RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 PRR31Q5SQ13 230 aa7.53□□□□□ -1.2
DEPDC1B-203ENST00000505017 DIO2Q92813 273 aa7.53□□□□□ -1.2
DEPDC1B-203ENST00000505017 NTMQ9P121 344 aa7.53□□□□□ -1.2
DEPDC1B-203ENST00000505017 WASF3Q9UPY6 502 aa7.53□□□□□ -1.2
DEPDC1B-203ENST00000505017 ERCC6Q03468 1493 aa7.53□□□□□ -1.2
DEPDC1B-203ENST00000505017 DDAH1O94760 285 aa7.52□□□□□ -1.21
DEPDC1B-203ENST00000505017 SSBP05455 408 aaKnown RBP eCLIP7.52□□□□□ -1.21
DEPDC1B-203ENST00000505017 STAT5AP42229 794 aa7.52□□□□□ -1.21
DEPDC1B-203ENST00000505017 ITGA1P56199 1179 aa7.52□□□□□ -1.21
DEPDC1B-203ENST00000505017 PLP2Q04941 152 aa7.52□□□□□ -1.21
DEPDC1B-203ENST00000505017 TNNI3KQ59H18 835 aa7.52□□□□□ -1.21
DEPDC1B-203ENST00000505017 SLC35F1Q5T1Q4 408 aa7.52□□□□□ -1.21
DEPDC1B-203ENST00000505017 ACBD5Q5T8D3 534 aaPredicted RBP7.52□□□□□ -1.21
DEPDC1B-203ENST00000505017 IQCEQ6IPM2 695 aa7.52□□□□□ -1.21
DEPDC1B-203ENST00000505017 CD300LDQ6UXZ3 194 aa7.52□□□□□ -1.21
DEPDC1B-203ENST00000505017 MILR1Q7Z6M3 343 aa7.52□□□□□ -1.21
DEPDC1B-203ENST00000505017 CELF2-AS1Q8N7Q2 184 aa7.52□□□□□ -1.21
DEPDC1B-203ENST00000505017 ADAMTS17Q8TE56 1095 aa7.52□□□□□ -1.21
DEPDC1B-203ENST00000505017 SEC14L1Q92503 715 aa7.52□□□□□ -1.21
DEPDC1B-203ENST00000505017 RBM15Q96T37 977 aaKnown RBP eCLIP7.52□□□□□ -1.21
DEPDC1B-203ENST00000505017 TARBP1Q13395 1621 aaKnown RBP7.52□□□□□ -1.21
DEPDC1B-203ENST00000505017 CUL7Q14999 1698 aa7.51□□□□□ -1.21
DEPDC1B-203ENST00000505017 THOC2Q8NI27 1593 aaKnown RBP7.51□□□□□ -1.21
DEPDC1B-203ENST00000505017 TCF3P15923 654 aa7.51□□□□□ -1.21
DEPDC1B-203ENST00000505017 CNR2P34972 360 aa7.51□□□□□ -1.21
DEPDC1B-203ENST00000505017 SLC10A6Q3KNW5 377 aa7.51□□□□□ -1.21
DEPDC1B-203ENST00000505017 UBXN11Q5T124 520 aa7.51□□□□□ -1.21
DEPDC1B-203ENST00000505017 MROH9Q5TGP6 573 aa7.51□□□□□ -1.21
DEPDC1B-203ENST00000505017 FAM126BQ8IXS8 530 aa7.51□□□□□ -1.21
DEPDC1B-203ENST00000505017 PPIL6Q8IXY8 311 aa7.51□□□□□ -1.21
DEPDC1B-203ENST00000505017 AP5M1Q9H0R1 490 aa7.51□□□□□ -1.21
DEPDC1B-203ENST00000505017 USP40Q9NVE5 1235 aa7.51□□□□□ -1.21
DEPDC1B-203ENST00000505017 NPFFR2Q9Y5X5 522 aa7.51□□□□□ -1.21
DEPDC1B-203ENST00000505017 ABCA5Q8WWZ7 1642 aa7.51□□□□□ -1.21
DEPDC1B-203ENST00000505017 IFT140Q96RY7 1462 aa7.5□□□□□ -1.21
DEPDC1B-203ENST00000505017 RAD54L2Q9Y4B4 1467 aa7.5□□□□□ -1.21
DEPDC1B-203ENST00000505017 MEFVO15553 781 aaPredicted RBP7.5□□□□□ -1.21
DEPDC1B-203ENST00000505017 RPL13P26373 211 aaKnown RBP7.5□□□□□ -1.21
DEPDC1B-203ENST00000505017 ADAM9Q13443 819 aa7.5□□□□□ -1.21
DEPDC1B-203ENST00000505017 HHIPL2Q6UWX4 724 aa7.5□□□□□ -1.21
DEPDC1B-203ENST00000505017 KYQ8NBH2 561 aa7.5□□□□□ -1.21
DEPDC1B-203ENST00000505017 ARRDC4Q8NCT1 418 aa7.5□□□□□ -1.21
DEPDC1B-203ENST00000505017 TRMT2BQ96GJ1 504 aaKnown RBP7.5□□□□□ -1.21
DEPDC1B-203ENST00000505017 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.5□□□□□ -1.21
DEPDC1B-203ENST00000505017 PCDHA2Q9Y5H9 948 aa7.5□□□□□ -1.21
DEPDC1B-203ENST00000505017 A0A1W2PQU0 124 aa7.49□□□□□ -1.21
DEPDC1B-203ENST00000505017 TADA3O75528 432 aa7.49□□□□□ -1.21
DEPDC1B-203ENST00000505017 LTBRP36941 435 aa7.49□□□□□ -1.21
DEPDC1B-203ENST00000505017 KCNAB2Q13303 367 aa7.49□□□□□ -1.21
DEPDC1B-203ENST00000505017 FXNQ16595 210 aa7.49□□□□□ -1.21
DEPDC1B-203ENST00000505017 TMEM169Q96HH4 297 aa7.49□□□□□ -1.21
DEPDC1B-203ENST00000505017 LRP2BPQ9P2M1 347 aa7.49□□□□□ -1.21
DEPDC1B-203ENST00000505017 RAPGEF2Q9Y4G8 1499 aa7.49□□□□□ -1.21
DEPDC1B-203ENST00000505017 MSCO60682 206 aa7.48□□□□□ -1.21
DEPDC1B-203ENST00000505017 ADRB1P08588 477 aa7.48□□□□□ -1.21
DEPDC1B-203ENST00000505017 GJA9P57773 515 aa7.48□□□□□ -1.21
DEPDC1B-203ENST00000505017 PPP2R2AP63151 447 aa7.48□□□□□ -1.21
DEPDC1B-203ENST00000505017 TTLL7Q6ZT98 887 aa7.48□□□□□ -1.21
DEPDC1B-203ENST00000505017 VPS37DQ86XT2 251 aa7.48□□□□□ -1.21
DEPDC1B-203ENST00000505017 HNRNPLLQ8WVV9 542 aaKnown RBP7.48□□□□□ -1.21
DEPDC1B-203ENST00000505017 CCDC140Q96MF4 163 aa7.48□□□□□ -1.21
DEPDC1B-203ENST00000505017 GAPVD1Q14C86 1478 aa7.48□□□□□ -1.21
DEPDC1B-203ENST00000505017 CARMIL1Q5VZK9 1371 aa7.47□□□□□ -1.21
DEPDC1B-203ENST00000505017 CEP162Q5TB80 1403 aa7.47□□□□□ -1.21
DEPDC1B-203ENST00000505017 TCRBV5S2A0A599 114 aa7.47□□□□□ -1.21
DEPDC1B-203ENST00000505017 CPP00450 1065 aa7.47□□□□□ -1.21
DEPDC1B-203ENST00000505017 KCNJ6P48051 423 aa7.47□□□□□ -1.21
DEPDC1B-203ENST00000505017 RGL3Q3MIN7 710 aa7.47□□□□□ -1.21
DEPDC1B-203ENST00000505017 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.47□□□□□ -1.21
DEPDC1B-203ENST00000505017 SSBP3Q9BWW4 388 aaPredicted RBP7.47□□□□□ -1.21
DEPDC1B-203ENST00000505017 KRTAP3-1Q9BYR8 98 aa7.47□□□□□ -1.21
DEPDC1B-203ENST00000505017 ST7Q9NRC1 585 aa7.47□□□□□ -1.21
DEPDC1B-203ENST00000505017 ZNF652Q9Y2D9 606 aa7.47□□□□□ -1.21
DEPDC1B-203ENST00000505017 H7BY64 318 aa7.46□□□□□ -1.22
DEPDC1B-203ENST00000505017 KLF4O43474 513 aa7.46□□□□□ -1.22
DEPDC1B-203ENST00000505017 DLX3O60479 287 aa7.46□□□□□ -1.22
DEPDC1B-203ENST00000505017 ITGB3P05106 788 aa7.46□□□□□ -1.22
DEPDC1B-203ENST00000505017 LSAMPQ13449 338 aa7.46□□□□□ -1.22
DEPDC1B-203ENST00000505017 SPATS1Q496A3 300 aa7.46□□□□□ -1.22
DEPDC1B-203ENST00000505017 EMC4Q5J8M3 183 aa7.46□□□□□ -1.22
DEPDC1B-203ENST00000505017 MCTP2Q6DN12 878 aa7.46□□□□□ -1.22
DEPDC1B-203ENST00000505017 RBPJLQ9UBG7 517 aa7.46□□□□□ -1.22
DEPDC1B-203ENST00000505017 PPARGC1AQ9UBK2 798 aaKnown RBP7.46□□□□□ -1.22
DEPDC1B-203ENST00000505017 DDX3XO00571 662 aaKnown RBP eCLIP7.45□□□□□ -1.22
DEPDC1B-203ENST00000505017 HGSO14964 777 aaPredicted RBP7.45□□□□□ -1.22
DEPDC1B-203ENST00000505017 SMARCA5O60264 1052 aaPredicted RBP7.45□□□□□ -1.22
DEPDC1B-203ENST00000505017 LRG1P02750 347 aa7.45□□□□□ -1.22
DEPDC1B-203ENST00000505017 GTF2A2P52657 109 aa7.45□□□□□ -1.22
DEPDC1B-203ENST00000505017 TBC1D10BQ4KMP7 808 aaPredicted RBP7.45□□□□□ -1.22
DEPDC1B-203ENST00000505017 EEPD1Q7L9B9 569 aa7.45□□□□□ -1.22
DEPDC1B-203ENST00000505017 TTLL6Q8N841 843 aa7.45□□□□□ -1.22
DEPDC1B-203ENST00000505017 TXNDC5Q8NBS9 432 aaKnown RBP7.45□□□□□ -1.22
DEPDC1B-203ENST00000505017 IER2Q9BTL4 223 aa7.45□□□□□ -1.22
DEPDC1B-203ENST00000505017 CLDND1Q9NY35 253 aa7.45□□□□□ -1.22
DEPDC1B-203ENST00000505017 PBRM1Q86U86 1689 aa7.44□□□□□ -1.22
DEPDC1B-203ENST00000505017 ZNF28P17035 718 aa7.44□□□□□ -1.22
DEPDC1B-203ENST00000505017 ARID5AQ03989 594 aa7.44□□□□□ -1.22
DEPDC1B-203ENST00000505017 STEAP3Q658P3 488 aa7.44□□□□□ -1.22
DEPDC1B-203ENST00000505017 TEPPQ6URK8 271 aa7.44□□□□□ -1.22
DEPDC1B-203ENST00000505017 DBX2Q6ZNG2 339 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms