RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 CUL5Q93034 780 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 CRACR2AQ9BSW2 395 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 MED4Q9NPJ6 270 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 SERPINB13Q9UIV8 391 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 SALL4Q9UJQ4 1053 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 USP21Q9UK80 565 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 HPCAL4Q9UM19 191 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 GAKO14976 1311 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 BTAF1O14981 1849 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 NPHP3-ACAD11A0A0J9YXS1 232 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 USP17L15C9J2P7 530 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 USP17L13C9JLJ4 530 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 USP17L11C9JVI0 530 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 USP17L18D6R9N7 530 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 USP17L22D6RA61 530 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 USP17L17D6RBQ6 530 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 USP17L19D6RCP7 530 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 USP17L20D6RJB6 530 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 E9PMD0 336 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 NCK2O43639 380 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 BUB1O43683 1085 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 SYF2O95926 243 aaKnown RBP8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 MRPL12P52815 198 aaKnown RBP8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 SLC7A5Q01650 507 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 APBA1Q02410 837 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 ARID5AQ03989 594 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 ZNF543Q08ER8 600 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 USP17L24Q0WX57 530 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 COASYQ13057 564 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 PSMD2Q13200 908 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 ENOX2Q16206 610 aaKnown RBP8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 CCDC181Q5TID7 509 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 PPP4R3AQ6IN85 833 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 CCDC70Q6NSX1 233 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 USP17L6PQ6QN14 398 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 GOLGA6L1Q8N7Z2 621 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 IQCDQ96DY2 449 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 ALS2CR12Q96Q35 445 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 LRRC1Q9BTT6 524 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 FGFBP2Q9BYJ0 223 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 LRRC27Q9C0I9 530 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 ZHX3Q9H4I2 956 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 BMP2KQ9NSY1 1161 aaPredicted RBP8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 USP40Q9NVE5 1235 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 EHD2Q9NZN4 543 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 KIAA1024Q9UPX6 916 aa8.44□□□□□ -1.06
PPARGC1A-204ENST00000506055 SNHG28P0DPA3 235 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 GYS1P13807 737 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 GGCXP38435 758 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 DNA2P51530 1060 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 IRX5P78411 483 aaPredicted RBP8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 FKBP3Q00688 224 aaKnown RBP8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 GABPAQ06546 454 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 KCNMA1Q12791 1236 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 SKIDA1Q1XH10 827 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 TMEM119Q4V9L6 283 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 CERKQ8TCT0 537 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 BAP1Q92560 729 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 DNAJC19Q96DA6 116 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 OSBPL9Q96SU4 736 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 SELENOOQ9BVL4 669 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 TRIM34Q9BYJ4 488 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 VIPAS39Q9H9C1 493 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 COL4A3BPQ9Y5P4 624 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 CDK5RAP2Q96SN8 1893 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 ZBTB5O15062 677 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 SLC1A4P43007 532 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 EHHADHQ08426 723 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 DOK7Q18PE1 504 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 HERC4Q5GLZ8 1057 aaPredicted RBP8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 MUM1L1Q5H9M0 696 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 FAM26FQ5R3K3 315 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 TMC4Q7Z404 712 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 FNBP4Q8N3X1 1017 aaPredicted RBP8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 SPATA4Q8NEY3 305 aa8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 CWC15Q9P013 229 aaKnown RBP8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 DMGDHQ9UI17 866 aaKnown RBP8.43□□□□□ -1.06
PPARGC1A-204ENST00000506055 LCA5LO95447 670 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 CLK2P49760 499 aaKnown RBP8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 POLR2FP61218 127 aaKnown RBP8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 FAM83BQ5T0W9 1011 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 PDXDC1Q6P996 788 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 CERS5Q8N5B7 392 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 MTMR8Q96EF0 704 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 PODXL2Q9NZ53 605 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 ABCB11O95342 1321 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 IGKV6D-41A0A0C4DH26 115 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 POTEB3A0JP26 581 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 POTECB2RU33 542 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 TOM1O60784 492 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 NOL4O94818 638 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 KRT18P05783 430 aaKnown RBP8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 PLA2G4BP0C869 781 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 SHMT1P34896 483 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 STAT3P40763 770 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 AARSP49588 968 aaKnown RBP eCLIP8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 SLC9C1Q4G0N8 1177 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 SFMBT2Q5VUG0 894 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms