RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 CCND2P30279 289 aa19.53■□□□□ 0.72
TRAPPC3-207ENST00000497251 GNPTABQ3T906 1256 aa19.53■□□□□ 0.72
TRAPPC3-207ENST00000497251 MICALL1Q8N3F8 863 aa19.53■□□□□ 0.72
TRAPPC3-207ENST00000497251 STAG2Q8N3U4 1231 aa19.53■□□□□ 0.72
TRAPPC3-207ENST00000497251 ARNTL2Q8WYA1 636 aa19.53■□□□□ 0.72
TRAPPC3-207ENST00000497251 DHX38Q92620 1227 aaKnown RBP19.53■□□□□ 0.72
TRAPPC3-207ENST00000497251 SPATA33Q96N06 139 aa19.53■□□□□ 0.72
TRAPPC3-207ENST00000497251 PNMA6FA0A0J9YX94 578 aa19.52■□□□□ 0.72
TRAPPC3-207ENST00000497251 CAND2O75155 1236 aa19.52■□□□□ 0.72
TRAPPC3-207ENST00000497251 GJB5O95377 273 aa19.52■□□□□ 0.72
TRAPPC3-207ENST00000497251 GRM4Q14833 912 aa19.52■□□□□ 0.72
TRAPPC3-207ENST00000497251 GPNMBQ14956 572 aa19.52■□□□□ 0.72
TRAPPC3-207ENST00000497251 PGM5Q15124 567 aa19.52■□□□□ 0.72
TRAPPC3-207ENST00000497251 C1QTNF1Q9BXJ1 281 aa19.52■□□□□ 0.72
TRAPPC3-207ENST00000497251 BRWD1Q9NSI6 2320 aa19.52■□□□□ 0.71
TRAPPC3-207ENST00000497251 NBNO60934 754 aa19.51■□□□□ 0.71
TRAPPC3-207ENST00000497251 RGS20O76081 388 aa19.51■□□□□ 0.71
TRAPPC3-207ENST00000497251 MYCLP12524 364 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC3-207ENST00000497251 SMARCA1P28370 1054 aa19.51■□□□□ 0.71
TRAPPC3-207ENST00000497251 TRIM71Q2Q1W2 868 aaKnown RBP19.51■□□□□ 0.71
TRAPPC3-207ENST00000497251 HLA-CQ95604 372 aa19.51■□□□□ 0.71
TRAPPC3-207ENST00000497251 MAP3K14Q99558 947 aa19.51■□□□□ 0.71
TRAPPC3-207ENST00000497251 ALG1Q9BT22 464 aa19.51■□□□□ 0.71
TRAPPC3-207ENST00000497251 MTA3Q9BTC8 594 aa19.51■□□□□ 0.71
TRAPPC3-207ENST00000497251 USP26Q9BXU7 913 aa19.51■□□□□ 0.71
TRAPPC3-207ENST00000497251 MLXIPQ9HAP2 919 aa19.51■□□□□ 0.71
TRAPPC3-207ENST00000497251 SUPT16HQ9Y5B9 1047 aaKnown RBP19.51■□□□□ 0.71
TRAPPC3-207ENST00000497251 IFIT3O14879 490 aaKnown RBP19.5■□□□□ 0.71
TRAPPC3-207ENST00000497251 LGR5O75473 907 aa19.5■□□□□ 0.71
TRAPPC3-207ENST00000497251 GGPS1O95749 300 aa19.5■□□□□ 0.71
TRAPPC3-207ENST00000497251 GNAT1P11488 350 aa19.5■□□□□ 0.71
TRAPPC3-207ENST00000497251 ICAM3P32942 547 aa19.5■□□□□ 0.71
TRAPPC3-207ENST00000497251 ERVK-21P61565 698 aa19.5■□□□□ 0.71
TRAPPC3-207ENST00000497251 GRB10Q13322 594 aa19.5■□□□□ 0.71
TRAPPC3-207ENST00000497251 NEDD9Q14511 834 aa19.5■□□□□ 0.71
TRAPPC3-207ENST00000497251 XRRA1Q6P2D8 792 aa19.5■□□□□ 0.71
TRAPPC3-207ENST00000497251 RALYLQ86SE5 291 aaKnown RBP19.5■□□□□ 0.71
TRAPPC3-207ENST00000497251 SERINC5Q86VE9 423 aa19.5■□□□□ 0.71
TRAPPC3-207ENST00000497251 NCOA7Q8NI08 942 aa19.5■□□□□ 0.71
TRAPPC3-207ENST00000497251 PPP1R13LQ8WUF5 828 aa19.5■□□□□ 0.71
TRAPPC3-207ENST00000497251 TGS1Q96RS0 853 aaKnown RBP19.5■□□□□ 0.71
TRAPPC3-207ENST00000497251 INSL6Q9Y581 213 aa19.5■□□□□ 0.71
TRAPPC3-207ENST00000497251 PPP1R11O60927 126 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC3-207ENST00000497251 ZNF286BP0CG31 522 aa19.49■□□□□ 0.71
TRAPPC3-207ENST00000497251 HOXC8P31273 242 aa19.49■□□□□ 0.71
TRAPPC3-207ENST00000497251 TROAPQ12815 778 aa19.49■□□□□ 0.71
TRAPPC3-207ENST00000497251 HSDL1Q3SXM5 330 aa19.49■□□□□ 0.71
TRAPPC3-207ENST00000497251 ZNF618Q5T7W0 954 aa19.49■□□□□ 0.71
TRAPPC3-207ENST00000497251 CYB5R4Q7L1T6 521 aa19.49■□□□□ 0.71
TRAPPC3-207ENST00000497251 CATIPQ7Z7H3 387 aa19.49■□□□□ 0.71
TRAPPC3-207ENST00000497251 EXOC6Q8TAG9 804 aa19.49■□□□□ 0.71
TRAPPC3-207ENST00000497251 C16orf70Q9BSU1 422 aa19.49■□□□□ 0.71
TRAPPC3-207ENST00000497251 CERS4Q9HA82 394 aa19.49■□□□□ 0.71
TRAPPC3-207ENST00000497251 MYH7BA7E2Y1 1941 aa19.49■□□□□ 0.71
TRAPPC3-207ENST00000497251 EPOPA6NHQ4 379 aa19.48■□□□□ 0.71
TRAPPC3-207ENST00000497251 RSPH10B2B2RC85 870 aa19.48■□□□□ 0.71
TRAPPC3-207ENST00000497251 H3BRB1 525 aa19.48■□□□□ 0.71
TRAPPC3-207ENST00000497251 RFXAPO00287 272 aa19.48■□□□□ 0.71
TRAPPC3-207ENST00000497251 RSPH10BP0C881 870 aa19.48■□□□□ 0.71
TRAPPC3-207ENST00000497251 COL9A1P20849 921 aa19.48■□□□□ 0.71
TRAPPC3-207ENST00000497251 UBA1P22314 1058 aaKnown RBP19.48■□□□□ 0.71
TRAPPC3-207ENST00000497251 HOXA13P31271 388 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC3-207ENST00000497251 WTAPQ15007 396 aa19.48■□□□□ 0.71
TRAPPC3-207ENST00000497251 TTC22Q5TAA0 569 aa19.48■□□□□ 0.71
TRAPPC3-207ENST00000497251 TRAF7Q6Q0C0 670 aa19.48■□□□□ 0.71
TRAPPC3-207ENST00000497251 GIMAP8Q8ND71 665 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC3-207ENST00000497251 SAMD11Q96NU1 681 aa19.48■□□□□ 0.71
TRAPPC3-207ENST00000497251 INPP4AQ96PE3 977 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC3-207ENST00000497251 SENP7Q9BQF6 1050 aa19.48■□□□□ 0.71
TRAPPC3-207ENST00000497251 TUT1Q9H6E5 874 aaKnown RBP19.48■□□□□ 0.71
TRAPPC3-207ENST00000497251 FRMPD4Q14CM0 1322 aa19.48■□□□□ 0.71
TRAPPC3-207ENST00000497251 BAZ2BQ9UIF8 2168 aaKnown RBP19.47■□□□□ 0.71
TRAPPC3-207ENST00000497251 C17orf102A2RUQ5 167 aa19.47■□□□□ 0.71
TRAPPC3-207ENST00000497251 NOP56O00567 594 aaKnown RBP19.47■□□□□ 0.71
TRAPPC3-207ENST00000497251 LPXNO60711 386 aa19.47■□□□□ 0.71
TRAPPC3-207ENST00000497251 AMHP03971 560 aa19.47■□□□□ 0.71
TRAPPC3-207ENST00000497251 CYP21A2P08686 494 aa19.47■□□□□ 0.71
TRAPPC3-207ENST00000497251 KIF5BP33176 963 aa19.47■□□□□ 0.71
TRAPPC3-207ENST00000497251 METTL7BQ6UX53 244 aa19.47■□□□□ 0.71
TRAPPC3-207ENST00000497251 HOMER1Q86YM7 354 aa19.47■□□□□ 0.71
TRAPPC3-207ENST00000497251 TMTC2Q8N394 836 aa19.47■□□□□ 0.71
TRAPPC3-207ENST00000497251 PIGSQ96S52 555 aa19.47■□□□□ 0.71
TRAPPC3-207ENST00000497251 LZTS2Q9BRK4 669 aa19.47■□□□□ 0.71
TRAPPC3-207ENST00000497251 SPATA31C2B4DYI2 1134 aa19.46■□□□□ 0.71
TRAPPC3-207ENST00000497251 FIBPO43427 364 aa19.46■□□□□ 0.71
TRAPPC3-207ENST00000497251 GNAQP50148 359 aa19.46■□□□□ 0.71
TRAPPC3-207ENST00000497251 DEFB103AP81534 67 aa19.46■□□□□ 0.71
TRAPPC3-207ENST00000497251 SP2Q02086 613 aa19.46■□□□□ 0.71
TRAPPC3-207ENST00000497251 TFF2Q03403 129 aa19.46■□□□□ 0.71
TRAPPC3-207ENST00000497251 FCHSD1Q86WN1 690 aa19.46■□□□□ 0.71
TRAPPC3-207ENST00000497251 CUL5Q93034 780 aa19.46■□□□□ 0.71
TRAPPC3-207ENST00000497251 ATP6V0A1Q93050 837 aa19.46■□□□□ 0.71
TRAPPC3-207ENST00000497251 ZNF215Q9UL58 517 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC3-207ENST00000497251 PIK3CDO00329 1044 aa19.45■□□□□ 0.7
TRAPPC3-207ENST00000497251 ARHGEF15O94989 841 aa19.45■□□□□ 0.7
TRAPPC3-207ENST00000497251 CHMLP26374 656 aa19.45■□□□□ 0.7
TRAPPC3-207ENST00000497251 THPOP40225 353 aa19.45■□□□□ 0.7
TRAPPC3-207ENST00000497251 PLEKHG4Q58EX7 1191 aa19.45■□□□□ 0.7
TRAPPC3-207ENST00000497251 SEPT8Q92599 483 aa19.45■□□□□ 0.7
TRAPPC3-207ENST00000497251 SPZ1Q9BXG8 430 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms