RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 NFXL1Q6ZNB6 911 aa14.79□□□□□ -0.04
RNF4-206ENST00000504782 SESTD1Q86VW0 696 aa14.79□□□□□ -0.04
RNF4-206ENST00000504782 SAMD3Q8N6K7 520 aa14.79□□□□□ -0.04
RNF4-206ENST00000504782 CTCFLQ8NI51 663 aaPredicted RBP14.79□□□□□ -0.04
RNF4-206ENST00000504782 SPATA33Q96N06 139 aa14.79□□□□□ -0.04
RNF4-206ENST00000504782 SPZ1Q9BXG8 430 aa14.79□□□□□ -0.04
RNF4-206ENST00000504782 PRDM6Q9NQX0 595 aa14.79□□□□□ -0.04
RNF4-206ENST00000504782 GTF2IRD1Q9UHL9 959 aa14.79□□□□□ -0.04
RNF4-206ENST00000504782 NOD1Q9Y239 953 aa14.79□□□□□ -0.04
RNF4-206ENST00000504782 PRUNE2Q8WUY3 3088 aa14.78□□□□□ -0.04
RNF4-206ENST00000504782 CHD9Q3L8U1 2897 aa14.78□□□□□ -0.04
RNF4-206ENST00000504782 FRMPD4Q14CM0 1322 aa14.78□□□□□ -0.04
RNF4-206ENST00000504782 PITPNM1O00562 1244 aa14.78□□□□□ -0.04
RNF4-206ENST00000504782 MEIS2O14770 477 aa14.78□□□□□ -0.04
RNF4-206ENST00000504782 F2P00734 622 aa14.78□□□□□ -0.04
RNF4-206ENST00000504782 HOXD8P13378 290 aaPredicted RBP14.78□□□□□ -0.04
RNF4-206ENST00000504782 CCDC82Q8N4S0 544 aa14.78□□□□□ -0.04
RNF4-206ENST00000504782 RETREG2Q8NC44 543 aa14.78□□□□□ -0.04
RNF4-206ENST00000504782 TCEANC2Q96MN5 208 aa14.78□□□□□ -0.04
RNF4-206ENST00000504782 MAP3K14Q99558 947 aa14.78□□□□□ -0.04
RNF4-206ENST00000504782 C16orf70Q9BSU1 422 aa14.78□□□□□ -0.04
RNF4-206ENST00000504782 MTIF3Q9H2K0 278 aaKnown RBP14.78□□□□□ -0.04
RNF4-206ENST00000504782 MSRAQ9UJ68 235 aa14.78□□□□□ -0.04
RNF4-206ENST00000504782 MYO9BQ13459 2157 aa14.77□□□□□ -0.04
RNF4-206ENST00000504782 CCDC69A6NI79 296 aa14.77□□□□□ -0.05
RNF4-206ENST00000504782 ARHGEF15O94989 841 aa14.77□□□□□ -0.05
RNF4-206ENST00000504782 ATP2A2P16615 1042 aaKnown RBP14.77□□□□□ -0.05
RNF4-206ENST00000504782 BFSP2Q13515 415 aa14.77□□□□□ -0.05
RNF4-206ENST00000504782 RAB30Q15771 203 aa14.77□□□□□ -0.05
RNF4-206ENST00000504782 ADCK5Q3MIX3 580 aa14.77□□□□□ -0.05
RNF4-206ENST00000504782 BMP2KLQ5H9B9 411 aa14.77□□□□□ -0.05
RNF4-206ENST00000504782 TRAF7Q6Q0C0 670 aa14.77□□□□□ -0.05
RNF4-206ENST00000504782 CENPQQ7L2Z9 268 aaPredicted RBP14.77□□□□□ -0.05
RNF4-206ENST00000504782 TMCO2Q7Z6W1 182 aaPredicted RBP14.77□□□□□ -0.05
RNF4-206ENST00000504782 RASEFQ8IZ41 740 aa14.77□□□□□ -0.05
RNF4-206ENST00000504782 C7orf31Q8N865 590 aa14.77□□□□□ -0.05
RNF4-206ENST00000504782 PPM1EQ8WY54 764 aa14.77□□□□□ -0.05
RNF4-206ENST00000504782 RRP36Q96EU6 259 aaKnown RBP14.77□□□□□ -0.05
RNF4-206ENST00000504782 TMEM87BQ96K49 555 aa14.77□□□□□ -0.05
RNF4-206ENST00000504782 FTOQ9C0B1 505 aaKnown RBP eCLIP14.77□□□□□ -0.05
RNF4-206ENST00000504782 NBNO60934 754 aa14.76□□□□□ -0.05
RNF4-206ENST00000504782 PPFIA4O75335 1185 aa14.76□□□□□ -0.05
RNF4-206ENST00000504782 PFKMP08237 780 aa14.76□□□□□ -0.05
RNF4-206ENST00000504782 CKBP12277 381 aa14.76□□□□□ -0.05
RNF4-206ENST00000504782 KIF5BP33176 963 aa14.76□□□□□ -0.05
RNF4-206ENST00000504782 LIFRP42702 1097 aa14.76□□□□□ -0.05
RNF4-206ENST00000504782 TRIM71Q2Q1W2 868 aaKnown RBP14.76□□□□□ -0.05
RNF4-206ENST00000504782 SMARCC2Q8TAQ2 1214 aa14.76□□□□□ -0.05
RNF4-206ENST00000504782 INPP4AQ96PE3 977 aaPredicted RBP14.76□□□□□ -0.05
RNF4-206ENST00000504782 MTA3Q9BTC8 594 aa14.76□□□□□ -0.05
RNF4-206ENST00000504782 MLXIPQ9HAP2 919 aa14.76□□□□□ -0.05
RNF4-206ENST00000504782 SLC28A3Q9HAS3 691 aa14.76□□□□□ -0.05
RNF4-206ENST00000504782 BRPF3Q9ULD4 1205 aa14.76□□□□□ -0.05
RNF4-206ENST00000504782 A0A0C4DFX4 3053 aa14.76□□□□□ -0.05
RNF4-206ENST00000504782 SPATA31C2B4DYI2 1134 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 RFXAPO00287 272 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 TGFB3P10600 412 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 SELPP16109 830 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 SMARCA1P28370 1054 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 ICAM3P32942 547 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 RFC2P35250 354 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 EXOSC10Q01780 885 aaKnown RBP14.75□□□□□ -0.05
RNF4-206ENST00000504782 TRAF1Q13077 416 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 MBTPS1Q14703 1052 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 CCDC85BQ15834 202 aaPredicted RBP14.75□□□□□ -0.05
RNF4-206ENST00000504782 UBE2SQ16763 222 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 ZNF618Q5T7W0 954 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 KCNV1Q6PIU1 500 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 LRRC8DQ7L1W4 858 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 CYFIP1Q7L576 1253 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 SPRED2Q7Z698 418 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 MICU3Q86XE3 530 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 FANCBQ8NB91 859 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 CAGE1Q8TC20 777 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 AFAP1L1Q8TED9 768 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 OSBPL7Q9BZF2 842 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 CERS4Q9HA82 394 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 PCDHA11Q9Y5I1 949 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 SLC12A7Q9Y666 1083 aa14.75□□□□□ -0.05
RNF4-206ENST00000504782 VCANP13611 3396 aa14.74□□□□□ -0.05
RNF4-206ENST00000504782 EPOPA6NHQ4 379 aa14.74□□□□□ -0.05
RNF4-206ENST00000504782 PIK3CDO00329 1044 aa14.74□□□□□ -0.05
RNF4-206ENST00000504782 LGALS2P05162 132 aa14.74□□□□□ -0.05
RNF4-206ENST00000504782 CA3P07451 260 aa14.74□□□□□ -0.05
RNF4-206ENST00000504782 IGFBP4P22692 258 aa14.74□□□□□ -0.05
RNF4-206ENST00000504782 RBL2Q08999 1139 aa14.74□□□□□ -0.05
RNF4-206ENST00000504782 PPP2R2DQ66LE6 453 aa14.74□□□□□ -0.05
RNF4-206ENST00000504782 TMTC3Q6ZXV5 915 aa14.74□□□□□ -0.05
RNF4-206ENST00000504782 TRIM50Q86XT4 487 aa14.74□□□□□ -0.05
RNF4-206ENST00000504782 TMTC2Q8N394 836 aa14.74□□□□□ -0.05
RNF4-206ENST00000504782 NEK1Q96PY6 1258 aa14.74□□□□□ -0.05
RNF4-206ENST00000504782 GAS2L1Q99501 681 aaPredicted RBP14.74□□□□□ -0.05
RNF4-206ENST00000504782 LZTS2Q9BRK4 669 aa14.74□□□□□ -0.05
RNF4-206ENST00000504782 KATNAL1Q9BW62 490 aa14.74□□□□□ -0.05
RNF4-206ENST00000504782 SEC63Q9UGP8 760 aaKnown RBP14.74□□□□□ -0.05
RNF4-206ENST00000504782 CHD7Q9P2D1 2997 aa14.73□□□□□ -0.05
RNF4-206ENST00000504782 H3BRB1 525 aa14.73□□□□□ -0.05
RNF4-206ENST00000504782 ATP9AO75110 1047 aa14.73□□□□□ -0.05
RNF4-206ENST00000504782 ACTN1P12814 892 aa14.73□□□□□ -0.05
RNF4-206ENST00000504782 CPA1P15085 419 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms