RNA–Protein interactions for RNA: ENST00000508075.1

NEDD4-207, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 965 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-207ENST00000508075 MFSD10Q14728 455 aa16.66■□□□□ 0.26
NEDD4-207ENST00000508075 CCDC85BQ15834 202 aaPredicted RBP16.66■□□□□ 0.26
NEDD4-207ENST00000508075 UBE2SQ16763 222 aa16.66■□□□□ 0.26
NEDD4-207ENST00000508075 ADCK5Q3MIX3 580 aa16.66■□□□□ 0.26
NEDD4-207ENST00000508075 SPRED2Q7Z698 418 aa16.66■□□□□ 0.26
NEDD4-207ENST00000508075 MICU3Q86XE3 530 aa16.66■□□□□ 0.26
NEDD4-207ENST00000508075 SPATA33Q96N06 139 aa16.66■□□□□ 0.26
NEDD4-207ENST00000508075 CERS4Q9HA82 394 aa16.66■□□□□ 0.26
NEDD4-207ENST00000508075 SLC4A7Q9Y6M7 1214 aa16.66■□□□□ 0.26
NEDD4-207ENST00000508075 RFXAPO00287 272 aa16.65■□□□□ 0.26
NEDD4-207ENST00000508075 DDAH1O94760 285 aa16.65■□□□□ 0.26
NEDD4-207ENST00000508075 ARHGEF15O94989 841 aa16.65■□□□□ 0.26
NEDD4-207ENST00000508075 ADGRE1Q14246 886 aa16.65■□□□□ 0.26
NEDD4-207ENST00000508075 GPNMBQ14956 572 aa16.65■□□□□ 0.26
NEDD4-207ENST00000508075 DGKDQ16760 1214 aa16.65■□□□□ 0.26
NEDD4-207ENST00000508075 KIAA0753Q2KHM9 967 aa16.65■□□□□ 0.26
NEDD4-207ENST00000508075 CELF3Q5SZQ8 465 aaKnown RBP16.65■□□□□ 0.26
NEDD4-207ENST00000508075 MYSM1Q5VVJ2 828 aa16.65■□□□□ 0.26
NEDD4-207ENST00000508075 CENPQQ7L2Z9 268 aaPredicted RBP16.65■□□□□ 0.26
NEDD4-207ENST00000508075 RASEFQ8IZ41 740 aa16.65■□□□□ 0.26
NEDD4-207ENST00000508075 RETREG2Q8NC44 543 aa16.65■□□□□ 0.26
NEDD4-207ENST00000508075 RRP36Q96EU6 259 aaKnown RBP16.65■□□□□ 0.26
NEDD4-207ENST00000508075 PKD2L1Q9P0L9 805 aa16.65■□□□□ 0.26
NEDD4-207ENST00000508075 MSRAQ9UJ68 235 aa16.65■□□□□ 0.26
NEDD4-207ENST00000508075 LAMC2Q13753 1193 aa16.64■□□□□ 0.25
NEDD4-207ENST00000508075 TRIM50Q86XT4 487 aa16.64■□□□□ 0.25
NEDD4-207ENST00000508075 RPUSD2Q8IZ73 545 aaKnown RBP16.64■□□□□ 0.25
NEDD4-207ENST00000508075 C7orf31Q8N865 590 aa16.64■□□□□ 0.25
NEDD4-207ENST00000508075 PPTC7Q8NI37 304 aa16.64■□□□□ 0.25
NEDD4-207ENST00000508075 SMARCC2Q8TAQ2 1214 aa16.64■□□□□ 0.25
NEDD4-207ENST00000508075 COL25A1Q9BXS0 654 aaPredicted RBP16.64■□□□□ 0.25
NEDD4-207ENST00000508075 GTF2IRD1Q9UHL9 959 aa16.64■□□□□ 0.25
NEDD4-207ENST00000508075 BRPF3Q9ULD4 1205 aa16.64■□□□□ 0.25
NEDD4-207ENST00000508075 HAS3O00219 553 aa16.63■□□□□ 0.25
NEDD4-207ENST00000508075 MEIS2O14770 477 aa16.63■□□□□ 0.25
NEDD4-207ENST00000508075 ATP2A2P16615 1042 aaKnown RBP16.63■□□□□ 0.25
NEDD4-207ENST00000508075 IGFBP4P22692 258 aa16.63■□□□□ 0.25
NEDD4-207ENST00000508075 BMP2KLQ5H9B9 411 aa16.63■□□□□ 0.25
NEDD4-207ENST00000508075 UTP14CQ5TAP6 766 aaKnown RBP16.63■□□□□ 0.25
NEDD4-207ENST00000508075 CYFIP1Q7L576 1253 aa16.63■□□□□ 0.25
NEDD4-207ENST00000508075 PGBD1Q96JS3 809 aa16.63■□□□□ 0.25
NEDD4-207ENST00000508075 TMEM87BQ96K49 555 aa16.63■□□□□ 0.25
NEDD4-207ENST00000508075 SPZ1Q9BXG8 430 aa16.63■□□□□ 0.25
NEDD4-207ENST00000508075 SEZ6LQ9BYH1 1024 aa16.63■□□□□ 0.25
NEDD4-207ENST00000508075 OSBPL7Q9BZF2 842 aa16.63■□□□□ 0.25
NEDD4-207ENST00000508075 MLXIPQ9HAP2 919 aa16.63■□□□□ 0.25
NEDD4-207ENST00000508075 EYSQ5T1H1 3165 aa16.63■□□□□ 0.25
NEDD4-207ENST00000508075 CDH23Q9H251 3354 aa16.63■□□□□ 0.25
NEDD4-207ENST00000508075 F2P00734 622 aa16.62■□□□□ 0.25
NEDD4-207ENST00000508075 KIF5BP33176 963 aa16.62■□□□□ 0.25
NEDD4-207ENST00000508075 PTPN11Q06124 597 aaPredicted RBP16.62■□□□□ 0.25
NEDD4-207ENST00000508075 MICALL1Q8N3F8 863 aa16.62■□□□□ 0.25
NEDD4-207ENST00000508075 EMID1Q96A84 441 aaPredicted RBP16.62■□□□□ 0.25
NEDD4-207ENST00000508075 C16orf70Q9BSU1 422 aa16.62■□□□□ 0.25
NEDD4-207ENST00000508075 MAF1Q9H063 256 aa16.62■□□□□ 0.25
NEDD4-207ENST00000508075 MTIF3Q9H2K0 278 aaKnown RBP16.62■□□□□ 0.25
NEDD4-207ENST00000508075 SLC28A3Q9HAS3 691 aa16.62■□□□□ 0.25
NEDD4-207ENST00000508075 SEC63Q9UGP8 760 aaKnown RBP16.62■□□□□ 0.25
NEDD4-207ENST00000508075 NAP1L2Q9ULW6 460 aaPredicted RBP16.62■□□□□ 0.25
NEDD4-207ENST00000508075 SLC12A7Q9Y666 1083 aa16.62■□□□□ 0.25
NEDD4-207ENST00000508075 TMEM265A0A087WTH1 108 aa16.61■□□□□ 0.25
NEDD4-207ENST00000508075 NBNO60934 754 aa16.61■□□□□ 0.25
NEDD4-207ENST00000508075 PPFIA3O75145 1194 aa16.61■□□□□ 0.25
NEDD4-207ENST00000508075 LGALS2P05162 132 aa16.61■□□□□ 0.25
NEDD4-207ENST00000508075 CA3P07451 260 aa16.61■□□□□ 0.25
NEDD4-207ENST00000508075 CKBP12277 381 aa16.61■□□□□ 0.25
NEDD4-207ENST00000508075 DEFB103AP81534 67 aa16.61■□□□□ 0.25
NEDD4-207ENST00000508075 BFSP2Q13515 415 aa16.61■□□□□ 0.25
NEDD4-207ENST00000508075 RAB30Q15771 203 aa16.61■□□□□ 0.25
NEDD4-207ENST00000508075 ZNF618Q5T7W0 954 aa16.61■□□□□ 0.25
NEDD4-207ENST00000508075 PPP2R2DQ66LE6 453 aa16.61■□□□□ 0.25
NEDD4-207ENST00000508075 KRT40Q6A162 431 aa16.61■□□□□ 0.25
NEDD4-207ENST00000508075 TMTC3Q6ZXV5 915 aa16.61■□□□□ 0.25
NEDD4-207ENST00000508075 LRRC8DQ7L1W4 858 aa16.61■□□□□ 0.25
NEDD4-207ENST00000508075 HEATR3Q7Z4Q2 680 aa16.61■□□□□ 0.25
NEDD4-207ENST00000508075 NEK1Q96PY6 1258 aa16.61■□□□□ 0.25
NEDD4-207ENST00000508075 MAP3K20Q9NYL2 800 aaKnown RBP16.61■□□□□ 0.25
NEDD4-207ENST00000508075 KAT6AQ92794 2004 aa16.6■□□□□ 0.25
NEDD4-207ENST00000508075 EPOPA6NHQ4 379 aa16.6■□□□□ 0.25
NEDD4-207ENST00000508075 PITPNM1O00562 1244 aa16.6■□□□□ 0.25
NEDD4-207ENST00000508075 ATP9AO75110 1047 aa16.6■□□□□ 0.25
NEDD4-207ENST00000508075 SELPP16109 830 aa16.6■□□□□ 0.25
NEDD4-207ENST00000508075 MBTPS1Q14703 1052 aa16.6■□□□□ 0.25
NEDD4-207ENST00000508075 TRIM71Q2Q1W2 868 aaKnown RBP16.6■□□□□ 0.25
NEDD4-207ENST00000508075 TYW1BQ6NUM6 668 aa16.6■□□□□ 0.25
NEDD4-207ENST00000508075 FAM117BQ6P1L5 589 aa16.6■□□□□ 0.25
NEDD4-207ENST00000508075 SESTD1Q86VW0 696 aa16.6■□□□□ 0.25
NEDD4-207ENST00000508075 FANCBQ8NB91 859 aa16.6■□□□□ 0.25
NEDD4-207ENST00000508075 CUL5Q93034 780 aa16.6■□□□□ 0.25
NEDD4-207ENST00000508075 UIMC1Q96RL1 719 aa16.6■□□□□ 0.25
NEDD4-207ENST00000508075 GAS2L1Q99501 681 aaPredicted RBP16.6■□□□□ 0.25
NEDD4-207ENST00000508075 FRMPD4Q14CM0 1322 aa16.6■□□□□ 0.25
NEDD4-207ENST00000508075 CNTNAP5Q8WYK1 1306 aa16.6■□□□□ 0.25
NEDD4-207ENST00000508075 LCHNA4D1U4 455 aa16.59■□□□□ 0.25
NEDD4-207ENST00000508075 SPATA31C2B4DYI2 1134 aa16.59■□□□□ 0.25
NEDD4-207ENST00000508075 NOP56O00567 594 aaKnown RBP16.59■□□□□ 0.25
NEDD4-207ENST00000508075 TREHO43280 583 aa16.59■□□□□ 0.25
NEDD4-207ENST00000508075 CDC45O75419 566 aa16.59■□□□□ 0.25
NEDD4-207ENST00000508075 CTSHP09668 335 aa16.59■□□□□ 0.25
NEDD4-207ENST00000508075 LIFRP42702 1097 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms