RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 ABT1Q9ULW3 272 aaKnown RBP19.01■□□□□ 0.63
LMNA-216ENST00000496738 PDXDC2PQ6P474 469 aa19.01■□□□□ 0.63
LMNA-216ENST00000496738 SMC1BQ8NDV3 1235 aa19.01■□□□□ 0.63
LMNA-216ENST00000496738 PAGE5Q96GU1 130 aa19.01■□□□□ 0.63
LMNA-216ENST00000496738 GRPEL1Q9HAV7 217 aa19.01■□□□□ 0.63
LMNA-216ENST00000496738 CCDC39Q9UFE4 941 aa19.01■□□□□ 0.63
LMNA-216ENST00000496738 MEIS1O00470 390 aa19■□□□□ 0.63
LMNA-216ENST00000496738 TBX3O15119 743 aa19■□□□□ 0.63
LMNA-216ENST00000496738 ERVK-9P63128 1117 aa19■□□□□ 0.63
LMNA-216ENST00000496738 ERVK-24P63145 666 aa19■□□□□ 0.63
LMNA-216ENST00000496738 MDM2Q00987 491 aaPredicted RBP19■□□□□ 0.63
LMNA-216ENST00000496738 GRM1Q13255 1194 aa19■□□□□ 0.63
LMNA-216ENST00000496738 PDIA5Q14554 519 aa19■□□□□ 0.63
LMNA-216ENST00000496738 ZNF577Q9BSK1 485 aa19■□□□□ 0.63
LMNA-216ENST00000496738 FBXO40Q9UH90 709 aa19■□□□□ 0.63
LMNA-216ENST00000496738 LCTP09848 1927 aa19■□□□□ 0.63
LMNA-216ENST00000496738 CHMP2AO43633 222 aa19■□□□□ 0.63
LMNA-216ENST00000496738 ANO6Q4KMQ2 910 aa19■□□□□ 0.63
LMNA-216ENST00000496738 NAALADL2Q58DX5 795 aa19■□□□□ 0.63
LMNA-216ENST00000496738 FAM20AQ96MK3 541 aa19■□□□□ 0.63
LMNA-216ENST00000496738 TESPA1A2RU30 521 aaPredicted RBP18.99■□□□□ 0.63
LMNA-216ENST00000496738 SPIRE1Q08AE8 756 aa18.99■□□□□ 0.63
LMNA-216ENST00000496738 LRCH2Q5VUJ6 765 aa18.99■□□□□ 0.63
LMNA-216ENST00000496738 KRT79Q5XKE5 535 aa18.99■□□□□ 0.63
LMNA-216ENST00000496738 NSUN6Q8TEA1 469 aaKnown RBP18.99■□□□□ 0.63
LMNA-216ENST00000496738 DNAJC25Q9H1X3 360 aa18.99■□□□□ 0.63
LMNA-216ENST00000496738 PORCNQ9H237 461 aa18.99■□□□□ 0.63
LMNA-216ENST00000496738 BLZF1Q9H2G9 400 aa18.99■□□□□ 0.63
LMNA-216ENST00000496738 PCDHA5Q9Y5H7 936 aa18.99■□□□□ 0.63
LMNA-216ENST00000496738 ASTN1O14525 1302 aa18.99■□□□□ 0.63
LMNA-216ENST00000496738 DDX39AO00148 427 aaKnown RBP18.99■□□□□ 0.63
LMNA-216ENST00000496738 PGK2P07205 417 aa18.99■□□□□ 0.63
LMNA-216ENST00000496738 NR3C2P08235 984 aa18.99■□□□□ 0.63
LMNA-216ENST00000496738 SETQ01105 290 aaPredicted RBP18.99■□□□□ 0.63
LMNA-216ENST00000496738 GRB10Q13322 594 aa18.99■□□□□ 0.63
LMNA-216ENST00000496738 CALML4Q96GE6 196 aa18.99■□□□□ 0.63
LMNA-216ENST00000496738 CDK5RAP3Q96JB5 506 aa18.99■□□□□ 0.63
LMNA-216ENST00000496738 PNMA5Q96PV4 448 aa18.99■□□□□ 0.63
LMNA-216ENST00000496738 EFCC1Q9HA90 598 aa18.99■□□□□ 0.63
LMNA-216ENST00000496738 KCNH7Q9NS40 1196 aa18.99■□□□□ 0.63
LMNA-216ENST00000496738 HOOK1Q9UJC3 728 aaKnown RBP18.99■□□□□ 0.63
LMNA-216ENST00000496738 VAV3Q9UKW4 847 aa18.99■□□□□ 0.63
LMNA-216ENST00000496738 UBIAD1Q9Y5Z9 338 aa18.99■□□□□ 0.63
LMNA-216ENST00000496738 SLC25A27O95847 323 aa18.98■□□□□ 0.63
LMNA-216ENST00000496738 MRE11P49959 708 aa18.98■□□□□ 0.63
LMNA-216ENST00000496738 ECM1Q16610 540 aa18.98■□□□□ 0.63
LMNA-216ENST00000496738 MTRQ99707 1265 aa18.98■□□□□ 0.63
LMNA-216ENST00000496738 SLC45A1Q9Y2W3 748 aa18.98■□□□□ 0.63
LMNA-216ENST00000496738 TLL2Q9Y6L7 1015 aa18.98■□□□□ 0.63
LMNA-216ENST00000496738 PFASO15067 1338 aa18.98■□□□□ 0.63
LMNA-216ENST00000496738 ECM2O94769 699 aaPredicted RBP18.98■□□□□ 0.63
LMNA-216ENST00000496738 CCND2P30279 289 aa18.98■□□□□ 0.63
LMNA-216ENST00000496738 CCT6AP40227 531 aaKnown RBP18.98■□□□□ 0.63
LMNA-216ENST00000496738 FSTL1Q12841 308 aa18.98■□□□□ 0.63
LMNA-216ENST00000496738 MTMR1Q13613 665 aa18.98■□□□□ 0.63
LMNA-216ENST00000496738 DHX8Q14562 1220 aaKnown RBP18.98■□□□□ 0.63
LMNA-216ENST00000496738 KANK3Q6NY19 840 aa18.98■□□□□ 0.63
LMNA-216ENST00000496738 C11orf57Q6ZUT1 292 aaPredicted RBP18.98■□□□□ 0.63
LMNA-216ENST00000496738 GPRC5AQ8NFJ5 357 aa18.98■□□□□ 0.63
LMNA-216ENST00000496738 SLC5A5Q92911 643 aa18.98■□□□□ 0.63
LMNA-216ENST00000496738 PYM1Q9BRP8 204 aaKnown RBP18.98■□□□□ 0.63
LMNA-216ENST00000496738 IPO5O00410 1097 aaKnown RBP18.97■□□□□ 0.63
LMNA-216ENST00000496738 IGF2BP3O00425 579 aaKnown RBP eCLIP18.97■□□□□ 0.63
LMNA-216ENST00000496738 GAS7O60861 476 aa18.97■□□□□ 0.63
LMNA-216ENST00000496738 XRCC6P12956 609 aaKnown RBP eCLIP18.97■□□□□ 0.63
LMNA-216ENST00000496738 STX1AQ16623 288 aa18.97■□□□□ 0.63
LMNA-216ENST00000496738 SH3RF1Q7Z6J0 888 aa18.97■□□□□ 0.63
LMNA-216ENST00000496738 JADE2Q9NQC1 790 aa18.97■□□□□ 0.63
LMNA-216ENST00000496738 USP25Q9UHP3 1055 aa18.97■□□□□ 0.63
LMNA-216ENST00000496738 POTEB2H3BUK9 544 aa18.96■□□□□ 0.63
LMNA-216ENST00000496738 EML1O00423 815 aa18.96■□□□□ 0.63
LMNA-216ENST00000496738 SLC10A3P09131 477 aa18.96■□□□□ 0.63
LMNA-216ENST00000496738 VSIG10LQ86VR7 867 aa18.96■□□□□ 0.63
LMNA-216ENST00000496738 PARK7Q99497 189 aaKnown RBP18.96■□□□□ 0.63
LMNA-216ENST00000496738 MMP19Q99542 508 aa18.96■□□□□ 0.63
LMNA-216ENST00000496738 TUBE1Q9UJT0 475 aa18.96■□□□□ 0.63
LMNA-216ENST00000496738 POTEB3A0JP26 581 aa18.96■□□□□ 0.63
LMNA-216ENST00000496738 PSMD10O75832 226 aa18.96■□□□□ 0.63
LMNA-216ENST00000496738 TPM2P07951 284 aa18.96■□□□□ 0.63
LMNA-216ENST00000496738 DPCR1Q3MIW9 517 aa18.96■□□□□ 0.63
LMNA-216ENST00000496738 POTEBQ6S5H4 581 aa18.96■□□□□ 0.63
LMNA-216ENST00000496738 KCNK18Q7Z418 384 aa18.96■□□□□ 0.63
LMNA-216ENST00000496738 SOWAHBA6NEL2 793 aa18.95■□□□□ 0.62
LMNA-216ENST00000496738 MED24O75448 989 aa18.95■□□□□ 0.62
LMNA-216ENST00000496738 CYP4A11Q02928 519 aa18.95■□□□□ 0.62
LMNA-216ENST00000496738 CUL4BQ13620 913 aa18.95■□□□□ 0.62
LMNA-216ENST00000496738 KCTD2Q14681 263 aa18.95■□□□□ 0.62
LMNA-216ENST00000496738 SMARCE1Q969G3 411 aa18.95■□□□□ 0.62
LMNA-216ENST00000496738 CCDC34Q96HJ3 373 aa18.95■□□□□ 0.62
LMNA-216ENST00000496738 AGO4Q9HCK5 861 aaKnown RBP18.95■□□□□ 0.62
LMNA-216ENST00000496738 ALDH5A1P51649 535 aaPredicted RBP18.95■□□□□ 0.62
LMNA-216ENST00000496738 ITGB3BPQ13352 177 aaPredicted RBP18.95■□□□□ 0.62
LMNA-216ENST00000496738 OTOP1Q7RTM1 612 aa18.95■□□□□ 0.62
LMNA-216ENST00000496738 ELOA2Q8IYF1 753 aaPredicted RBP18.95■□□□□ 0.62
LMNA-216ENST00000496738 GTF3C2Q8WUA4 911 aaPredicted RBP18.95■□□□□ 0.62
LMNA-216ENST00000496738 UNC45AQ9H3U1 944 aa18.95■□□□□ 0.62
LMNA-216ENST00000496738 MANSC4A6NHS7 340 aaPredicted RBP18.94■□□□□ 0.62
LMNA-216ENST00000496738 TMEM88BA6NKF7 163 aa18.94■□□□□ 0.62
LMNA-216ENST00000496738 DPYDQ12882 1025 aa18.94■□□□□ 0.62
LMNA-216ENST00000496738 NIPA1Q7RTP0 329 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms