RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 EPB41L1Q9H4G0 881 aa11.19□□□□□ -0.62
EXOSC9-203ENST00000503139 PDLIM7Q9NR12 457 aa11.19□□□□□ -0.62
EXOSC9-203ENST00000503139 CATSPERZQ9NTU4 200 aa11.19□□□□□ -0.62
EXOSC9-203ENST00000503139 KLHL42Q9P2K6 505 aa11.19□□□□□ -0.62
EXOSC9-203ENST00000503139 ADAMTS6Q9UKP5 1117 aa11.19□□□□□ -0.62
EXOSC9-203ENST00000503139 ANGEL1Q9UNK9 670 aaKnown RBP11.19□□□□□ -0.62
EXOSC9-203ENST00000503139 ADAMTS4O75173 837 aa11.18□□□□□ -0.62
EXOSC9-203ENST00000503139 HPXP02790 462 aa11.18□□□□□ -0.62
EXOSC9-203ENST00000503139 ID4P47928 161 aa11.18□□□□□ -0.62
EXOSC9-203ENST00000503139 EXOSC10Q01780 885 aaKnown RBP11.18□□□□□ -0.62
EXOSC9-203ENST00000503139 SLC14A2Q15849 920 aa11.18□□□□□ -0.62
EXOSC9-203ENST00000503139 CRY1Q16526 586 aa11.18□□□□□ -0.62
EXOSC9-203ENST00000503139 MROH9Q5TGP6 573 aa11.18□□□□□ -0.62
EXOSC9-203ENST00000503139 RNF219Q5W0B1 726 aaPredicted RBP11.18□□□□□ -0.62
EXOSC9-203ENST00000503139 CREB3L3Q68CJ9 461 aa11.18□□□□□ -0.62
EXOSC9-203ENST00000503139 OTOP3Q7RTS5 596 aa11.18□□□□□ -0.62
EXOSC9-203ENST00000503139 NECAB2Q7Z6G3 386 aa11.18□□□□□ -0.62
EXOSC9-203ENST00000503139 METTL14Q9HCE5 456 aaKnown RBP11.18□□□□□ -0.62
EXOSC9-203ENST00000503139 SMURF1Q9HCE7 757 aa11.18□□□□□ -0.62
EXOSC9-203ENST00000503139 CRTAC1Q9NQ79 661 aa11.18□□□□□ -0.62
EXOSC9-203ENST00000503139 TCRBV5S4A2TA0A5A2 114 aa11.17□□□□□ -0.62
EXOSC9-203ENST00000503139 AMY2AP04746 511 aa11.17□□□□□ -0.62
EXOSC9-203ENST00000503139 GNAT1P11488 350 aa11.17□□□□□ -0.62
EXOSC9-203ENST00000503139 AMY2BP19961 511 aa11.17□□□□□ -0.62
EXOSC9-203ENST00000503139 GDNFP39905 211 aa11.17□□□□□ -0.62
EXOSC9-203ENST00000503139 FAM50AQ14320 339 aaKnown RBP11.17□□□□□ -0.62
EXOSC9-203ENST00000503139 GPR19Q15760 415 aa11.17□□□□□ -0.62
EXOSC9-203ENST00000503139 NUP43Q8NFH3 380 aa11.17□□□□□ -0.62
EXOSC9-203ENST00000503139 MBNL3Q9NUK0 354 aaKnown RBP11.17□□□□□ -0.62
EXOSC9-203ENST00000503139 APOBEC2Q9Y235 224 aaKnown RBP11.17□□□□□ -0.62
EXOSC9-203ENST00000503139 COA3Q9Y2R0 106 aaPredicted RBP11.17□□□□□ -0.62
EXOSC9-203ENST00000503139 WASHC2CQ9Y4E1 1318 aa11.16□□□□□ -0.62
EXOSC9-203ENST00000503139 PTPDC1A2A3K4 754 aa11.16□□□□□ -0.62
EXOSC9-203ENST00000503139 GAS7O60861 476 aa11.16□□□□□ -0.62
EXOSC9-203ENST00000503139 ATP2A2P16615 1042 aaKnown RBP11.16□□□□□ -0.62
EXOSC9-203ENST00000503139 PRKCAP17252 672 aa11.16□□□□□ -0.62
EXOSC9-203ENST00000503139 TACR1P25103 407 aa11.16□□□□□ -0.62
EXOSC9-203ENST00000503139 GUCY2FP51841 1108 aa11.16□□□□□ -0.62
EXOSC9-203ENST00000503139 JAM2P57087 298 aa11.16□□□□□ -0.62
EXOSC9-203ENST00000503139 ERVFC1P60507 584 aa11.16□□□□□ -0.62
EXOSC9-203ENST00000503139 SPIRE1Q08AE8 756 aa11.16□□□□□ -0.62
EXOSC9-203ENST00000503139 TIGD5Q53EQ6 642 aa11.16□□□□□ -0.62
EXOSC9-203ENST00000503139 OSTM1Q86WC4 334 aa11.16□□□□□ -0.62
EXOSC9-203ENST00000503139 C2orf69Q8N8R5 385 aa11.16□□□□□ -0.62
EXOSC9-203ENST00000503139 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.16□□□□□ -0.62
EXOSC9-203ENST00000503139 ZKSCAN5Q9Y2L8 839 aa11.16□□□□□ -0.62
EXOSC9-203ENST00000503139 NKRFO15226 690 aaKnown RBP eCLIP11.15□□□□□ -0.62
EXOSC9-203ENST00000503139 DGKIO75912 1065 aa11.15□□□□□ -0.62
EXOSC9-203ENST00000503139 FKBP9O95302 570 aa11.15□□□□□ -0.62
EXOSC9-203ENST00000503139 COL6A2P12110 1019 aa11.15□□□□□ -0.62
EXOSC9-203ENST00000503139 LSSP48449 732 aa11.15□□□□□ -0.62
EXOSC9-203ENST00000503139 ARHGAP44Q17R89 818 aa11.15□□□□□ -0.62
EXOSC9-203ENST00000503139 HHIPL2Q6UWX4 724 aa11.15□□□□□ -0.62
EXOSC9-203ENST00000503139 FKBP9P1Q75LS8 142 aa11.15□□□□□ -0.62
EXOSC9-203ENST00000503139 NLRX1Q86UT6 975 aa11.15□□□□□ -0.62
EXOSC9-203ENST00000503139 SPATS2Q86XZ4 545 aaKnown RBP11.15□□□□□ -0.62
EXOSC9-203ENST00000503139 PIP4K2CQ8TBX8 421 aa11.15□□□□□ -0.62
EXOSC9-203ENST00000503139 SHISA4Q96DD7 197 aa11.15□□□□□ -0.62
EXOSC9-203ENST00000503139 A0A1W2PQ27 194 aa11.14□□□□□ -0.63
EXOSC9-203ENST00000503139 A0A1W2PQ64 194 aa11.14□□□□□ -0.63
EXOSC9-203ENST00000503139 A0A1W2PQC6 194 aa11.14□□□□□ -0.63
EXOSC9-203ENST00000503139 A0A1W2PQD8 194 aa11.14□□□□□ -0.63
EXOSC9-203ENST00000503139 PSPNO60542 156 aa11.14□□□□□ -0.63
EXOSC9-203ENST00000503139 RNASE1P07998 156 aaKnown RBP11.14□□□□□ -0.63
EXOSC9-203ENST00000503139 IL2P60568 153 aa11.14□□□□□ -0.63
EXOSC9-203ENST00000503139 SART3Q15020 963 aaKnown RBP11.14□□□□□ -0.63
EXOSC9-203ENST00000503139 PLCL1Q15111 1095 aa11.14□□□□□ -0.63
EXOSC9-203ENST00000503139 AGBL5Q8NDL9 886 aa11.14□□□□□ -0.63
EXOSC9-203ENST00000503139 SH3RF2Q8TEC5 729 aa11.14□□□□□ -0.63
EXOSC9-203ENST00000503139 CHTF18Q8WVB6 975 aa11.14□□□□□ -0.63
EXOSC9-203ENST00000503139 SLC6A20Q9NP91 592 aa11.14□□□□□ -0.63
EXOSC9-203ENST00000503139 THG1LQ9NWX6 298 aaKnown RBP11.14□□□□□ -0.63
EXOSC9-203ENST00000503139 NTRK1P04629 796 aa11.13□□□□□ -0.63
EXOSC9-203ENST00000503139 GLI4P10075 376 aa11.13□□□□□ -0.63
EXOSC9-203ENST00000503139 TMPRSS15P98073 1019 aa11.13□□□□□ -0.63
EXOSC9-203ENST00000503139 FSTL4Q6MZW2 842 aa11.13□□□□□ -0.63
EXOSC9-203ENST00000503139 ARHGAP36Q6ZRI8 547 aa11.13□□□□□ -0.63
EXOSC9-203ENST00000503139 USP33Q8TEY7 942 aa11.13□□□□□ -0.63
EXOSC9-203ENST00000503139 GPR101Q96P66 508 aaPredicted RBP11.13□□□□□ -0.63
EXOSC9-203ENST00000503139 C19orf44Q9H6X5 657 aa11.13□□□□□ -0.63
EXOSC9-203ENST00000503139 SLC5A4Q9NY91 659 aa11.13□□□□□ -0.63
EXOSC9-203ENST00000503139 MAN2B1O00754 1011 aa11.12□□□□□ -0.63
EXOSC9-203ENST00000503139 KATNA1O75449 491 aa11.12□□□□□ -0.63
EXOSC9-203ENST00000503139 WNT11O96014 354 aa11.12□□□□□ -0.63
EXOSC9-203ENST00000503139 S100BP04271 92 aaPredicted RBP11.12□□□□□ -0.63
EXOSC9-203ENST00000503139 ZBTB48P10074 688 aaPredicted RBP11.12□□□□□ -0.63
EXOSC9-203ENST00000503139 KRT15P19012 456 aa11.12□□□□□ -0.63
EXOSC9-203ENST00000503139 EMC4Q5J8M3 183 aa11.12□□□□□ -0.63
EXOSC9-203ENST00000503139 PTRH1Q86Y79 214 aaKnown RBP11.12□□□□□ -0.63
EXOSC9-203ENST00000503139 NOSTRINQ8IVI9 506 aa11.12□□□□□ -0.63
EXOSC9-203ENST00000503139 LILRA2Q8N149 483 aa11.12□□□□□ -0.63
EXOSC9-203ENST00000503139 UHMK1Q8TAS1 419 aaKnown RBP11.12□□□□□ -0.63
EXOSC9-203ENST00000503139 BOCQ9BWV1 1114 aa11.12□□□□□ -0.63
EXOSC9-203ENST00000503139 EMC7Q9NPA0 242 aa11.12□□□□□ -0.63
EXOSC9-203ENST00000503139 SPTLC3Q9NUV7 552 aa11.12□□□□□ -0.63
EXOSC9-203ENST00000503139 CTNND2Q9UQB3 1225 aa11.12□□□□□ -0.63
EXOSC9-203ENST00000503139 ABCC9O60706 1549 aa11.11□□□□□ -0.63
EXOSC9-203ENST00000503139 SLC12A8A0AV02 714 aa11.11□□□□□ -0.63
EXOSC9-203ENST00000503139 TRHRP34981 398 aaPredicted RBP11.11□□□□□ -0.63
EXOSC9-203ENST00000503139 SLC6A11P48066 632 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms