RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 AEBP2Q6ZN18 517 aaPredicted RBP36.09■■■■□ 3.37
EXOSC9-203ENST00000503139 CHIC1Q5VXU3 224 aa35.93■■■■□ 3.34
EXOSC9-203ENST00000503139 PHF23Q9BUL5 403 aaPredicted RBP31.72■■■□□ 2.67
EXOSC9-203ENST00000503139 SENP3Q9H4L4 574 aaPredicted RBP30.43■■■□□ 2.46
EXOSC9-203ENST00000503139 PLPPR3Q6T4P5 718 aa29.46■■■□□ 2.31
EXOSC9-203ENST00000503139 FOXD1Q16676 465 aa28.19■■■□□ 2.1
EXOSC9-203ENST00000503139 PPP6R1Q9UPN7 881 aa27.73■■■□□ 2.03
EXOSC9-203ENST00000503139 ADRA2BP18089 450 aa27.7■■■□□ 2.02
EXOSC9-203ENST00000503139 PIAS4Q8N2W9 510 aaPredicted RBP26.71■■□□□ 1.87
EXOSC9-203ENST00000503139 KCNA4P22459 653 aa26.32■■□□□ 1.8
EXOSC9-203ENST00000503139 PPP4R3CPQ6ZMV5 832 aa26.06■■□□□ 1.76
EXOSC9-203ENST00000503139 MSH5O43196 834 aa25.66■■□□□ 1.7
EXOSC9-203ENST00000503139 NCBP3Q53F19 620 aaKnown RBP25.54■■□□□ 1.68
EXOSC9-203ENST00000503139 EHMT2Q96KQ7 1210 aa25.28■■□□□ 1.64
EXOSC9-203ENST00000503139 SCAF1Q9H7N4 1312 aaKnown RBP25.27■■□□□ 1.64
EXOSC9-203ENST00000503139 NPM3O75607 178 aaKnown RBP25.25■■□□□ 1.63
EXOSC9-203ENST00000503139 CNKSR2Q8WXI2 1034 aa25.16■■□□□ 1.62
EXOSC9-203ENST00000503139 SLC4A1APQ9BWU0 796 aaKnown RBP25.16■■□□□ 1.62
EXOSC9-203ENST00000503139 MAPK8IP2Q13387 824 aaPredicted RBP24.93■■□□□ 1.58
EXOSC9-203ENST00000503139 CSRNP3Q8WYN3 585 aa24.71■■□□□ 1.55
EXOSC9-203ENST00000503139 RNF216Q9NWF9 866 aaPredicted RBP24.51■■□□□ 1.51
EXOSC9-203ENST00000503139 DNAJC5BQ9UF47 199 aa24.48■■□□□ 1.51
EXOSC9-203ENST00000503139 DMRT2Q9Y5R5 561 aa24.44■■□□□ 1.5
EXOSC9-203ENST00000503139 ZBTB22O15209 634 aa24.3■■□□□ 1.48
EXOSC9-203ENST00000503139 HOXD11P31277 338 aaPredicted RBP24.25■■□□□ 1.47
EXOSC9-203ENST00000503139 FOXD4L1Q9NU39 408 aa24■■□□□ 1.43
EXOSC9-203ENST00000503139 SLC4A2P04920 1241 aa23.69■■□□□ 1.38
EXOSC9-203ENST00000503139 POTEDQ86YR6 584 aa23.47■■□□□ 1.35
EXOSC9-203ENST00000503139 MYCNP04198 464 aaPredicted RBP23.28■■□□□ 1.32
EXOSC9-203ENST00000503139 DCAF8L1A6NGE4 600 aa23.22■■□□□ 1.31
EXOSC9-203ENST00000503139 ATXN8OSP0DMR3 200 aa23.1■■□□□ 1.29
EXOSC9-203ENST00000503139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.01■■□□□ 1.276e-12■■■□□ 15.6
EXOSC9-203ENST00000503139 U3KPZ7 1027 aaPredicted RBP22.81■■□□□ 1.24
EXOSC9-203ENST00000503139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.69■■□□□ 1.22
EXOSC9-203ENST00000503139 HNRNPUL2Q1KMD3 747 aaKnown RBP22.69■■□□□ 1.22
EXOSC9-203ENST00000503139 SAMD1Q6SPF0 538 aaPredicted RBP22.67■■□□□ 1.22
EXOSC9-203ENST00000503139 ATF5Q9Y2D1 282 aaPredicted RBP22.66■■□□□ 1.22
EXOSC9-203ENST00000503139 APLP2Q06481 763 aa22.24■■□□□ 1.15
EXOSC9-203ENST00000503139 FKBP8Q14318 412 aa22.24■■□□□ 1.15
EXOSC9-203ENST00000503139 ZNF219Q9P2Y4 722 aaPredicted RBP22.17■■□□□ 1.14
EXOSC9-203ENST00000503139 RNF39Q9H2S5 420 aa22.1■■□□□ 1.13
EXOSC9-203ENST00000503139 SPINK5Q9NQ38 1064 aaPredicted RBP21.93■■□□□ 1.1
EXOSC9-203ENST00000503139 C1QBPQ07021 282 aaKnown RBP21.85■■□□□ 1.09
EXOSC9-203ENST00000503139 TRHP20396 242 aaPredicted RBP21.82■■□□□ 1.08
EXOSC9-203ENST00000503139 CAPN15O75808 1086 aa21.74■■□□□ 1.07
EXOSC9-203ENST00000503139 MKRN4PQ13434 485 aaPredicted RBP21.72■■□□□ 1.07
EXOSC9-203ENST00000503139 POLA2Q14181 598 aa21.66■■□□□ 1.06
EXOSC9-203ENST00000503139 RTN4Q9NQC3 1192 aaKnown RBP21.57■■□□□ 1.04
EXOSC9-203ENST00000503139 AMER1Q5JTC6 1135 aaPredicted RBP21.56■■□□□ 1.04
EXOSC9-203ENST00000503139 FBLN2P98095 1184 aa21.55■■□□□ 1.04
EXOSC9-203ENST00000503139 SPDYE4A6NLX3 237 aa21.52■■□□□ 1.04
EXOSC9-203ENST00000503139 ABCB7O75027 752 aa21.42■■□□□ 1.02
EXOSC9-203ENST00000503139 PROM2Q8N271 834 aa21.38■■□□□ 1.01
EXOSC9-203ENST00000503139 ZBTB12Q9Y330 459 aaPredicted RBP21.34■■□□□ 1.01
EXOSC9-203ENST00000503139 DSG3P32926 999 aa21.28■■□□□ 1
EXOSC9-203ENST00000503139 FBXO3Q9UK99 471 aa21.22■□□□□ 0.99
EXOSC9-203ENST00000503139 VASPP50552 380 aaPredicted RBP20.96■□□□□ 0.95
EXOSC9-203ENST00000503139 OSCARQ8IYS5 282 aa20.93■□□□□ 0.94
EXOSC9-203ENST00000503139 CACNB1Q02641 598 aaPredicted RBP20.91■□□□□ 0.94
EXOSC9-203ENST00000503139 SPDYE2BA6NHP3 402 aa20.86■□□□□ 0.93
EXOSC9-203ENST00000503139 SPDYE6P0CI01 402 aa20.86■□□□□ 0.93
EXOSC9-203ENST00000503139 SPDYE2Q495Y8 402 aa20.86■□□□□ 0.93
EXOSC9-203ENST00000503139 ZNF692Q9BU19 519 aaPredicted RBP20.86■□□□□ 0.93
EXOSC9-203ENST00000503139 SSUH2Q9Y2M2 353 aa20.83■□□□□ 0.93
EXOSC9-203ENST00000503139 IFNLR1Q8IU57 520 aaPredicted RBP20.76■□□□□ 0.91
EXOSC9-203ENST00000503139 SLC24A1O60721 1099 aa20.66■□□□□ 0.9
EXOSC9-203ENST00000503139 PABPN1Q86U42 306 aaKnown RBP eCLIP20.63■□□□□ 0.89
EXOSC9-203ENST00000503139 STAG3Q9UJ98 1225 aa20.56■□□□□ 0.88
EXOSC9-203ENST00000503139 PKD2Q13563 968 aa20.37■□□□□ 0.85
EXOSC9-203ENST00000503139 KLHL34Q8N239 644 aa20.34■□□□□ 0.85
EXOSC9-203ENST00000503139 PLCD3Q8N3E9 789 aa20.33■□□□□ 0.85
EXOSC9-203ENST00000503139 SPOCK2Q92563 424 aa20.33■□□□□ 0.85
EXOSC9-203ENST00000503139 MIER1Q8N108 512 aa20.27■□□□□ 0.84
EXOSC9-203ENST00000503139 RBM42Q9BTD8 480 aaKnown RBP20.19■□□□□ 0.82
EXOSC9-203ENST00000503139 AKT1S1Q96B36 256 aa20.14■□□□□ 0.81
EXOSC9-203ENST00000503139 PLEKHG5O94827 1062 aa20.07■□□□□ 0.8
EXOSC9-203ENST00000503139 ZBTB47Q9UFB7 747 aaPredicted RBP20.06■□□□□ 0.8
EXOSC9-203ENST00000503139 DCAF8L2P0C7V8 631 aa20.04■□□□□ 0.8
EXOSC9-203ENST00000503139 SPDYE1Q8NFV5 336 aaPredicted RBP20.04■□□□□ 0.8
EXOSC9-203ENST00000503139 ECM2O94769 699 aaPredicted RBP20.02■□□□□ 0.8
EXOSC9-203ENST00000503139 PLCB2Q00722 1185 aa19.95■□□□□ 0.78
EXOSC9-203ENST00000503139 REM2Q8IYK8 340 aaPredicted RBP19.95■□□□□ 0.78
EXOSC9-203ENST00000503139 CLEC11AQ9Y240 323 aa19.88■□□□□ 0.77
EXOSC9-203ENST00000503139 RGL2O15211 777 aa19.86■□□□□ 0.77
EXOSC9-203ENST00000503139 CIZ1Q9ULV3 898 aaPredicted RBP19.85■□□□□ 0.77
EXOSC9-203ENST00000503139 PRR29P0C7W0 189 aa19.82■□□□□ 0.76
EXOSC9-203ENST00000503139 CREBZFQ9NS37 354 aa19.82■□□□□ 0.76
EXOSC9-203ENST00000503139 NUBP1P53384 320 aa19.78■□□□□ 0.76
EXOSC9-203ENST00000503139 NPM1P06748 294 aaKnown RBP eCLIP19.75■□□□□ 0.75
EXOSC9-203ENST00000503139 MNX1P50219 401 aaPredicted RBP19.75■□□□□ 0.75
EXOSC9-203ENST00000503139 TRIM41Q8WV44 630 aa19.74■□□□□ 0.75
EXOSC9-203ENST00000503139 PITPNM1O00562 1244 aa19.73■□□□□ 0.75
EXOSC9-203ENST00000503139 GSE1Q14687 1217 aa19.69■□□□□ 0.74
EXOSC9-203ENST00000503139 BBXQ8WY36 941 aaPredicted RBP19.69■□□□□ 0.74
EXOSC9-203ENST00000503139 HAP1P54257 671 aaPredicted RBP19.6■□□□□ 0.73
EXOSC9-203ENST00000503139 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.58■□□□□ 0.72
EXOSC9-203ENST00000503139 DCAF8Q5TAQ9 597 aa19.56■□□□□ 0.72
EXOSC9-203ENST00000503139 RNF25Q96BH1 459 aaPredicted RBP19.56■□□□□ 0.72
EXOSC9-203ENST00000503139 FAM212AQ96EL1 285 aa19.53■□□□□ 0.72
EXOSC9-203ENST00000503139 RASEFQ8IZ41 740 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms