RNA–Protein interactions for RNA: ENST00000504616.1

AP003478.1-201, humanhuman

BASIC

Gene AP003478.1, Length 833 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003478.1-201ENST00000504616 NOP56O00567 594 aaKnown RBP12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 MEIS2O14770 477 aa12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 STAM2O75886 525 aa12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 CENPBP07199 599 aaPredicted RBP12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 TGFB3P10600 412 aa12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 METAP2P50579 478 aaKnown RBP eCLIP12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 NAPAP54920 295 aa12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 MRPS9P82933 396 aaKnown RBP12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 SMAD3P84022 425 aaKnown RBP12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 PTPN11Q06124 597 aaPredicted RBP12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 APOBRQ0VD83 1088 aa12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 UBE2SQ16763 222 aa12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 TMEM240Q5SV17 173 aa12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 CELF3Q5SZQ8 465 aaKnown RBP12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 MYSM1Q5VVJ2 828 aa12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 Q6ZUG5 572 aa12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 ZNF365Q70YC5 407 aa12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 BRF1Q92994 677 aa12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 SCLYQ96I15 445 aa12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 ALG1Q9BT22 464 aa12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 KATNAL1Q9BW62 490 aa12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 WNT8AQ9H1J5 351 aa12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 IL23AQ9NPF7 189 aa12.03□□□□□ -0.48
AP003478.1-201ENST00000504616 COL6A3P12111 3177 aa12.02□□□□□ -0.48
AP003478.1-201ENST00000504616 FIBPO43427 364 aa12.02□□□□□ -0.49
AP003478.1-201ENST00000504616 PSEN2P49810 448 aa12.02□□□□□ -0.49
AP003478.1-201ENST00000504616 SP2Q02086 613 aa12.02□□□□□ -0.49
AP003478.1-201ENST00000504616 MFSD10Q14728 455 aa12.02□□□□□ -0.49
AP003478.1-201ENST00000504616 PTGISQ16647 500 aa12.02□□□□□ -0.49
AP003478.1-201ENST00000504616 KIAA0753Q2KHM9 967 aa12.02□□□□□ -0.49
AP003478.1-201ENST00000504616 HSDL1Q3SXM5 330 aa12.02□□□□□ -0.49
AP003478.1-201ENST00000504616 PCNX4Q63HM2 1172 aa12.02□□□□□ -0.49
AP003478.1-201ENST00000504616 WWC2Q6AWC2 1192 aa12.02□□□□□ -0.49
AP003478.1-201ENST00000504616 C16orf59Q7L2K0 433 aa12.02□□□□□ -0.49
AP003478.1-201ENST00000504616 C7orf31Q8N865 590 aa12.02□□□□□ -0.49
AP003478.1-201ENST00000504616 KAT2BQ92831 832 aa12.02□□□□□ -0.49
AP003478.1-201ENST00000504616 INPP4AQ96PE3 977 aaPredicted RBP12.02□□□□□ -0.49
AP003478.1-201ENST00000504616 MTIF3Q9H2K0 278 aaKnown RBP12.02□□□□□ -0.49
AP003478.1-201ENST00000504616 MTMR10Q9NXD2 777 aa12.02□□□□□ -0.49
AP003478.1-201ENST00000504616 GBF1Q92538 1859 aa12.02□□□□□ -0.49
AP003478.1-201ENST00000504616 TRIP12Q14669 1992 aaPredicted RBP12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 F2P00734 622 aa12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 FGBP02675 491 aa12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 RPS6KB1P23443 525 aa12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 PSMA5P28066 241 aa12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 CDC27P30260 824 aa12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 SP4Q02446 784 aa12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 BFSP2Q13515 415 aa12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 NEDD9Q14511 834 aa12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 FAM109BQ6ICB4 259 aaPredicted RBP12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 GDF6Q6KF10 455 aaPredicted RBP12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 XRRA1Q6P2D8 792 aa12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 CYFIP1Q7L576 1253 aa12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 OTOP2Q7RTS6 562 aa12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 DEFB128Q7Z7B8 93 aa12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 NLRX1Q86UT6 975 aa12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 RPUSD2Q8IZ73 545 aaKnown RBP12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 CCDC155Q8N6L0 562 aa12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 RETREG2Q8NC44 543 aa12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 KCNB2Q92953 911 aa12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 EHMT1Q9H9B1 1298 aa12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 HDAC6Q9UBN7 1215 aa12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 V9GY48 417 aaPredicted RBP12.01□□□□□ -0.49
AP003478.1-201ENST00000504616 HSFX4A0A1B0GTS1 333 aaPredicted RBP12□□□□□ -0.49
AP003478.1-201ENST00000504616 CCDC196A0A1B0GTZ2 297 aa12□□□□□ -0.49
AP003478.1-201ENST00000504616 HSFX3A0A1B0GWH4 333 aaPredicted RBP12□□□□□ -0.49
AP003478.1-201ENST00000504616 ZBBXA8MT70 800 aa12□□□□□ -0.49
AP003478.1-201ENST00000504616 SPATA31C2B4DYI2 1134 aa12□□□□□ -0.49
AP003478.1-201ENST00000504616 PITPNM1O00562 1244 aa12□□□□□ -0.49
AP003478.1-201ENST00000504616 PPFIA4O75335 1185 aa12□□□□□ -0.49
AP003478.1-201ENST00000504616 DNAJB2P25686 324 aa12□□□□□ -0.49
AP003478.1-201ENST00000504616 ICAM3P32942 547 aa12□□□□□ -0.49
AP003478.1-201ENST00000504616 ADCY7P51828 1080 aa12□□□□□ -0.49
AP003478.1-201ENST00000504616 RCAN1P53805 252 aa12□□□□□ -0.49
AP003478.1-201ENST00000504616 SEMA3FQ13275 785 aa12□□□□□ -0.49
AP003478.1-201ENST00000504616 PPP1R18Q6NYC8 613 aa12□□□□□ -0.49
AP003478.1-201ENST00000504616 SESTD1Q86VW0 696 aa12□□□□□ -0.49
AP003478.1-201ENST00000504616 PKD2L1Q9P0L9 805 aa12□□□□□ -0.49
AP003478.1-201ENST00000504616 GTF2IRD1Q9UHL9 959 aa12□□□□□ -0.49
AP003478.1-201ENST00000504616 PCDHA6Q9UN73 950 aa12□□□□□ -0.49
AP003478.1-201ENST00000504616 PCDHA8Q9Y5H6 950 aa12□□□□□ -0.49
AP003478.1-201ENST00000504616 CDH23Q9H251 3354 aa11.99□□□□□ -0.49
AP003478.1-201ENST00000504616 GRXCR1A8MXD5 290 aa11.99□□□□□ -0.49
AP003478.1-201ENST00000504616 hCG_1984214I3L0E3 225 aa11.99□□□□□ -0.49
AP003478.1-201ENST00000504616 STXBP3O00186 592 aa11.99□□□□□ -0.49
AP003478.1-201ENST00000504616 HOXD8P13378 290 aaPredicted RBP11.99□□□□□ -0.49
AP003478.1-201ENST00000504616 ADD1P35611 737 aaKnown RBP11.99□□□□□ -0.49
AP003478.1-201ENST00000504616 FUT2Q10981 343 aa11.99□□□□□ -0.49
AP003478.1-201ENST00000504616 MTMR1Q13613 665 aa11.99□□□□□ -0.49
AP003478.1-201ENST00000504616 ERICH6BQ5W0A0 696 aa11.99□□□□□ -0.49
AP003478.1-201ENST00000504616 TYW1BQ6NUM6 668 aa11.99□□□□□ -0.49
AP003478.1-201ENST00000504616 METTL7BQ6UX53 244 aa11.99□□□□□ -0.49
AP003478.1-201ENST00000504616 ZNF713Q8N859 430 aaPredicted RBP11.99□□□□□ -0.49
AP003478.1-201ENST00000504616 CAGE1Q8TC20 777 aa11.99□□□□□ -0.49
AP003478.1-201ENST00000504616 HERVK_113Q902F9 699 aa11.99□□□□□ -0.49
AP003478.1-201ENST00000504616 CDHR1Q96JP9 859 aa11.99□□□□□ -0.49
AP003478.1-201ENST00000504616 PGBD1Q96JS3 809 aa11.99□□□□□ -0.49
AP003478.1-201ENST00000504616 FTOQ9C0B1 505 aaKnown RBP eCLIP11.99□□□□□ -0.49
AP003478.1-201ENST00000504616 BCAS3Q9H6U6 928 aa11.99□□□□□ -0.49
AP003478.1-201ENST00000504616 RIC8AQ9NPQ8 531 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms