RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 LINC01553A4QN01 128 aa9.6□□□□□ -0.87
SNF8-204ENST00000506104 NOP56O00567 594 aaKnown RBP9.6□□□□□ -0.87
SNF8-204ENST00000506104 LPXNO60711 386 aa9.6□□□□□ -0.87
SNF8-204ENST00000506104 EIF3JO75822 258 aaKnown RBP9.6□□□□□ -0.87
SNF8-204ENST00000506104 GGPS1O95749 300 aa9.6□□□□□ -0.87
SNF8-204ENST00000506104 FGRP09769 529 aa9.6□□□□□ -0.87
SNF8-204ENST00000506104 SDSP20132 328 aa9.6□□□□□ -0.87
SNF8-204ENST00000506104 POU3F3P20264 500 aaPredicted RBP9.6□□□□□ -0.87
SNF8-204ENST00000506104 IBSPP21815 317 aaPredicted RBP9.6□□□□□ -0.87
SNF8-204ENST00000506104 NOVP48745 357 aa9.6□□□□□ -0.87
SNF8-204ENST00000506104 SP4Q02446 784 aa9.6□□□□□ -0.87
SNF8-204ENST00000506104 PTK7Q13308 1070 aa9.6□□□□□ -0.87
SNF8-204ENST00000506104 IMMTQ16891 758 aaKnown RBP9.6□□□□□ -0.87
SNF8-204ENST00000506104 ASPRV1Q53RT3 343 aa9.6□□□□□ -0.87
SNF8-204ENST00000506104 DGKHQ86XP1 1220 aa9.6□□□□□ -0.87
SNF8-204ENST00000506104 KHSRPQ92945 711 aaKnown RBP eCLIP9.6□□□□□ -0.878e-7■□□□□ 9
SNF8-204ENST00000506104 ATP6V0A1Q93050 837 aa9.6□□□□□ -0.87
SNF8-204ENST00000506104 IWS1Q96ST2 819 aa9.6□□□□□ -0.87
SNF8-204ENST00000506104 C17orf80Q9BSJ5 609 aa9.6□□□□□ -0.87
SNF8-204ENST00000506104 UBE2ZQ9H832 354 aaPredicted RBP9.6□□□□□ -0.87
SNF8-204ENST00000506104 SUGCTQ9HAC7 445 aa9.6□□□□□ -0.87
SNF8-204ENST00000506104 PXMP2Q9NR77 195 aa9.6□□□□□ -0.87
SNF8-204ENST00000506104 DDX41Q9UJV9 622 aaKnown RBP9.6□□□□□ -0.87
SNF8-204ENST00000506104 BRWD1Q9NSI6 2320 aa9.59□□□□□ -0.87
SNF8-204ENST00000506104 C17orf102A2RUQ5 167 aa9.59□□□□□ -0.87
SNF8-204ENST00000506104 RSPH10B2B2RC85 870 aa9.59□□□□□ -0.87
SNF8-204ENST00000506104 H3BQ06 376 aaPredicted RBP9.59□□□□□ -0.87
SNF8-204ENST00000506104 EFCAB14O75071 495 aa9.59□□□□□ -0.87
SNF8-204ENST00000506104 LGR5O75473 907 aa9.59□□□□□ -0.87
SNF8-204ENST00000506104 GJB5O95377 273 aa9.59□□□□□ -0.87
SNF8-204ENST00000506104 PARNO95453 639 aaKnown RBP9.59□□□□□ -0.87
SNF8-204ENST00000506104 RSPH10BP0C881 870 aa9.59□□□□□ -0.87
SNF8-204ENST00000506104 SNHG28P0DPA3 235 aa9.59□□□□□ -0.87
SNF8-204ENST00000506104 PCP11498 1178 aaKnown RBP9.59□□□□□ -0.87
SNF8-204ENST00000506104 IL9P15248 144 aa9.59□□□□□ -0.87
SNF8-204ENST00000506104 RRP1P56182 461 aaKnown RBP9.59□□□□□ -0.87
SNF8-204ENST00000506104 IFIT1BQ5T764 474 aaKnown RBP9.59□□□□□ -0.87
SNF8-204ENST00000506104 UTP14CQ5TAP6 766 aaKnown RBP9.59□□□□□ -0.87
SNF8-204ENST00000506104 PTCRAQ6ISU1 281 aaPredicted RBP9.59□□□□□ -0.87
SNF8-204ENST00000506104 RGS22Q8NE09 1264 aa9.59□□□□□ -0.87
SNF8-204ENST00000506104 DBF4BQ8NFT6 615 aa9.59□□□□□ -0.87
SNF8-204ENST00000506104 WNT8BQ93098 351 aa9.59□□□□□ -0.87
SNF8-204ENST00000506104 YME1L1Q96TA2 773 aa9.59□□□□□ -0.87
SNF8-204ENST00000506104 AMNQ9BXJ7 453 aa9.59□□□□□ -0.87
SNF8-204ENST00000506104 JMJD4Q9H9V9 463 aa9.59□□□□□ -0.87
SNF8-204ENST00000506104 INSL6Q9Y581 213 aa9.59□□□□□ -0.87
SNF8-204ENST00000506104 PCDHA1Q9Y5I3 950 aa9.59□□□□□ -0.87
SNF8-204ENST00000506104 SALL3Q9BXA9 1300 aa9.58□□□□□ -0.88
SNF8-204ENST00000506104 KLRF2D3W0D1 207 aa9.58□□□□□ -0.88
SNF8-204ENST00000506104 CCND2P30279 289 aa9.58□□□□□ -0.88
SNF8-204ENST00000506104 ERVK-21P61565 698 aa9.58□□□□□ -0.88
SNF8-204ENST00000506104 GPM6BQ13491 265 aa9.58□□□□□ -0.88
SNF8-204ENST00000506104 GPNMBQ14956 572 aa9.58□□□□□ -0.88
SNF8-204ENST00000506104 CLUL1Q15846 466 aa9.58□□□□□ -0.88
SNF8-204ENST00000506104 PTPROQ16827 1216 aa9.58□□□□□ -0.88
SNF8-204ENST00000506104 SESTD1Q86VW0 696 aa9.58□□□□□ -0.88
SNF8-204ENST00000506104 GJD3Q8N144 294 aa9.58□□□□□ -0.88
SNF8-204ENST00000506104 STAG2Q8N3U4 1231 aa9.58□□□□□ -0.88
SNF8-204ENST00000506104 ENAHQ8N8S7 591 aaPredicted RBP9.58□□□□□ -0.88
SNF8-204ENST00000506104 PPTC7Q8NI37 304 aa9.58□□□□□ -0.88
SNF8-204ENST00000506104 SEPT8Q92599 483 aa9.58□□□□□ -0.88
SNF8-204ENST00000506104 GPKOWQ92917 476 aaPredicted RBP eCLIP9.58□□□□□ -0.88
SNF8-204ENST00000506104 CTAGE1Q96RT6 745 aa9.58□□□□□ -0.88
SNF8-204ENST00000506104 KRT23Q9C075 422 aa9.58□□□□□ -0.88
SNF8-204ENST00000506104 CD320Q9NPF0 282 aa9.58□□□□□ -0.88
SNF8-204ENST00000506104 RTEL1Q9NZ71 1219 aa9.58□□□□□ -0.88
SNF8-204ENST00000506104 ZSWIM5Q9P217 1185 aa9.58□□□□□ -0.88
SNF8-204ENST00000506104 ZMYM6O95789 1325 aa9.57□□□□□ -0.88
SNF8-204ENST00000506104 EMSYQ7Z589 1322 aa9.57□□□□□ -0.88
SNF8-204ENST00000506104 CDH23Q9H251 3354 aa9.57□□□□□ -0.88
SNF8-204ENST00000506104 CHD9Q3L8U1 2897 aa9.57□□□□□ -0.88
SNF8-204ENST00000506104 GCOM1H8Y6P7 765 aaPredicted RBP9.57□□□□□ -0.88
SNF8-204ENST00000506104 CXCL10P02778 98 aa9.57□□□□□ -0.88
SNF8-204ENST00000506104 POLR2MP0CAP2 368 aa9.57□□□□□ -0.88
SNF8-204ENST00000506104 SMIM10L2AP0DMW4 78 aa9.57□□□□□ -0.88
SNF8-204ENST00000506104 SMIM10L2BP0DMW5 78 aa9.57□□□□□ -0.88
SNF8-204ENST00000506104 PGM5Q15124 567 aa9.57□□□□□ -0.88
SNF8-204ENST00000506104 HSDL1Q3SXM5 330 aa9.57□□□□□ -0.88
SNF8-204ENST00000506104 CELF3Q5SZQ8 465 aaKnown RBP9.57□□□□□ -0.88
SNF8-204ENST00000506104 KCNV1Q6PIU1 500 aa9.57□□□□□ -0.88
SNF8-204ENST00000506104 IL31RAQ8NI17 732 aa9.57□□□□□ -0.88
SNF8-204ENST00000506104 PDCD2LQ9BRP1 358 aa9.57□□□□□ -0.88
SNF8-204ENST00000506104 IFIH1Q9BYX4 1025 aaKnown RBP9.57□□□□□ -0.88
SNF8-204ENST00000506104 RWDD1Q9H446 243 aaPredicted RBP9.57□□□□□ -0.88
SNF8-204ENST00000506104 IGFLR1Q9H665 355 aa9.57□□□□□ -0.88
SNF8-204ENST00000506104 CLDND1Q9NY35 253 aa9.57□□□□□ -0.88
SNF8-204ENST00000506104 LMCD1Q9NZU5 365 aa9.57□□□□□ -0.88
SNF8-204ENST00000506104 CTNNA3Q9UI47 895 aa9.57□□□□□ -0.88
SNF8-204ENST00000506104 ERICH2A1L162 156 aa9.56□□□□□ -0.88
SNF8-204ENST00000506104 H3BRB1 525 aa9.56□□□□□ -0.88
SNF8-204ENST00000506104 TREHO43280 583 aa9.56□□□□□ -0.88
SNF8-204ENST00000506104 F2P00734 622 aa9.56□□□□□ -0.88
SNF8-204ENST00000506104 LGALS2P05162 132 aa9.56□□□□□ -0.88
SNF8-204ENST00000506104 UBA1P22314 1058 aaKnown RBP9.56□□□□□ -0.88
SNF8-204ENST00000506104 CTNNB1P35222 781 aa9.56□□□□□ -0.88
SNF8-204ENST00000506104 ARHGAP4P98171 946 aa9.56□□□□□ -0.88
SNF8-204ENST00000506104 TRDNQ13061 729 aa9.56□□□□□ -0.88
SNF8-204ENST00000506104 HIC1Q14526 733 aa9.56□□□□□ -0.88
SNF8-204ENST00000506104 MBTPS1Q14703 1052 aa9.56□□□□□ -0.88
SNF8-204ENST00000506104 LEXMQ3ZCV2 418 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms