RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 ITPKAP23677 461 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 TARSP26639 723 aaKnown RBP4.45□□□□□ -1.7
CLTC-209ENST00000498711 ME1P48163 572 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 TPM4P67936 248 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 CCT2P78371 535 aaKnown RBP4.45□□□□□ -1.7
CLTC-209ENST00000498711 MYL5Q02045 173 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 AIMP1Q12904 312 aaKnown RBP4.45□□□□□ -1.7
CLTC-209ENST00000498711 SLC39A6Q13433 755 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 MORC3Q14149 939 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 NR1I3Q14994 352 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 DDR2Q16832 855 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 ERCC6LQ2NKX8 1250 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 SYT10Q6XYQ8 523 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 KRBA2Q6ZNG9 492 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 TMC6Q7Z403 805 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 TRIM42Q8IWZ5 723 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 GPR161Q8N6U8 529 aaKnown RBP4.45□□□□□ -1.7
CLTC-209ENST00000498711 MARCH10Q8NA82 808 aaPredicted RBP4.45□□□□□ -1.7
CLTC-209ENST00000498711 NCOA7Q8NI08 942 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 C8orf76Q96K31 380 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 CNTNAP3BQ96NU0 1288 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 MED15Q96RN5 788 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 LRRC3Q9BY71 257 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 LRRC2Q9BYS8 371 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 CNTNAP3Q9BZ76 1288 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 FANCLQ9NW38 375 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 RIC1Q4ADV7 1423 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 TCRBV5S4A2TA0A5A2 114 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 ERVV-2B6SEH9 535 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 GOLIM4O00461 696 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 ZSCAN12O43309 604 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 PRC1O43663 620 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 IFIT1P09914 478 aaKnown RBP4.45□□□□□ -1.7
CLTC-209ENST00000498711 SFPQP23246 707 aaKnown RBP eCLIP4.45□□□□□ -1.7
CLTC-209ENST00000498711 SOX18P35713 384 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 LIFRP42702 1097 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 EIF6P56537 245 aaKnown RBP4.45□□□□□ -1.7
CLTC-209ENST00000498711 IFRD2Q12894 506 aaPredicted RBP4.45□□□□□ -1.7
CLTC-209ENST00000498711 STK38Q15208 465 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 UBE3CQ15386 1083 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 CHRNA2Q15822 529 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 SEZ6Q53EL9 994 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 TTLL5Q6EMB2 1281 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 C10orf71Q711Q0 1435 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 UBE3BQ7Z3V4 1068 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 VGLL2Q8N8G2 317 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 TC2NQ8N9U0 490 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 MSANTD4Q8NCY6 345 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 TRPM4Q8TD43 1214 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 RABGGTAQ92696 567 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 HPS1Q92902 700 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 TMEM87BQ96K49 555 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 NECAB3Q96P71 396 aaPredicted RBP4.45□□□□□ -1.7
CLTC-209ENST00000498711 CWC25Q9NXE8 425 aaPredicted RBP4.45□□□□□ -1.7
CLTC-209ENST00000498711 TRMT1Q9NXH9 659 aaKnown RBP4.45□□□□□ -1.7
CLTC-209ENST00000498711 STK32BQ9NY57 414 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 CALCOCO1Q9P1Z2 691 aa4.45□□□□□ -1.7
CLTC-209ENST00000498711 BRCA1P38398 1863 aaKnown RBP4.44□□□□□ -1.7
CLTC-209ENST00000498711 A0A087WWV3 80 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 A0A1B0GUL7 405 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 GDF9O60383 454 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 ADD2P35612 726 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 GRIA4P48058 902 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 PDE4BQ07343 736 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 IMMTQ16891 758 aaKnown RBP4.44□□□□□ -1.7
CLTC-209ENST00000498711 LRRC24Q50LG9 513 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 ARSHQ5FYA8 562 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 JAKMIP3Q5VZ66 844 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 CC2D1AQ6P1N0 951 aaPredicted RBP4.44□□□□□ -1.7
CLTC-209ENST00000498711 HOMER1Q86YM7 354 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 STK11IPQ8N1F8 1099 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 CELF2-AS1Q8N7Q2 184 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 PNMA5Q96PV4 448 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 PANX2Q96RD6 677 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 DNAJC7Q99615 494 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 SDF4Q9BRK5 362 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 FUT8Q9BYC5 575 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 STRN4Q9NRL3 753 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 DZANK1Q9NVP4 752 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 ACTR10Q9NZ32 417 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 PPP2R2CQ9Y2T4 447 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 RIPOR2Q9Y4F9 1068 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 V9GYY5 206 aaPredicted RBP4.44□□□□□ -1.7
CLTC-209ENST00000498711 ITIH6Q6UXX5 1313 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 LRRC10BA6NIK2 292 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 CAPN5O15484 640 aaPredicted RBP4.44□□□□□ -1.7
CLTC-209ENST00000498711 PCCAP05165 728 aaPredicted RBP4.44□□□□□ -1.7
CLTC-209ENST00000498711 PSAPP07602 524 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 ATP1A3P13637 1013 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 LMNB1P20700 586 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 SYKP43405 635 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 GIPRP48546 466 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 TOB1P50616 345 aaPredicted RBP4.44□□□□□ -1.7
CLTC-209ENST00000498711 UBASH3AP57075 661 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 TIMM10P62072 90 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 HYAL2Q12891 473 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 BRD3Q15059 726 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 TAF7LQ5H9L4 462 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 C6orf118Q5T5N4 469 aa4.44□□□□□ -1.7
CLTC-209ENST00000498711 KRT40Q6A162 431 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms