RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 CEP131Q9UPN4 1083 aa22.77■■□□□ 1.24
USP53-203ENST00000507597 KIF28PB7ZC32 967 aa22.76■■□□□ 1.23
USP53-203ENST00000507597 DUSP11O75319 330 aaKnown RBP22.76■■□□□ 1.23
USP53-203ENST00000507597 CAPN15O75808 1086 aa22.76■■□□□ 1.23
USP53-203ENST00000507597 ITGB5P18084 799 aa22.76■■□□□ 1.23
USP53-203ENST00000507597 TRIM32Q13049 653 aa22.76■■□□□ 1.23
USP53-203ENST00000507597 TTC38Q5R3I4 469 aa22.76■■□□□ 1.23
USP53-203ENST00000507597 ZNF396Q96N95 335 aaPredicted RBP22.76■■□□□ 1.23
USP53-203ENST00000507597 SDF4Q9BRK5 362 aa22.76■■□□□ 1.23
USP53-203ENST00000507597 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.76■■□□□ 1.23
USP53-203ENST00000507597 TBC1D22BQ9NU19 505 aa22.76■■□□□ 1.23
USP53-203ENST00000507597 FAM86B1E9PN63 330 aa22.75■■□□□ 1.23
USP53-203ENST00000507597 TBX3O15119 743 aa22.75■■□□□ 1.23
USP53-203ENST00000507597 GH1P01241 217 aa22.75■■□□□ 1.23
USP53-203ENST00000507597 FAM86B2P0C5J1 330 aa22.75■■□□□ 1.23
USP53-203ENST00000507597 CCL5P13501 91 aa22.75■■□□□ 1.23
USP53-203ENST00000507597 ATP2B1P20020 1258 aa22.75■■□□□ 1.23
USP53-203ENST00000507597 ADCYAP1R1P41586 468 aa22.75■■□□□ 1.23
USP53-203ENST00000507597 LAMC2Q13753 1193 aa22.75■■□□□ 1.23
USP53-203ENST00000507597 EARS2Q5JPH6 523 aaKnown RBP22.75■■□□□ 1.23
USP53-203ENST00000507597 FERMT3Q86UX7 667 aa22.75■■□□□ 1.23
USP53-203ENST00000507597 DHX37Q8IY37 1157 aaKnown RBP22.75■■□□□ 1.23
USP53-203ENST00000507597 SLFN12Q8IYM2 578 aa22.75■■□□□ 1.23
USP53-203ENST00000507597 FAM20AQ96MK3 541 aa22.75■■□□□ 1.23
USP53-203ENST00000507597 MBOAT7Q96N66 472 aa22.75■■□□□ 1.23
USP53-203ENST00000507597 ZNF577Q9BSK1 485 aa22.75■■□□□ 1.23
USP53-203ENST00000507597 MLXIPQ9HAP2 919 aa22.75■■□□□ 1.23
USP53-203ENST00000507597 KCNH7Q9NS40 1196 aa22.75■■□□□ 1.23
USP53-203ENST00000507597 DDX41Q9UJV9 622 aaKnown RBP22.75■■□□□ 1.23
USP53-203ENST00000507597 LCTP09848 1927 aa22.74■■□□□ 1.23
USP53-203ENST00000507597 ZEB2O60315 1214 aa22.74■■□□□ 1.23
USP53-203ENST00000507597 F13A1P00488 732 aa22.74■■□□□ 1.23
USP53-203ENST00000507597 CCND3P30281 292 aaPredicted RBP22.74■■□□□ 1.23
USP53-203ENST00000507597 RESTQ13127 1097 aa22.74■■□□□ 1.23
USP53-203ENST00000507597 MYSM1Q5VVJ2 828 aa22.74■■□□□ 1.23
USP53-203ENST00000507597 ATL3Q6DD88 541 aa22.74■■□□□ 1.23
USP53-203ENST00000507597 PDGFCQ9NRA1 345 aa22.74■■□□□ 1.23
USP53-203ENST00000507597 LAD1O00515 517 aa22.73■■□□□ 1.23
USP53-203ENST00000507597 NEMFO60524 1076 aa22.73■■□□□ 1.23
USP53-203ENST00000507597 RGS20O76081 388 aa22.73■■□□□ 1.23
USP53-203ENST00000507597 CCDC62Q6P9F0 684 aa22.73■■□□□ 1.23
USP53-203ENST00000507597 TRPV1Q8NER1 839 aa22.73■■□□□ 1.23
USP53-203ENST00000507597 ZFP91Q96JP5 570 aaPredicted RBP22.73■■□□□ 1.23
USP53-203ENST00000507597 DDX49Q9Y6V7 483 aaKnown RBP22.73■■□□□ 1.23
USP53-203ENST00000507597 IGLV3-22A0A075B6J6 115 aa22.72■■□□□ 1.23
USP53-203ENST00000507597 IPO5O00410 1097 aaKnown RBP22.72■■□□□ 1.23
USP53-203ENST00000507597 TDP2O95551 362 aa22.72■■□□□ 1.23
USP53-203ENST00000507597 BRD1O95696 1058 aa22.72■■□□□ 1.23
USP53-203ENST00000507597 MCM7P33993 719 aa22.72■■□□□ 1.23
USP53-203ENST00000507597 CALCRLQ16602 461 aa22.72■■□□□ 1.23
USP53-203ENST00000507597 LY6KQ17RY6 165 aa22.72■■□□□ 1.23
USP53-203ENST00000507597 RNF180Q86T96 592 aa22.72■■□□□ 1.23
USP53-203ENST00000507597 ARRDC4Q8NCT1 418 aa22.72■■□□□ 1.23
USP53-203ENST00000507597 OR6J1Q8NGC5 347 aa22.72■■□□□ 1.23
USP53-203ENST00000507597 RIT2Q99578 217 aa22.72■■□□□ 1.23
USP53-203ENST00000507597 UNC93B1Q9H1C4 597 aa22.72■■□□□ 1.23
USP53-203ENST00000507597 AGO4Q9HCK5 861 aaKnown RBP22.72■■□□□ 1.23
USP53-203ENST00000507597 PAK6Q9NQU5 681 aaPredicted RBP22.72■■□□□ 1.23
USP53-203ENST00000507597 NFASCO94856 1347 aa22.72■■□□□ 1.23
USP53-203ENST00000507597 FAM205CA6NFA0 338 aa22.71■■□□□ 1.23
USP53-203ENST00000507597 DYNC1LI2O43237 492 aaPredicted RBP22.71■■□□□ 1.23
USP53-203ENST00000507597 GGPS1O95749 300 aa22.71■■□□□ 1.23
USP53-203ENST00000507597 GJB1P08034 283 aa22.71■■□□□ 1.23
USP53-203ENST00000507597 ARP10275 920 aa22.71■■□□□ 1.23
USP53-203ENST00000507597 SMPD1P17405 629 aa22.71■■□□□ 1.23
USP53-203ENST00000507597 CPT1AP50416 773 aa22.71■■□□□ 1.23
USP53-203ENST00000507597 ZNF174Q15697 407 aa22.71■■□□□ 1.23
USP53-203ENST00000507597 CELF3Q5SZQ8 465 aaKnown RBP22.71■■□□□ 1.23
USP53-203ENST00000507597 METTL7BQ6UX53 244 aa22.71■■□□□ 1.23
USP53-203ENST00000507597 TLK2Q86UE8 772 aa22.71■■□□□ 1.23
USP53-203ENST00000507597 CYP2W1Q8TAV3 490 aa22.71■■□□□ 1.23
USP53-203ENST00000507597 XPNPEP3Q9NQH7 507 aa22.71■■□□□ 1.23
USP53-203ENST00000507597 CHMP5Q9NZZ3 219 aa22.71■■□□□ 1.23
USP53-203ENST00000507597 CFAP45Q9UL16 551 aa22.71■■□□□ 1.23
USP53-203ENST00000507597 NOP56O00567 594 aaKnown RBP22.7■■□□□ 1.22
USP53-203ENST00000507597 UBA1P22314 1058 aaKnown RBP22.7■■□□□ 1.22
USP53-203ENST00000507597 MTFR1Q15390 333 aa22.7■■□□□ 1.22
USP53-203ENST00000507597 EMID1Q96A84 441 aaPredicted RBP22.7■■□□□ 1.22
USP53-203ENST00000507597 TEKT3Q9BXF9 490 aa22.7■■□□□ 1.22
USP53-203ENST00000507597 GNEQ9Y223 722 aaKnown RBP22.7■■□□□ 1.22
USP53-203ENST00000507597 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.69■■□□□ 1.22
USP53-203ENST00000507597 MSH4O15457 936 aa22.69■■□□□ 1.22
USP53-203ENST00000507597 KPNA6O60684 536 aa22.69■■□□□ 1.22
USP53-203ENST00000507597 GAS7O60861 476 aa22.69■■□□□ 1.22
USP53-203ENST00000507597 MYCP01106 439 aaPredicted RBP22.69■■□□□ 1.22
USP53-203ENST00000507597 KCNA2P16389 499 aa22.69■■□□□ 1.22
USP53-203ENST00000507597 GJA9P57773 515 aa22.69■■□□□ 1.22
USP53-203ENST00000507597 KRT76Q01546 638 aa22.69■■□□□ 1.22
USP53-203ENST00000507597 TMEM266Q2M3C6 531 aa22.69■■□□□ 1.22
USP53-203ENST00000507597 LRCH2Q5VUJ6 765 aa22.69■■□□□ 1.22
USP53-203ENST00000507597 FOXD4L5Q5VV16 416 aaPredicted RBP22.69■■□□□ 1.22
USP53-203ENST00000507597 PCSK9Q8NBP7 692 aaKnown RBP22.69■■□□□ 1.22
USP53-203ENST00000507597 FOXD4L4Q8WXT5 416 aaPredicted RBP22.69■■□□□ 1.22
USP53-203ENST00000507597 DEFB118Q96PH6 123 aa22.69■■□□□ 1.22
USP53-203ENST00000507597 RAB34Q9BZG1 259 aa22.69■■□□□ 1.22
USP53-203ENST00000507597 SLC9A2Q9UBY0 812 aa22.69■■□□□ 1.22
USP53-203ENST00000507597 MYH7BA7E2Y1 1941 aa22.69■■□□□ 1.22
USP53-203ENST00000507597 EDIL3O43854 480 aa22.68■■□□□ 1.22
USP53-203ENST00000507597 ARIH2O95376 493 aa22.68■■□□□ 1.22
USP53-203ENST00000507597 SGPL1O95470 568 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms