RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 CYP46A1Q9Y6A2 500 aa16.37■□□□□ 0.21
HOXC9-202ENST00000504557 PIK3CDO00329 1044 aa16.36■□□□□ 0.21
HOXC9-202ENST00000504557 ADCY7P51828 1080 aa16.36■□□□□ 0.21
HOXC9-202ENST00000504557 FUT2Q10981 343 aa16.36■□□□□ 0.21
HOXC9-202ENST00000504557 STK3Q13188 491 aa16.36■□□□□ 0.21
HOXC9-202ENST00000504557 HSDL1Q3SXM5 330 aa16.36■□□□□ 0.21
HOXC9-202ENST00000504557 LRIT3Q3SXY7 679 aa16.36■□□□□ 0.21
HOXC9-202ENST00000504557 CELF3Q5SZQ8 465 aaKnown RBP16.36■□□□□ 0.21
HOXC9-202ENST00000504557 MYSM1Q5VVJ2 828 aa16.36■□□□□ 0.21
HOXC9-202ENST00000504557 MFSD5Q6N075 450 aa16.36■□□□□ 0.21
HOXC9-202ENST00000504557 KCNV1Q6PIU1 500 aa16.36■□□□□ 0.21
HOXC9-202ENST00000504557 PPTC7Q8NI37 304 aa16.36■□□□□ 0.21
HOXC9-202ENST00000504557 PHKBQ93100 1093 aa16.36■□□□□ 0.21
HOXC9-202ENST00000504557 NCOA5Q9HCD5 579 aaKnown RBP16.36■□□□□ 0.21
HOXC9-202ENST00000504557 PCDHA6Q9UN73 950 aa16.36■□□□□ 0.21
HOXC9-202ENST00000504557 PCDHA8Q9Y5H6 950 aa16.36■□□□□ 0.21
HOXC9-202ENST00000504557 FRMPD4Q14CM0 1322 aa16.36■□□□□ 0.21
HOXC9-202ENST00000504557 GBF1Q92538 1859 aa16.35■□□□□ 0.21
HOXC9-202ENST00000504557 CCDC196A0A1B0GTZ2 297 aa16.35■□□□□ 0.21
HOXC9-202ENST00000504557 SMCO2A6NFE2 343 aa16.35■□□□□ 0.21
HOXC9-202ENST00000504557 STXBP3O00186 592 aa16.35■□□□□ 0.21
HOXC9-202ENST00000504557 NOP56O00567 594 aaKnown RBP16.35■□□□□ 0.21
HOXC9-202ENST00000504557 AKAP17AQ02040 695 aaKnown RBP16.35■□□□□ 0.21
HOXC9-202ENST00000504557 PPIGQ13427 754 aaKnown RBP eCLIP16.35■□□□□ 0.21
HOXC9-202ENST00000504557 PCNX4Q63HM2 1172 aa16.35■□□□□ 0.21
HOXC9-202ENST00000504557 CYFIP1Q7L576 1253 aa16.35■□□□□ 0.21
HOXC9-202ENST00000504557 SCLYQ96I15 445 aa16.35■□□□□ 0.21
HOXC9-202ENST00000504557 NOC4LQ9BVI4 516 aaKnown RBP16.35■□□□□ 0.21
HOXC9-202ENST00000504557 TMEM260Q9NX78 707 aa16.35■□□□□ 0.21
HOXC9-202ENST00000504557 LAMA3Q16787 3333 aa16.35■□□□□ 0.21
HOXC9-202ENST00000504557 SZT2Q5T011 3432 aa16.34■□□□□ 0.21
HOXC9-202ENST00000504557 TANC1Q9C0D5 1861 aa16.34■□□□□ 0.21
HOXC9-202ENST00000504557 FIBPO43427 364 aa16.34■□□□□ 0.21
HOXC9-202ENST00000504557 SUPT20HL2P0C7V6 817 aa16.34■□□□□ 0.21
HOXC9-202ENST00000504557 PSEN2P49810 448 aa16.34■□□□□ 0.21
HOXC9-202ENST00000504557 SEMA3FQ13275 785 aa16.34■□□□□ 0.21
HOXC9-202ENST00000504557 TOB2Q14106 344 aaPredicted RBP16.34■□□□□ 0.21
HOXC9-202ENST00000504557 MFSD10Q14728 455 aa16.34■□□□□ 0.21
HOXC9-202ENST00000504557 NFRKBQ6P4R8 1299 aa16.34■□□□□ 0.21
HOXC9-202ENST00000504557 NLRX1Q86UT6 975 aa16.34■□□□□ 0.21
HOXC9-202ENST00000504557 C7orf31Q8N865 590 aa16.34■□□□□ 0.21
HOXC9-202ENST00000504557 KAT2BQ92831 832 aa16.34■□□□□ 0.21
HOXC9-202ENST00000504557 FAM161BQ96MY7 647 aa16.34■□□□□ 0.21
HOXC9-202ENST00000504557 INPP4AQ96PE3 977 aaPredicted RBP16.34■□□□□ 0.21
HOXC9-202ENST00000504557 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.34■□□□□ 0.21
HOXC9-202ENST00000504557 SLC26A6Q9BXS9 759 aa16.34■□□□□ 0.21
HOXC9-202ENST00000504557 SEZ6LQ9BYH1 1024 aa16.34■□□□□ 0.21
HOXC9-202ENST00000504557 EHMT1Q9H9B1 1298 aa16.34■□□□□ 0.21
HOXC9-202ENST00000504557 ZSWIM6Q9HCJ5 1215 aa16.34■□□□□ 0.21
HOXC9-202ENST00000504557 PDRG1Q9NUG6 133 aa16.34■□□□□ 0.21
HOXC9-202ENST00000504557 STAM2O75886 525 aa16.33■□□□□ 0.2
HOXC9-202ENST00000504557 TGFB3P10600 412 aa16.33■□□□□ 0.2
HOXC9-202ENST00000504557 SCG2P13521 617 aa16.33■□□□□ 0.2
HOXC9-202ENST00000504557 PDIA3P30101 505 aaKnown RBP16.33■□□□□ 0.2
HOXC9-202ENST00000504557 RCAN1P53805 252 aa16.33■□□□□ 0.2
HOXC9-202ENST00000504557 PTGISQ16647 500 aa16.33■□□□□ 0.2
HOXC9-202ENST00000504557 KIAA0753Q2KHM9 967 aa16.33■□□□□ 0.2
HOXC9-202ENST00000504557 UTP14CQ5TAP6 766 aaKnown RBP16.33■□□□□ 0.2
HOXC9-202ENST00000504557 JAKMIP3Q5VZ66 844 aa16.33■□□□□ 0.2
HOXC9-202ENST00000504557 GDF6Q6KF10 455 aaPredicted RBP16.33■□□□□ 0.2
HOXC9-202ENST00000504557 DEFB128Q7Z7B8 93 aa16.33■□□□□ 0.2
HOXC9-202ENST00000504557 DEFB123Q8N688 67 aa16.33■□□□□ 0.2
HOXC9-202ENST00000504557 EMID1Q96A84 441 aaPredicted RBP16.33■□□□□ 0.2
HOXC9-202ENST00000504557 WNT8AQ9H1J5 351 aa16.33■□□□□ 0.2
HOXC9-202ENST00000504557 RIC8AQ9NPQ8 531 aa16.33■□□□□ 0.2
HOXC9-202ENST00000504557 BARHL2Q9NY43 387 aa16.33■□□□□ 0.2
HOXC9-202ENST00000504557 HDAC6Q9UBN7 1215 aa16.33■□□□□ 0.2
HOXC9-202ENST00000504557 TELO2Q9Y4R8 837 aa16.33■□□□□ 0.2
HOXC9-202ENST00000504557 SPATA31C2B4DYI2 1134 aa16.32■□□□□ 0.2
HOXC9-202ENST00000504557 RBAK-RBAKDNI3L0D1 243 aa16.32■□□□□ 0.2
HOXC9-202ENST00000504557 EPB41L2O43491 1005 aaKnown RBP16.32■□□□□ 0.2
HOXC9-202ENST00000504557 NEDD9Q14511 834 aa16.32■□□□□ 0.2
HOXC9-202ENST00000504557 PFKFB3Q16875 520 aaPredicted RBP16.32■□□□□ 0.2
HOXC9-202ENST00000504557 PPP1R18Q6NYC8 613 aa16.32■□□□□ 0.2
HOXC9-202ENST00000504557 ZNF365Q70YC5 407 aa16.32■□□□□ 0.2
HOXC9-202ENST00000504557 KATNAL1Q9BW62 490 aa16.32■□□□□ 0.2
HOXC9-202ENST00000504557 ANO3Q9BYT9 981 aa16.32■□□□□ 0.2
HOXC9-202ENST00000504557 TET1Q8NFU7 2136 aa16.31■□□□□ 0.2
HOXC9-202ENST00000504557 DTNBO60941 627 aa16.31■□□□□ 0.2
HOXC9-202ENST00000504557 LGALS2P05162 132 aa16.31■□□□□ 0.2
HOXC9-202ENST00000504557 ITGB5P18084 799 aa16.31■□□□□ 0.2
HOXC9-202ENST00000504557 ICAM3P32942 547 aa16.31■□□□□ 0.2
HOXC9-202ENST00000504557 ZNF200P98182 395 aaPredicted RBP16.31■□□□□ 0.2
HOXC9-202ENST00000504557 MTMR1Q13613 665 aa16.31■□□□□ 0.2
HOXC9-202ENST00000504557 TMEM240Q5SV17 173 aa16.31■□□□□ 0.2
HOXC9-202ENST00000504557 XRRA1Q6P2D8 792 aa16.31■□□□□ 0.2
HOXC9-202ENST00000504557 C16orf59Q7L2K0 433 aa16.31■□□□□ 0.2
HOXC9-202ENST00000504557 OTOP2Q7RTS6 562 aa16.31■□□□□ 0.2
HOXC9-202ENST00000504557 TRIM50Q86XT4 487 aa16.31■□□□□ 0.2
HOXC9-202ENST00000504557 RETREG2Q8NC44 543 aa16.31■□□□□ 0.2
HOXC9-202ENST00000504557 UIMC1Q96RL1 719 aa16.31■□□□□ 0.2
HOXC9-202ENST00000504557 AGXT2Q9BYV1 514 aa16.31■□□□□ 0.2
HOXC9-202ENST00000504557 IL23AQ9NPF7 189 aa16.31■□□□□ 0.2
HOXC9-202ENST00000504557 MYO9BQ13459 2157 aa16.31■□□□□ 0.2
HOXC9-202ENST00000504557 ZBBXA8MT70 800 aa16.3■□□□□ 0.2
HOXC9-202ENST00000504557 hCG_1984214I3L0E3 225 aa16.3■□□□□ 0.2
HOXC9-202ENST00000504557 CPLX1O14810 134 aa16.3■□□□□ 0.2
HOXC9-202ENST00000504557 ADAMTS3O15072 1205 aa16.3■□□□□ 0.2
HOXC9-202ENST00000504557 PRPF3O43395 683 aaKnown RBP16.3■□□□□ 0.2
HOXC9-202ENST00000504557 ATP9AO75110 1047 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms