RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 MAPK8IP3Q9UPT6 1336 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 COL4A6Q14031 1691 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 ABLIM1O14639 778 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 FOXO3O43524 673 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 MTA2O94776 668 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 SRGAP2CP0DJJ0 459 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 MSNP26038 577 aaKnown RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 GRIA2P42262 883 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 AARSP49588 968 aaKnown RBP eCLIP2.56□□□□□ -25e-7■■■■■ 27.5
NEDD4-205ENST00000506154 SNX1Q13596 522 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 ZNF267Q14586 743 aaPredicted RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 SMUG1Q53HV7 270 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 LMBRD2Q68DH5 695 aaPredicted RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 HDGFL2Q7Z4V5 671 aaPredicted RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 UNC5CLQ8IV45 518 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 NXPE1Q8N323 547 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 HELQQ8TDG4 1101 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 LRRC59Q96AG4 307 aaKnown RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 PPP1R14BQ96C90 147 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 BICD1Q96G01 975 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 ERO1AQ96HE7 468 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 DHTKD1Q96HY7 919 aaPredicted RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 LRCH3Q96II8 777 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 RBM41Q96IZ5 413 aaKnown RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 BTBD6Q96KE9 485 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 C1orf74Q96LT6 269 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 FGD4Q96M96 766 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 FAM167BQ9BTA0 163 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 UPF2Q9HAU5 1272 aaKnown RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 HOMER2Q9NSB8 354 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 STIM2Q9P246 746 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 H3BQF6 201 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 CYP19A1P11511 503 aaPredicted RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 PEPDP12955 493 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 BMP1P13497 986 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 FGFR2P21802 821 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 PSMA3P25788 255 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 NOS2P35228 1153 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 PPM1FP49593 454 aaPredicted RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 GNAQP50148 359 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 TRIP4Q15650 581 aaPredicted RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 SV2CQ496J9 727 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 PARP10Q53GL7 1025 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 AP1ARQ63HQ0 302 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 C6orf89Q6UWU4 347 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 RSRC2Q7L4I2 434 aaKnown RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 NSUN7Q8NE18 718 aaKnown RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 ARMC2Q8NEN0 867 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 SMARCC1Q92922 1105 aaPredicted RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 SPON2Q9BUD6 331 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 BCO2Q9BYV7 579 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 INCENPQ9NQS7 918 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 ZBTB21Q9ULJ3 1066 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 CARMIL3Q8ND23 1372 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 ZBTB24O43167 697 aaPredicted RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 CCP110O43303 1012 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 DNAJC6O75061 913 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 BCRP11274 1271 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 PIM1P11309 404 aaPredicted RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 GSTM4Q03013 218 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 RRP12Q5JTH9 1297 aaKnown RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 PLA2G2CQ5R387 149 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 CCDC181Q5TID7 509 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 MYO1HQ8N1T3 1032 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 EHBP1Q8NDI1 1231 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 DDX17Q92841 729 aaKnown RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 ZFRQ96KR1 1074 aaKnown RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 TMX1Q9H3N1 280 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 INIPQ9NRY2 104 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 DDX56Q9NY93 547 aaKnown RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 RGL1Q9NZL6 768 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 H2AFY2Q9P0M6 372 aaPredicted RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 CLIP2Q9UDT6 1046 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 RAB21Q9UL25 225 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 PTPRFP10586 1907 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 PCDH11XQ9BZA7 1347 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 PCDH11YQ9BZA8 1340 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 MED23Q9ULK4 1368 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 ERICH2A1L162 156 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 ENO4A6NNW6 628 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 KIF28PB7ZC32 967 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 ATP1A2P50993 1020 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 NFKB2Q00653 900 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 ROR2Q01974 943 aaKnown RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 IFRD2Q12894 506 aaPredicted RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 COG2Q14746 738 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 BRDTQ58F21 947 aaPredicted RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 NUGGCQ68CJ6 796 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 RIPOR1Q6ZS17 1223 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 ADAT2Q7Z6V5 191 aaKnown RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 PPFIBP1Q86W92 1011 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 BPHLQ86WA6 291 aaPredicted RBP2.55□□□□□ -2
NEDD4-205ENST00000506154 C1orf127Q8N9H9 656 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 OSBP2Q969R2 916 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 RMDN2Q96LZ7 410 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 NEUROD6Q96NK8 337 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 PCDH18Q9HCL0 1135 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 BATF3Q9NR55 127 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 CDC23Q9UJX2 597 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 LZTS1Q9Y250 596 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms