RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 CALCRLQ16602 461 aa15.38■□□□□ 0.05
CPNE1-227ENST00000498056 PRAMEF19Q5SWL8 479 aa15.38■□□□□ 0.05
CPNE1-227ENST00000498056 PPP4R3AQ6IN85 833 aa15.38■□□□□ 0.05
CPNE1-227ENST00000498056 CHAMP1Q96JM3 812 aa15.38■□□□□ 0.05
CPNE1-227ENST00000498056 CDHR1Q96JP9 859 aa15.38■□□□□ 0.05
CPNE1-227ENST00000498056 USP28Q96RU2 1077 aa15.38■□□□□ 0.05
CPNE1-227ENST00000498056 KATNBL1Q9H079 304 aa15.38■□□□□ 0.05
CPNE1-227ENST00000498056 JADE2Q9NQC1 790 aa15.38■□□□□ 0.05
CPNE1-227ENST00000498056 EDIL3O43854 480 aa15.37■□□□□ 0.05
CPNE1-227ENST00000498056 SORBS3O60504 671 aa15.37■□□□□ 0.05
CPNE1-227ENST00000498056 OR52Z1P0C646 297 aa15.37■□□□□ 0.05
CPNE1-227ENST00000498056 ARP10275 920 aa15.37■□□□□ 0.05
CPNE1-227ENST00000498056 CNGA1P29973 690 aa15.37■□□□□ 0.05
CPNE1-227ENST00000498056 ADCYAP1R1P41586 468 aa15.37■□□□□ 0.05
CPNE1-227ENST00000498056 KRT85P78386 507 aa15.37■□□□□ 0.05
CPNE1-227ENST00000498056 SEMA3FQ13275 785 aa15.37■□□□□ 0.05
CPNE1-227ENST00000498056 ORC2Q13416 577 aaPredicted RBP15.37■□□□□ 0.05
CPNE1-227ENST00000498056 SF3A1Q15459 793 aaKnown RBP15.37■□□□□ 0.05
CPNE1-227ENST00000498056 Q4G0T1 1027 aa15.37■□□□□ 0.05
CPNE1-227ENST00000498056 ANO1Q5XXA6 986 aa15.37■□□□□ 0.05
CPNE1-227ENST00000498056 FBXO46Q6PJ61 603 aaPredicted RBP15.37■□□□□ 0.05
CPNE1-227ENST00000498056 NIPA1Q7RTP0 329 aa15.37■□□□□ 0.05
CPNE1-227ENST00000498056 SCFD2Q8WU76 684 aa15.37■□□□□ 0.05
CPNE1-227ENST00000498056 LENG9Q96B70 501 aa15.37■□□□□ 0.05
CPNE1-227ENST00000498056 PDGFCQ9NRA1 345 aa15.37■□□□□ 0.05
CPNE1-227ENST00000498056 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.37■□□□□ 0.05
CPNE1-227ENST00000498056 KCNH7Q9NS40 1196 aa15.37■□□□□ 0.05
CPNE1-227ENST00000498056 CEP131Q9UPN4 1083 aa15.37■□□□□ 0.05
CPNE1-227ENST00000498056 CLIC4Q9Y696 253 aa15.37■□□□□ 0.05
CPNE1-227ENST00000498056 CYP3A7-CYP3A51PA0A087WV96 503 aa15.36■□□□□ 0.05
CPNE1-227ENST00000498056 DDX39AO00148 427 aaKnown RBP15.36■□□□□ 0.05
CPNE1-227ENST00000498056 MEIS1O00470 390 aa15.36■□□□□ 0.05
CPNE1-227ENST00000498056 ARIH2O95376 493 aa15.36■□□□□ 0.05
CPNE1-227ENST00000498056 ZNF865P0CJ78 1059 aaPredicted RBP15.36■□□□□ 0.05
CPNE1-227ENST00000498056 TXNP10599 105 aaKnown RBP15.36■□□□□ 0.05
CPNE1-227ENST00000498056 UBA1P22314 1058 aaKnown RBP15.36■□□□□ 0.05
CPNE1-227ENST00000498056 CYP3A7P24462 503 aa15.36■□□□□ 0.05
CPNE1-227ENST00000498056 CACNB2Q08289 660 aaPredicted RBP15.36■□□□□ 0.05
CPNE1-227ENST00000498056 TTLL4Q14679 1199 aa15.36■□□□□ 0.05
CPNE1-227ENST00000498056 STK38Q15208 465 aa15.36■□□□□ 0.05
CPNE1-227ENST00000498056 CCDC144BQ3MJ40 725 aa15.36■□□□□ 0.05
CPNE1-227ENST00000498056 TRPV1Q8NER1 839 aa15.36■□□□□ 0.05
CPNE1-227ENST00000498056 GJA10Q969M2 543 aa15.36■□□□□ 0.05
CPNE1-227ENST00000498056 LENG1Q96BZ8 264 aaPredicted RBP15.36■□□□□ 0.05
CPNE1-227ENST00000498056 MBOAT7Q96N66 472 aa15.36■□□□□ 0.05
CPNE1-227ENST00000498056 ZNF577Q9BSK1 485 aa15.36■□□□□ 0.05
CPNE1-227ENST00000498056 TMEM60Q9H2L4 133 aa15.36■□□□□ 0.05
CPNE1-227ENST00000498056 AGO4Q9HCK5 861 aaKnown RBP15.36■□□□□ 0.05
CPNE1-227ENST00000498056 PRDM10Q9NQV6 1147 aa15.36■□□□□ 0.05
CPNE1-227ENST00000498056 TCEAL9Q9UHQ7 104 aa15.36■□□□□ 0.05
CPNE1-227ENST00000498056 KAT6AQ92794 2004 aa15.35■□□□□ 0.05
CPNE1-227ENST00000498056 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.35■□□□□ 0.05
CPNE1-227ENST00000498056 MSH4O15457 936 aa15.35■□□□□ 0.05
CPNE1-227ENST00000498056 BMP15O95972 392 aa15.35■□□□□ 0.05
CPNE1-227ENST00000498056 MYCP01106 439 aaPredicted RBP15.35■□□□□ 0.05
CPNE1-227ENST00000498056 IGHA2P01877 340 aa15.35■□□□□ 0.05
CPNE1-227ENST00000498056 AKR1A1P14550 325 aa15.35■□□□□ 0.05
CPNE1-227ENST00000498056 CCND3P30281 292 aaPredicted RBP15.35■□□□□ 0.05
CPNE1-227ENST00000498056 SP4Q02446 784 aa15.35■□□□□ 0.05
CPNE1-227ENST00000498056 PTGDRQ13258 359 aa15.35■□□□□ 0.05
CPNE1-227ENST00000498056 LY6KQ17RY6 165 aa15.35■□□□□ 0.05
CPNE1-227ENST00000498056 GJC2Q5T442 439 aaPredicted RBP15.35■□□□□ 0.05
CPNE1-227ENST00000498056 LRCH2Q5VUJ6 765 aa15.35■□□□□ 0.05
CPNE1-227ENST00000498056 TAPT1Q6NXT6 567 aa15.35■□□□□ 0.05
CPNE1-227ENST00000498056 ETNPPLQ8TBG4 499 aa15.35■□□□□ 0.05
CPNE1-227ENST00000498056 TNPO1Q92973 898 aaKnown RBP15.35■□□□□ 0.05
CPNE1-227ENST00000498056 POLR3EQ9NVU0 708 aa15.35■□□□□ 0.05
CPNE1-227ENST00000498056 TFIP11Q9UBB9 837 aaKnown RBP15.35■□□□□ 0.05
CPNE1-227ENST00000498056 NRBP1Q9UHY1 535 aa15.35■□□□□ 0.05
CPNE1-227ENST00000498056 IPO5O00410 1097 aaKnown RBP15.34■□□□□ 0.05
CPNE1-227ENST00000498056 GAS7O60861 476 aa15.34■□□□□ 0.05
CPNE1-227ENST00000498056 GGPS1O95749 300 aa15.34■□□□□ 0.05
CPNE1-227ENST00000498056 PTGS1P23219 599 aa15.34■□□□□ 0.05
CPNE1-227ENST00000498056 ICAM3P32942 547 aa15.34■□□□□ 0.05
CPNE1-227ENST00000498056 ATP2C1P98194 919 aaPredicted RBP15.34■□□□□ 0.05
CPNE1-227ENST00000498056 PKN2Q16513 984 aaKnown RBP15.34■□□□□ 0.05
CPNE1-227ENST00000498056 KCNV1Q6PIU1 500 aa15.34■□□□□ 0.05
CPNE1-227ENST00000498056 SLFN12Q8IYM2 578 aa15.34■□□□□ 0.05
CPNE1-227ENST00000498056 COPS5Q92905 334 aa15.34■□□□□ 0.05
CPNE1-227ENST00000498056 SDF4Q9BRK5 362 aa15.34■□□□□ 0.05
CPNE1-227ENST00000498056 KCNMB3Q9NPA1 279 aa15.34■□□□□ 0.05
CPNE1-227ENST00000498056 SPATA31C2B4DYI2 1134 aa15.33■□□□□ 0.04
CPNE1-227ENST00000498056 LAD1O00515 517 aa15.33■□□□□ 0.04
CPNE1-227ENST00000498056 TBX3O15119 743 aa15.33■□□□□ 0.04
CPNE1-227ENST00000498056 ADCY6O43306 1168 aa15.33■□□□□ 0.04
CPNE1-227ENST00000498056 CHMP2AO43633 222 aa15.33■□□□□ 0.04
CPNE1-227ENST00000498056 BAG4O95429 457 aaKnown RBP15.33■□□□□ 0.04
CPNE1-227ENST00000498056 YEATS4O95619 227 aa15.33■□□□□ 0.04
CPNE1-227ENST00000498056 KCNA2P16389 499 aa15.33■□□□□ 0.04
CPNE1-227ENST00000498056 TXKP42681 527 aa15.33■□□□□ 0.04
CPNE1-227ENST00000498056 NASPP49321 788 aaPredicted RBP15.33■□□□□ 0.04
CPNE1-227ENST00000498056 TNFAIP2Q03169 654 aa15.33■□□□□ 0.04
CPNE1-227ENST00000498056 ITGB3BPQ13352 177 aaPredicted RBP15.33■□□□□ 0.04
CPNE1-227ENST00000498056 TMEM266Q2M3C6 531 aa15.33■□□□□ 0.04
CPNE1-227ENST00000498056 TMEM63BQ5T3F8 832 aa15.33■□□□□ 0.04
CPNE1-227ENST00000498056 MAP3K21Q5TCX8 1036 aa15.33■□□□□ 0.04
CPNE1-227ENST00000498056 TLK2Q86UE8 772 aa15.33■□□□□ 0.04
CPNE1-227ENST00000498056 OR6J1Q8NGC5 347 aa15.33■□□□□ 0.04
CPNE1-227ENST00000498056 TEKT3Q9BXF9 490 aa15.33■□□□□ 0.04
CPNE1-227ENST00000498056 GDPD2Q9HCC8 539 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms