RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 SEC23AQ15436 765 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 GBP6Q6ZN66 633 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 JMJD4Q9H9V9 463 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 MYO1AQ9UBC5 1043 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 STXBP3O00186 592 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 SLURP2P0DP57 97 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 EVX2Q03828 476 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 EXOC3L4Q17RC7 722 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 ACER1Q8TDN7 264 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 NOX5Q96PH1 765 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 IWS1Q96ST2 819 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 NALCNQ8IZF0 1738 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 BUB1O43683 1085 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 BCRP11274 1271 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 MARK3P27448 753 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 ETF1P62495 437 aaKnown RBP15.51■□□□□ 0.07
TCOF1-207ENST00000504761 MTMR1Q13613 665 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 SLC7A3Q8WY07 619 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 PPP1R16BQ96T49 567 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 TSGA10Q9BZW7 698 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 MYOZ2Q9NPC6 264 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 GGA3Q9NZ52 723 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 EEF1GP26641 437 aaKnown RBP15.5■□□□□ 0.07
TCOF1-207ENST00000504761 ECE1P42892 770 aa15.5■□□□□ 0.07
TCOF1-207ENST00000504761 SLC16A10Q8TF71 515 aa15.5■□□□□ 0.07
TCOF1-207ENST00000504761 DEFB129Q9H1M3 183 aa15.5■□□□□ 0.07
TCOF1-207ENST00000504761 RPAP3Q9H6T3 665 aaPredicted RBP15.5■□□□□ 0.07
TCOF1-207ENST00000504761 MAD2L2Q9UI95 211 aa15.5■□□□□ 0.07
TCOF1-207ENST00000504761 PRR12Q9ULL5 1215 aa15.5■□□□□ 0.07
TCOF1-207ENST00000504761 KIFAP3Q92845 792 aa15.5■□□□□ 0.07
TCOF1-207ENST00000504761 PARVGQ9HBI0 331 aa15.5■□□□□ 0.07
TCOF1-207ENST00000504761 NYAP2Q9P242 653 aa15.5■□□□□ 0.07
TCOF1-207ENST00000504761 ADD3Q9UEY8 706 aaKnown RBP15.5■□□□□ 0.07
TCOF1-207ENST00000504761 H0YHG0 523 aa15.5■□□□□ 0.07
TCOF1-207ENST00000504761 IL1R1P14778 569 aa15.5■□□□□ 0.07
TCOF1-207ENST00000504761 PDXDC2PQ6P474 469 aa15.5■□□□□ 0.07
TCOF1-207ENST00000504761 CCDC51Q96ER9 411 aa15.5■□□□□ 0.07
TCOF1-207ENST00000504761 HINFPQ9BQA5 517 aa15.5■□□□□ 0.07
TCOF1-207ENST00000504761 RIC8AQ9NPQ8 531 aa15.5■□□□□ 0.07
TCOF1-207ENST00000504761 RGL1Q9NZL6 768 aa15.5■□□□□ 0.07
TCOF1-207ENST00000504761 KIAA1524Q8TCG1 905 aa15.49■□□□□ 0.07
TCOF1-207ENST00000504761 ERO1AQ96HE7 468 aa15.49■□□□□ 0.07
TCOF1-207ENST00000504761 RIC1Q4ADV7 1423 aa15.49■□□□□ 0.07
TCOF1-207ENST00000504761 STX10O60499 249 aa15.49■□□□□ 0.07
TCOF1-207ENST00000504761 FCER1AP12319 257 aa15.49■□□□□ 0.07
TCOF1-207ENST00000504761 NTRK3Q16288 839 aa15.49■□□□□ 0.07
TCOF1-207ENST00000504761 NBPF9Q3BBW0 867 aa15.49■□□□□ 0.07
TCOF1-207ENST00000504761 VSTM4Q8IW00 320 aa15.49■□□□□ 0.07
TCOF1-207ENST00000504761 FAM186BQ8IYM0 893 aa15.49■□□□□ 0.07
TCOF1-207ENST00000504761 DYDC2Q96IM9 177 aa15.49■□□□□ 0.07
TCOF1-207ENST00000504761 AKAP12Q02952 1782 aa15.49■□□□□ 0.07
TCOF1-207ENST00000504761 SOWAHDA6NJG2 315 aa15.49■□□□□ 0.07
TCOF1-207ENST00000504761 PLSCR1O15162 318 aa15.49■□□□□ 0.07
TCOF1-207ENST00000504761 MYL1P05976 194 aa15.49■□□□□ 0.07
TCOF1-207ENST00000504761 CCND2P30279 289 aa15.49■□□□□ 0.07
TCOF1-207ENST00000504761 CXCL9Q07325 125 aa15.49■□□□□ 0.07
TCOF1-207ENST00000504761 NRBP2Q9NSY0 501 aa15.49■□□□□ 0.07
TCOF1-207ENST00000504761 METTL14Q9HCE5 456 aaKnown RBP15.49■□□□□ 0.07
TCOF1-207ENST00000504761 DDX4Q9NQI0 724 aaKnown RBP15.49■□□□□ 0.07
TCOF1-207ENST00000504761 XRN1Q8IZH2 1706 aaKnown RBP15.48■□□□□ 0.07
TCOF1-207ENST00000504761 LTN1O94822 1766 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 INO80B-WBP1J3KQ70 363 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 CEP104O60308 925 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 PRPHP41219 470 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 CCDC144BQ3MJ40 725 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 HOOK3Q86VS8 718 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 SFR1Q86XK3 245 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 INO80BQ9C086 356 aaPredicted RBP15.48■□□□□ 0.07
TCOF1-207ENST00000504761 KMT5AQ9NQR1 393 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 ZNF215Q9UL58 517 aaPredicted RBP15.48■□□□□ 0.07
TCOF1-207ENST00000504761 IPO5O00410 1097 aaKnown RBP15.48■□□□□ 0.07
TCOF1-207ENST00000504761 LRRN2O75325 713 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 MAN2A1Q16706 1144 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 DYDC1Q8WWB3 177 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 ZDHHC15Q96MV8 337 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 AGXT2Q9BYV1 514 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 ZHX1Q9UKY1 873 aaPredicted RBP15.48■□□□□ 0.07
TCOF1-207ENST00000504761 GOLGA8IPA6NC78 632 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 GOLGA8JA6NMD2 632 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 OSBPP22059 807 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 CA8P35219 290 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 PEX3P56589 373 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 CYP27A1Q02318 531 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 TCP11X2Q5H9J9 407 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 APOBEC3FQ8IUX4 373 aaKnown RBP15.48■□□□□ 0.07
TCOF1-207ENST00000504761 CDAN1Q8IWY9 1227 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 ACRBPQ8NEB7 543 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 HOXC10Q9NYD6 342 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 USTQ9Y2C2 406 aa15.48■□□□□ 0.07
TCOF1-207ENST00000504761 CCNA1P78396 465 aa15.47■□□□□ 0.07
TCOF1-207ENST00000504761 UNC13DQ70J99 1090 aa15.47■□□□□ 0.07
TCOF1-207ENST00000504761 ZBTB8OSQ8IWT0 167 aa15.47■□□□□ 0.07
TCOF1-207ENST00000504761 MYRIPQ8NFW9 859 aa15.47■□□□□ 0.07
TCOF1-207ENST00000504761 TRIM31Q9BZY9 425 aa15.47■□□□□ 0.07
TCOF1-207ENST00000504761 IL17RBQ9NRM6 502 aa15.47■□□□□ 0.07
TCOF1-207ENST00000504761 TEX33O43247 280 aa15.47■□□□□ 0.07
TCOF1-207ENST00000504761 ACTN2P35609 894 aa15.47■□□□□ 0.07
TCOF1-207ENST00000504761 Q3C1V9 767 aa15.47■□□□□ 0.07
TCOF1-207ENST00000504761 GSTA5Q7RTV2 222 aa15.47■□□□□ 0.07
TCOF1-207ENST00000504761 ZFPM1Q8IX07 1006 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms