGB1P09429 215 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 CALM1P0DP23 149 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 CALM2P0DP24 149 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 CALM3P0DP25 149 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 AKR1A1P14550 325 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 CNGA1P29973 690 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 KIF5BP33176 963 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 RBM25P49756 843 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 BEX3Q00994 111 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 MLLT1Q03111 559 aaPredicted RBP8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 STK3Q13188 491 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 SNX17Q15036 470 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 PGM5Q15124 567 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 ME3Q16798 604 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 TJAP1Q5JTD0 557 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 CCDC62Q6P9F0 684 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 NOL8Q76FK4 1167 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 HEATR3Q7Z4Q2 680 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 NECAB1Q8N987 351 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 RRP36Q96EU6 259 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 IL21Q9HBE4 155 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 XPNPEP3Q9NQH7 507 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 PDRG1Q9NUG6 133 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 TMEM260Q9NX78 707 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 MRPL11Q9Y3B7 192 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 CYP46A1Q9Y6A2 500 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 CDH23Q9H251 3354 aa8.32□□□□□ -1.08
TOPBP1-207ENST00000509162 MYH7BA7E2Y1 1941 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 RCCD1A6NED2 376 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 PIK3CDO00329 1044 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 DNM1LO00429 736 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 JAK2O60674 1132 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 RNF40O75150 1001 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 TFRCP02786 760 aaKnown RBP8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 FDPSP14324 419 aaKnown RBP8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 IFNAR1P17181 557 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 DNAJB2P25686 324 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 CST5P28325 142 aaPredicted RBP8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 GJA9P57773 515 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 ARHGAP1Q07960 439 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 PFKFB3Q16875 520 aaPredicted RBP8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 TLK2Q86UE8 772 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 TMTC2Q8N394 836 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 ANKLE1Q8NAG6 615 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 DNERQ8NFT8 737 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 RASGRP4Q8TDF6 673 aa8.31□□□□□ -1.08
TOPBP1-207ENST00000509162 CRYGNQ8WXF5 182 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms