RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 A0A1B0GTH6 734 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 GLTPD2A6NH11 291 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 TRAF5O00463 557 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 FOSP01100 380 aaPredicted RBP8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 CALRP27797 417 aaKnown RBP8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 CASP14P31944 242 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 C1QTNF8P60827 252 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 MDM2Q00987 491 aaPredicted RBP8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 E4F1Q66K89 784 aaPredicted RBP8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 CCDC42Q96M95 316 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 AMNQ9BXJ7 453 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 THAP9Q9H5L6 903 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 SUGCTQ9HAC7 445 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 GDAQ9Y2T3 454 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 TOGARAM1Q9Y4F4 1720 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 GSTTP1A0A1W2PQM5 241 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 KBTBD13C9JR72 458 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 POLRMTO00411 1230 aaKnown RBP8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 ZEB2O60315 1214 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 TAF3Q5VWG9 929 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 KCTD1Q719H9 257 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 DPH6Q7L8W6 267 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 SYCP3Q8IZU3 236 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 GOLGA1Q92805 767 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 CARD6Q9BX69 1037 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 DOT1LQ8TEK3 1739 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 COL22A1Q8NFW1 1626 aaPredicted RBP8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 ZBTB5O15062 677 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 PDHBP11177 359 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 ELF2Q15723 593 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 TCP11X2Q5H9J9 407 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 FBXO11Q86XK2 927 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 SLFN12Q8IYM2 578 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 DESI2Q9BSY9 194 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 MCM3P25205 808 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 SLC16A2P36021 539 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 PRCPP42785 496 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 PPP2R3AQ06190 1150 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 ZNF543Q08ER8 600 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 KIF5AQ12840 1032 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 TCERG1LQ5VWI1 586 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 PARK7Q99497 189 aaKnown RBP8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 CTAGE15A4D2H0 777 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 C6orf222P0C671 652 aaPredicted RBP8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 CTAGE8P0CG41 777 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 NR1I3Q14994 352 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 TMEM179Q6ZVK1 233 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 MAEAQ7L5Y9 396 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 CTAGE6Q86UF2 777 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 HOOK3Q86VS8 718 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 LDHDQ86WU2 507 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 CTAGE4Q8IX94 777 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 KRT222Q8N1A0 295 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 NEK11Q8NG66 645 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 DCAF4Q8WV16 495 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 FAM193BQ96PV7 902 aaPredicted RBP8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 TMEM39BQ9GZU3 492 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 GUCA1BQ9UMX6 200 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 SDK1Q7Z5N4 2213 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 GAKO14976 1311 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 NUP98P52948 1817 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 USP17L10C9JJH3 530 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 ZBTB24O43167 697 aaPredicted RBP8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 USP8P40818 1118 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 DDR1Q08345 913 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 GRIK5Q16478 980 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 STRIP1Q5VSL9 837 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 NYAP1Q6ZVC0 841 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 TUBGCP2Q9BSJ2 902 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 TMEM60Q9H2L4 133 aa8.84□□□□□ -0.99
HLA-DMB-262ENST00000498020 PP2D1A8MPX8 630 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 MFAP3LO75121 409 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 COBLO75128 1261 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 CETPP11597 493 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 GNPTABQ3T906 1256 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 HERC4Q5GLZ8 1057 aaPredicted RBP8.83□□□□□ -1
HLA-DMB-262ENST00000498020 GPC2Q8N158 579 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 ANKRD13CQ8N6S4 541 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 ALS2CR12Q96Q35 445 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 SLC39A2Q9NP94 309 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 OGFRQ9NZT2 677 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 TEX33O43247 280 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 MYL3P08590 195 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 SEPT2Q15019 361 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 NBPF9Q3BBW0 867 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 CDC42EP5Q6NZY7 148 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 CCDC91Q7Z6B0 441 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 SH3RF1Q7Z6J0 888 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 NLRX1Q86UT6 975 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 MYOCDQ8IZQ8 938 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 ZKSCAN4Q969J2 545 aaPredicted RBP8.83□□□□□ -1
HLA-DMB-262ENST00000498020 NAPGQ99747 312 aaPredicted RBP8.83□□□□□ -1
HLA-DMB-262ENST00000498020 SLF1Q9BQI6 1058 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 ZSWIM4Q9H7M6 989 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 ADD3Q9UEY8 706 aaKnown RBP8.83□□□□□ -1
HLA-DMB-262ENST00000498020 LIMA1Q9UHB6 759 aaKnown RBP8.83□□□□□ -1
HLA-DMB-262ENST00000498020 DNM3Q9UQ16 869 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 ITGB4P16144 1822 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 PVALEFA0A1B0GWK0 134 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 MACROD2A1Z1Q3 448 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms