RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 CNGA1P29973 690 aa20.81■□□□□ 0.92
TSSC4-210ENST00000496468 CCND3P30281 292 aaPredicted RBP20.81■□□□□ 0.92
TSSC4-210ENST00000496468 ICAM3P32942 547 aa20.81■□□□□ 0.92
TSSC4-210ENST00000496468 ADCYAP1R1P41586 468 aa20.81■□□□□ 0.92
TSSC4-210ENST00000496468 ORC2Q13416 577 aaPredicted RBP20.81■□□□□ 0.92
TSSC4-210ENST00000496468 NBR1Q14596 966 aa20.81■□□□□ 0.92
TSSC4-210ENST00000496468 Q4G0T1 1027 aa20.81■□□□□ 0.92
TSSC4-210ENST00000496468 KCNV1Q6PIU1 500 aa20.81■□□□□ 0.92
TSSC4-210ENST00000496468 LENG9Q96B70 501 aa20.81■□□□□ 0.92
TSSC4-210ENST00000496468 MBOAT7Q96N66 472 aa20.81■□□□□ 0.92
TSSC4-210ENST00000496468 RBM47A0AV96 593 aaKnown RBP20.8■□□□□ 0.92
TSSC4-210ENST00000496468 SEPT4O43236 478 aa20.8■□□□□ 0.92
TSSC4-210ENST00000496468 MCM7P33993 719 aa20.8■□□□□ 0.92
TSSC4-210ENST00000496468 TOB1P50616 345 aaPredicted RBP20.8■□□□□ 0.92
TSSC4-210ENST00000496468 SEMA3FQ13275 785 aa20.8■□□□□ 0.92
TSSC4-210ENST00000496468 POTEDQ86YR6 584 aa20.8■□□□□ 0.92
TSSC4-210ENST00000496468 ARMC5Q96C12 935 aa20.8■□□□□ 0.92
TSSC4-210ENST00000496468 HMX1Q9NP08 348 aaPredicted RBP20.8■□□□□ 0.92
TSSC4-210ENST00000496468 KCNH7Q9NS40 1196 aa20.8■□□□□ 0.92
TSSC4-210ENST00000496468 FAM184BQ9ULE4 1060 aa20.8■□□□□ 0.92
TSSC4-210ENST00000496468 ZDHHC9Q9Y397 364 aa20.8■□□□□ 0.92
TSSC4-210ENST00000496468 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.79■□□□□ 0.92
TSSC4-210ENST00000496468 SPATA31C2B4DYI2 1134 aa20.79■□□□□ 0.92
TSSC4-210ENST00000496468 ARIH2O95376 493 aa20.79■□□□□ 0.92
TSSC4-210ENST00000496468 ARP10275 920 aa20.79■□□□□ 0.92
TSSC4-210ENST00000496468 TXNP10599 105 aaKnown RBP20.79■□□□□ 0.92
TSSC4-210ENST00000496468 UBA1P22314 1058 aaKnown RBP20.79■□□□□ 0.92
TSSC4-210ENST00000496468 TNFAIP2Q03169 654 aa20.79■□□□□ 0.92
TSSC4-210ENST00000496468 FAM173BQ6P4H8 233 aa20.79■□□□□ 0.92
TSSC4-210ENST00000496468 ZNF333Q96JL9 665 aa20.79■□□□□ 0.92
TSSC4-210ENST00000496468 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.79■□□□□ 0.92
TSSC4-210ENST00000496468 AGO4Q9HCK5 861 aaKnown RBP20.79■□□□□ 0.92
TSSC4-210ENST00000496468 CHMP5Q9NZZ3 219 aa20.79■□□□□ 0.92
TSSC4-210ENST00000496468 PKD2L1Q9P0L9 805 aa20.79■□□□□ 0.92
TSSC4-210ENST00000496468 PCDHB6Q9Y5E3 794 aa20.79■□□□□ 0.92
TSSC4-210ENST00000496468 MAFGO15525 162 aa20.78■□□□□ 0.92
TSSC4-210ENST00000496468 TGFB3P10600 412 aa20.78■□□□□ 0.92
TSSC4-210ENST00000496468 ZNF174Q15697 407 aa20.78■□□□□ 0.92
TSSC4-210ENST00000496468 CALCRLQ16602 461 aa20.78■□□□□ 0.92
TSSC4-210ENST00000496468 LY6KQ17RY6 165 aa20.78■□□□□ 0.92
TSSC4-210ENST00000496468 IQSEC1Q6DN90 963 aa20.78■□□□□ 0.92
TSSC4-210ENST00000496468 LENG1Q96BZ8 264 aaPredicted RBP20.78■□□□□ 0.92
TSSC4-210ENST00000496468 ZNF577Q9BSK1 485 aa20.78■□□□□ 0.92
TSSC4-210ENST00000496468 UNC93B1Q9H1C4 597 aa20.78■□□□□ 0.92
TSSC4-210ENST00000496468 ATP6V1DQ9Y5K8 247 aa20.78■□□□□ 0.92
TSSC4-210ENST00000496468 DOCK5Q9H7D0 1870 aa20.77■□□□□ 0.92
TSSC4-210ENST00000496468 IPO5O00410 1097 aaKnown RBP20.77■□□□□ 0.92
TSSC4-210ENST00000496468 NKRFO15226 690 aaKnown RBP eCLIP20.77■□□□□ 0.92
TSSC4-210ENST00000496468 MSH4O15457 936 aa20.77■□□□□ 0.92
TSSC4-210ENST00000496468 ADCY6O43306 1168 aa20.77■□□□□ 0.92
TSSC4-210ENST00000496468 MSCO60682 206 aa20.77■□□□□ 0.92
TSSC4-210ENST00000496468 MYCP01106 439 aaPredicted RBP20.77■□□□□ 0.92
TSSC4-210ENST00000496468 RARBP10826 455 aa20.77■□□□□ 0.92
TSSC4-210ENST00000496468 KCNA2P16389 499 aa20.77■□□□□ 0.92
TSSC4-210ENST00000496468 SMPD1P17405 629 aa20.77■□□□□ 0.92
TSSC4-210ENST00000496468 FOXD4L6Q3SYB3 417 aaPredicted RBP20.77■□□□□ 0.92
TSSC4-210ENST00000496468 DUSP28Q4G0W2 176 aa20.77■□□□□ 0.92
TSSC4-210ENST00000496468 CCDC62Q6P9F0 684 aa20.77■□□□□ 0.92
TSSC4-210ENST00000496468 FOXD4L3Q6VB84 417 aaPredicted RBP20.77■□□□□ 0.92
TSSC4-210ENST00000496468 TLK2Q86UE8 772 aa20.77■□□□□ 0.92
TSSC4-210ENST00000496468 ETNPPLQ8TBG4 499 aa20.77■□□□□ 0.92
TSSC4-210ENST00000496468 SDF4Q9BRK5 362 aa20.77■□□□□ 0.92
TSSC4-210ENST00000496468 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.77■□□□□ 0.92
TSSC4-210ENST00000496468 DDX20Q9UHI6 824 aaKnown RBP20.77■□□□□ 0.92
TSSC4-210ENST00000496468 DDX41Q9UJV9 622 aaKnown RBP20.77■□□□□ 0.92
TSSC4-210ENST00000496468 MARCH6O60337 910 aa20.76■□□□□ 0.91
TSSC4-210ENST00000496468 GGPS1O95749 300 aa20.76■□□□□ 0.91
TSSC4-210ENST00000496468 BMP15O95972 392 aa20.76■□□□□ 0.91
TSSC4-210ENST00000496468 CCL5P13501 91 aa20.76■□□□□ 0.91
TSSC4-210ENST00000496468 NEDD9Q14511 834 aa20.76■□□□□ 0.91
TSSC4-210ENST00000496468 MTFR1Q15390 333 aa20.76■□□□□ 0.91
TSSC4-210ENST00000496468 GJC2Q5T442 439 aaPredicted RBP20.76■□□□□ 0.91
TSSC4-210ENST00000496468 GIMAP8Q8ND71 665 aaPredicted RBP20.76■□□□□ 0.91
TSSC4-210ENST00000496468 ZNF396Q96N95 335 aaPredicted RBP20.76■□□□□ 0.91
TSSC4-210ENST00000496468 UIMC1Q96RL1 719 aa20.76■□□□□ 0.91
TSSC4-210ENST00000496468 SENP7Q9BQF6 1050 aa20.76■□□□□ 0.91
TSSC4-210ENST00000496468 KCNMB3Q9NPA1 279 aa20.76■□□□□ 0.91
TSSC4-210ENST00000496468 TCEAL9Q9UHQ7 104 aa20.76■□□□□ 0.91
TSSC4-210ENST00000496468 CEP131Q9UPN4 1083 aa20.76■□□□□ 0.91
TSSC4-210ENST00000496468 TBX3O15119 743 aa20.75■□□□□ 0.91
TSSC4-210ENST00000496468 GH1P01241 217 aa20.75■□□□□ 0.91
TSSC4-210ENST00000496468 OR52Z1P0C646 297 aa20.75■□□□□ 0.91
TSSC4-210ENST00000496468 ITGB3BPQ13352 177 aaPredicted RBP20.75■□□□□ 0.91
TSSC4-210ENST00000496468 LRCH2Q5VUJ6 765 aa20.75■□□□□ 0.91
TSSC4-210ENST00000496468 ANO1Q5XXA6 986 aa20.75■□□□□ 0.91
TSSC4-210ENST00000496468 SLFN12Q8IYM2 578 aa20.75■□□□□ 0.91
TSSC4-210ENST00000496468 OR6J1Q8NGC5 347 aa20.75■□□□□ 0.91
TSSC4-210ENST00000496468 COPS5Q92905 334 aa20.75■□□□□ 0.91
TSSC4-210ENST00000496468 FTOQ9C0B1 505 aaKnown RBP eCLIP20.75■□□□□ 0.91
TSSC4-210ENST00000496468 RNF208Q9H0X6 261 aa20.75■□□□□ 0.91
TSSC4-210ENST00000496468 PAK6Q9NQU5 681 aaPredicted RBP20.75■□□□□ 0.91
TSSC4-210ENST00000496468 GNEQ9Y223 722 aaKnown RBP20.75■□□□□ 0.91
TSSC4-210ENST00000496468 NFASCO94856 1347 aa20.75■□□□□ 0.91
TSSC4-210ENST00000496468 SORBS3O60504 671 aa20.74■□□□□ 0.91
TSSC4-210ENST00000496468 GAS7O60861 476 aa20.74■□□□□ 0.91
TSSC4-210ENST00000496468 ATP9AO75110 1047 aa20.74■□□□□ 0.91
TSSC4-210ENST00000496468 DUSP11O75319 330 aaKnown RBP20.74■□□□□ 0.91
TSSC4-210ENST00000496468 BAG4O95429 457 aaKnown RBP20.74■□□□□ 0.91
TSSC4-210ENST00000496468 SP2Q02086 613 aa20.74■□□□□ 0.91
TSSC4-210ENST00000496468 SF3A1Q15459 793 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms