RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 GOLGA8HP0CJ92 632 aa18.13■□□□□ 0.49
PDCD6-203ENST00000505526 CDC27P30260 824 aa18.13■□□□□ 0.49
PDCD6-203ENST00000505526 CPT1AP50416 773 aa18.13■□□□□ 0.49
PDCD6-203ENST00000505526 ST3GAL1Q11201 340 aa18.13■□□□□ 0.49
PDCD6-203ENST00000505526 BAATQ14032 418 aaPredicted RBP18.13■□□□□ 0.49
PDCD6-203ENST00000505526 CCDC96Q2M329 555 aa18.13■□□□□ 0.49
PDCD6-203ENST00000505526 SLC9A7Q96T83 725 aa18.13■□□□□ 0.49
PDCD6-203ENST00000505526 FAM217BQ9NTX9 383 aaPredicted RBP18.13■□□□□ 0.49
PDCD6-203ENST00000505526 ADD3Q9UEY8 706 aaKnown RBP18.13■□□□□ 0.49
PDCD6-203ENST00000505526 MAD2L2Q9UI95 211 aa18.13■□□□□ 0.49
PDCD6-203ENST00000505526 LCTP09848 1927 aa18.13■□□□□ 0.49
PDCD6-203ENST00000505526 FRMPD2Q68DX3 1309 aaPredicted RBP18.12■□□□□ 0.49
PDCD6-203ENST00000505526 EPOPA6NHQ4 379 aa18.12■□□□□ 0.49
PDCD6-203ENST00000505526 KIF5BP33176 963 aa18.12■□□□□ 0.49
PDCD6-203ENST00000505526 RFC2P35250 354 aa18.12■□□□□ 0.49
PDCD6-203ENST00000505526 ADD1P35611 737 aaKnown RBP18.12■□□□□ 0.49
PDCD6-203ENST00000505526 ALDH5A1P51649 535 aaPredicted RBP18.12■□□□□ 0.49
PDCD6-203ENST00000505526 ZNF543Q08ER8 600 aa18.12■□□□□ 0.49
PDCD6-203ENST00000505526 FAM47CQ5HY64 1035 aa18.12■□□□□ 0.49
PDCD6-203ENST00000505526 STAG2Q8N3U4 1231 aa18.12■□□□□ 0.49
PDCD6-203ENST00000505526 OR6J1Q8NGC5 347 aa18.12■□□□□ 0.49
PDCD6-203ENST00000505526 PHOSPHO2Q8TCD6 241 aa18.12■□□□□ 0.49
PDCD6-203ENST00000505526 ARNTL2Q8WYA1 636 aa18.12■□□□□ 0.49
PDCD6-203ENST00000505526 MTG1Q9BT17 334 aaPredicted RBP18.12■□□□□ 0.49
PDCD6-203ENST00000505526 RBM28Q9NW13 759 aaKnown RBP18.12■□□□□ 0.49
PDCD6-203ENST00000505526 COG5Q9UP83 839 aa18.12■□□□□ 0.49
PDCD6-203ENST00000505526 CCDC196A0A1B0GTZ2 297 aa18.11■□□□□ 0.49
PDCD6-203ENST00000505526 RBM47A0AV96 593 aaKnown RBP18.11■□□□□ 0.49
PDCD6-203ENST00000505526 PALM3A6NDB9 673 aaPredicted RBP18.11■□□□□ 0.49
PDCD6-203ENST00000505526 PPP2R5BQ15173 497 aa18.11■□□□□ 0.49
PDCD6-203ENST00000505526 NBPF20Q3BBV1 942 aa18.11■□□□□ 0.49
PDCD6-203ENST00000505526 ASPRV1Q53RT3 343 aa18.11■□□□□ 0.49
PDCD6-203ENST00000505526 KRT40Q6A162 431 aa18.11■□□□□ 0.49
PDCD6-203ENST00000505526 RETREG2Q8NC44 543 aa18.11■□□□□ 0.49
PDCD6-203ENST00000505526 GPCPD1Q9NPB8 672 aa18.11■□□□□ 0.49
PDCD6-203ENST00000505526 SCN5AQ14524 2016 aa18.11■□□□□ 0.49
PDCD6-203ENST00000505526 PRRC2BQ5JSZ5 2229 aaKnown RBP18.1■□□□□ 0.49
PDCD6-203ENST00000505526 LOC102724159A0A0B4J2E5 919 aa18.1■□□□□ 0.49
PDCD6-203ENST00000505526 CPLX1O14810 134 aa18.1■□□□□ 0.49
PDCD6-203ENST00000505526 DHX16O60231 1041 aaKnown RBP18.1■□□□□ 0.49
PDCD6-203ENST00000505526 PLEKHA8P1O95397 391 aa18.1■□□□□ 0.49
PDCD6-203ENST00000505526 IQCF3P0C7M6 154 aa18.1■□□□□ 0.49
PDCD6-203ENST00000505526 TAP1Q03518 808 aa18.1■□□□□ 0.49
PDCD6-203ENST00000505526 PWP2Q15269 919 aaKnown RBP18.1■□□□□ 0.49
PDCD6-203ENST00000505526 GPATCH4Q5T3I0 446 aaKnown RBP18.1■□□□□ 0.49
PDCD6-203ENST00000505526 HERC6Q8IVU3 1022 aa18.1■□□□□ 0.49
PDCD6-203ENST00000505526 CMTR1Q8N1G2 835 aaKnown RBP18.1■□□□□ 0.49
PDCD6-203ENST00000505526 PPP1R13LQ8WUF5 828 aa18.1■□□□□ 0.49
PDCD6-203ENST00000505526 FTOQ9C0B1 505 aaKnown RBP eCLIP18.1■□□□□ 0.49
PDCD6-203ENST00000505526 RANBP17Q9H2T7 1088 aaKnown RBP18.1■□□□□ 0.49
PDCD6-203ENST00000505526 EPHX3Q9H6B9 360 aa18.1■□□□□ 0.49
PDCD6-203ENST00000505526 PTPDC1A2A3K4 754 aa18.09■□□□□ 0.49
PDCD6-203ENST00000505526 KIF28PB7ZC32 967 aa18.09■□□□□ 0.49
PDCD6-203ENST00000505526 KLRF2D3W0D1 207 aa18.09■□□□□ 0.49
PDCD6-203ENST00000505526 PITPNM1O00562 1244 aa18.09■□□□□ 0.49
PDCD6-203ENST00000505526 NFIBO00712 420 aa18.09■□□□□ 0.49
PDCD6-203ENST00000505526 TLL1O43897 1013 aa18.09■□□□□ 0.49
PDCD6-203ENST00000505526 ARHGEF15O94989 841 aa18.09■□□□□ 0.49
PDCD6-203ENST00000505526 SLC16A2P36021 539 aa18.09■□□□□ 0.49
PDCD6-203ENST00000505526 CUL4AQ13619 759 aa18.09■□□□□ 0.49
PDCD6-203ENST00000505526 BRDTQ58F21 947 aaPredicted RBP18.09■□□□□ 0.49
PDCD6-203ENST00000505526 TTBK2Q6IQ55 1244 aa18.09■□□□□ 0.49
PDCD6-203ENST00000505526 NFRKBQ6P4R8 1299 aa18.09■□□□□ 0.49
PDCD6-203ENST00000505526 TMTC3Q6ZXV5 915 aa18.09■□□□□ 0.49
PDCD6-203ENST00000505526 CCDC82Q8N4S0 544 aa18.09■□□□□ 0.49
PDCD6-203ENST00000505526 DTNBO60941 627 aa18.08■□□□□ 0.49
PDCD6-203ENST00000505526 PPFIA3O75145 1194 aa18.08■□□□□ 0.49
PDCD6-203ENST00000505526 GNAQP50148 359 aa18.08■□□□□ 0.49
PDCD6-203ENST00000505526 CPLX2Q6PUV4 134 aaKnown RBP18.08■□□□□ 0.49
PDCD6-203ENST00000505526 SRBD1Q8N5C6 995 aaKnown RBP18.08■□□□□ 0.49
PDCD6-203ENST00000505526 HLA-CQ95604 372 aa18.08■□□□□ 0.49
PDCD6-203ENST00000505526 LRFN3Q9BTN0 628 aa18.08■□□□□ 0.49
PDCD6-203ENST00000505526 UBA5Q9GZZ9 404 aa18.08■□□□□ 0.49
PDCD6-203ENST00000505526 CPVLQ9H3G5 476 aa18.08■□□□□ 0.49
PDCD6-203ENST00000505526 NKRFO15226 690 aaKnown RBP eCLIP18.07■□□□□ 0.48
PDCD6-203ENST00000505526 KPNA6O60684 536 aa18.07■□□□□ 0.48
PDCD6-203ENST00000505526 CTDNEP1O95476 244 aa18.07■□□□□ 0.48
PDCD6-203ENST00000505526 CALML3P27482 149 aa18.07■□□□□ 0.48
PDCD6-203ENST00000505526 HOXD11P31277 338 aaPredicted RBP18.07■□□□□ 0.48
PDCD6-203ENST00000505526 PTPN11Q06124 597 aaPredicted RBP18.07■□□□□ 0.48
PDCD6-203ENST00000505526 GRB10Q13322 594 aa18.07■□□□□ 0.48
PDCD6-203ENST00000505526 BFSP2Q13515 415 aa18.07■□□□□ 0.48
PDCD6-203ENST00000505526 NTRK3Q16288 839 aa18.07■□□□□ 0.48
PDCD6-203ENST00000505526 BTNL9Q6UXG8 535 aa18.07■□□□□ 0.48
PDCD6-203ENST00000505526 SLC30A10Q6XR72 485 aa18.07■□□□□ 0.48
PDCD6-203ENST00000505526 LZTS2Q9BRK4 669 aa18.07■□□□□ 0.48
PDCD6-203ENST00000505526 A6NJR5 290 aa18.07■□□□□ 0.48
PDCD6-203ENST00000505526 CDKL5O76039 1030 aa18.07■□□□□ 0.48
PDCD6-203ENST00000505526 HSP90AA1P07900 732 aaKnown RBP18.07■□□□□ 0.48
PDCD6-203ENST00000505526 PDE4DQ08499 809 aa18.07■□□□□ 0.48
PDCD6-203ENST00000505526 SYDE2Q5VT97 1194 aa18.07■□□□□ 0.48
PDCD6-203ENST00000505526 SPRYD3Q8NCJ5 442 aa18.07■□□□□ 0.48
PDCD6-203ENST00000505526 NSUN7Q8NE18 718 aaKnown RBP18.07■□□□□ 0.48
PDCD6-203ENST00000505526 PHKBQ93100 1093 aa18.07■□□□□ 0.48
PDCD6-203ENST00000505526 FOXD4L1Q9NU39 408 aa18.07■□□□□ 0.48
PDCD6-203ENST00000505526 NOD1Q9Y239 953 aa18.07■□□□□ 0.48
PDCD6-203ENST00000505526 HCN4Q9Y3Q4 1203 aa18.07■□□□□ 0.48
PDCD6-203ENST00000505526 ARIH1Q9Y4X5 557 aaPredicted RBP18.07■□□□□ 0.48
PDCD6-203ENST00000505526 SCN10AQ9Y5Y9 1956 aa18.06■□□□□ 0.48
PDCD6-203ENST00000505526 JAK2O60674 1132 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms