RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 CCDC196A0A1B0GTZ2 297 aa16.63■□□□□ 0.25
PDAP1-204ENST00000496335 TGFB3P10600 412 aa16.63■□□□□ 0.25
PDAP1-204ENST00000496335 PDIA3P30101 505 aaKnown RBP16.63■□□□□ 0.25
PDAP1-204ENST00000496335 CCT2P78371 535 aaKnown RBP16.63■□□□□ 0.25
PDAP1-204ENST00000496335 SEMA3FQ13275 785 aa16.63■□□□□ 0.25
PDAP1-204ENST00000496335 DGKDQ16760 1214 aa16.63■□□□□ 0.25
PDAP1-204ENST00000496335 HSDL1Q3SXM5 330 aa16.63■□□□□ 0.25
PDAP1-204ENST00000496335 MFSD5Q6N075 450 aa16.63■□□□□ 0.25
PDAP1-204ENST00000496335 PPTC7Q8NI37 304 aa16.63■□□□□ 0.25
PDAP1-204ENST00000496335 SPATA33Q96N06 139 aa16.63■□□□□ 0.25
PDAP1-204ENST00000496335 TM6SF1Q9BZW5 370 aa16.63■□□□□ 0.25
PDAP1-204ENST00000496335 HIPK3Q9H422 1215 aa16.63■□□□□ 0.25
PDAP1-204ENST00000496335 PCDHA6Q9UN73 950 aa16.63■□□□□ 0.25
PDAP1-204ENST00000496335 PCDHA8Q9Y5H6 950 aa16.63■□□□□ 0.25
PDAP1-204ENST00000496335 SPDYE3A6NKU9 549 aa16.62■□□□□ 0.25
PDAP1-204ENST00000496335 SPATA31C2B4DYI2 1134 aa16.62■□□□□ 0.25
PDAP1-204ENST00000496335 STAM2O75886 525 aa16.62■□□□□ 0.25
PDAP1-204ENST00000496335 ZNF286BP0CG31 522 aa16.62■□□□□ 0.25
PDAP1-204ENST00000496335 CYP2C9P11712 490 aa16.62■□□□□ 0.25
PDAP1-204ENST00000496335 CSF2RAP15509 400 aa16.62■□□□□ 0.25
PDAP1-204ENST00000496335 ICAM3P32942 547 aa16.62■□□□□ 0.25
PDAP1-204ENST00000496335 EVCP57679 992 aa16.62■□□□□ 0.25
PDAP1-204ENST00000496335 GNPTABQ3T906 1256 aa16.62■□□□□ 0.25
PDAP1-204ENST00000496335 NFRKBQ6P4R8 1299 aa16.62■□□□□ 0.25
PDAP1-204ENST00000496335 PHKBQ93100 1093 aa16.62■□□□□ 0.25
PDAP1-204ENST00000496335 NOC4LQ9BVI4 516 aaKnown RBP16.62■□□□□ 0.25
PDAP1-204ENST00000496335 MLXIPQ9HAP2 919 aa16.62■□□□□ 0.25
PDAP1-204ENST00000496335 NCOA5Q9HCD5 579 aaKnown RBP16.62■□□□□ 0.25
PDAP1-204ENST00000496335 RIC8AQ9NPQ8 531 aa16.62■□□□□ 0.25
PDAP1-204ENST00000496335 BARHL2Q9NY43 387 aa16.62■□□□□ 0.25
PDAP1-204ENST00000496335 TRIP12Q14669 1992 aaPredicted RBP16.62■□□□□ 0.25
PDAP1-204ENST00000496335 NID2Q14112 1375 aa16.62■□□□□ 0.25
PDAP1-204ENST00000496335 SMCO2A6NFE2 343 aa16.61■□□□□ 0.25
PDAP1-204ENST00000496335 FIBPO43427 364 aa16.61■□□□□ 0.25
PDAP1-204ENST00000496335 ADCY7P51828 1080 aa16.61■□□□□ 0.25
PDAP1-204ENST00000496335 CCL23P55773 120 aa16.61■□□□□ 0.25
PDAP1-204ENST00000496335 NTRK3Q16288 839 aa16.61■□□□□ 0.25
PDAP1-204ENST00000496335 PFKFB3Q16875 520 aaPredicted RBP16.61■□□□□ 0.25
PDAP1-204ENST00000496335 PPP1R18Q6NYC8 613 aa16.61■□□□□ 0.25
PDAP1-204ENST00000496335 XRRA1Q6P2D8 792 aa16.61■□□□□ 0.25
PDAP1-204ENST00000496335 C16orf59Q7L2K0 433 aa16.61■□□□□ 0.25
PDAP1-204ENST00000496335 TMEM199Q8N511 208 aa16.61■□□□□ 0.25
PDAP1-204ENST00000496335 PGBD1Q96JS3 809 aa16.61■□□□□ 0.25
PDAP1-204ENST00000496335 hCG_1984214I3L0E3 225 aa16.6■□□□□ 0.25
PDAP1-204ENST00000496335 PRPF3O43395 683 aaKnown RBP16.6■□□□□ 0.25
PDAP1-204ENST00000496335 PPFIA4O75335 1185 aa16.6■□□□□ 0.25
PDAP1-204ENST00000496335 SUPT20HL2P0C7V6 817 aa16.6■□□□□ 0.25
PDAP1-204ENST00000496335 ACRP10323 421 aa16.6■□□□□ 0.25
PDAP1-204ENST00000496335 HOXD8P13378 290 aaPredicted RBP16.6■□□□□ 0.25
PDAP1-204ENST00000496335 SCG2P13521 617 aa16.6■□□□□ 0.25
PDAP1-204ENST00000496335 ITGB5P18084 799 aa16.6■□□□□ 0.25
PDAP1-204ENST00000496335 PSEN2P49810 448 aa16.6■□□□□ 0.25
PDAP1-204ENST00000496335 PKN1Q16512 942 aa16.6■□□□□ 0.25
PDAP1-204ENST00000496335 CYFIP1Q7L576 1253 aa16.6■□□□□ 0.25
PDAP1-204ENST00000496335 ZNF713Q8N859 430 aaPredicted RBP16.6■□□□□ 0.25
PDAP1-204ENST00000496335 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.6■□□□□ 0.25
PDAP1-204ENST00000496335 ALG1Q9BT22 464 aa16.6■□□□□ 0.25
PDAP1-204ENST00000496335 WNT8AQ9H1J5 351 aa16.6■□□□□ 0.25
PDAP1-204ENST00000496335 PDRG1Q9NUG6 133 aa16.6■□□□□ 0.25
PDAP1-204ENST00000496335 TMEM260Q9NX78 707 aa16.6■□□□□ 0.25
PDAP1-204ENST00000496335 TELO2Q9Y4R8 837 aa16.6■□□□□ 0.25
PDAP1-204ENST00000496335 SCN5AQ14524 2016 aa16.59■□□□□ 0.25
PDAP1-204ENST00000496335 ADAMTS3O15072 1205 aa16.59■□□□□ 0.25
PDAP1-204ENST00000496335 PTPN11Q06124 597 aaPredicted RBP16.59■□□□□ 0.25
PDAP1-204ENST00000496335 PPIGQ13427 754 aaKnown RBP eCLIP16.59■□□□□ 0.256e-13■□□□□ 8.8
PDAP1-204ENST00000496335 NEDD9Q14511 834 aa16.59■□□□□ 0.25
PDAP1-204ENST00000496335 MFSD10Q14728 455 aa16.59■□□□□ 0.25
PDAP1-204ENST00000496335 KIAA0753Q2KHM9 967 aa16.59■□□□□ 0.25
PDAP1-204ENST00000496335 NLRX1Q86UT6 975 aa16.59■□□□□ 0.25
PDAP1-204ENST00000496335 SCLYQ96I15 445 aa16.59■□□□□ 0.25
PDAP1-204ENST00000496335 RNPC3Q96LT9 517 aaKnown RBP16.59■□□□□ 0.25
PDAP1-204ENST00000496335 SLC26A6Q9BXS9 759 aa16.59■□□□□ 0.25
PDAP1-204ENST00000496335 HAS3O00219 553 aa16.58■□□□□ 0.24
PDAP1-204ENST00000496335 ATP9AO75110 1047 aa16.58■□□□□ 0.24
PDAP1-204ENST00000496335 SEC24BO95487 1268 aa16.58■□□□□ 0.24
PDAP1-204ENST00000496335 F2P00734 622 aa16.58■□□□□ 0.24
PDAP1-204ENST00000496335 IFNAR1P17181 557 aa16.58■□□□□ 0.24
PDAP1-204ENST00000496335 SP4Q02446 784 aa16.58■□□□□ 0.24
PDAP1-204ENST00000496335 STK3Q13188 491 aa16.58■□□□□ 0.24
PDAP1-204ENST00000496335 TMEM240Q5SV17 173 aa16.58■□□□□ 0.24
PDAP1-204ENST00000496335 GDF6Q6KF10 455 aaPredicted RBP16.58■□□□□ 0.24
PDAP1-204ENST00000496335 METTL7BQ6UX53 244 aa16.58■□□□□ 0.24
PDAP1-204ENST00000496335 ZNF365Q70YC5 407 aa16.58■□□□□ 0.24
PDAP1-204ENST00000496335 Q7L0L9 218 aa16.58■□□□□ 0.24
PDAP1-204ENST00000496335 GPRASP2Q96D09 838 aa16.58■□□□□ 0.24
PDAP1-204ENST00000496335 CTAGE1Q96RT6 745 aa16.58■□□□□ 0.24
PDAP1-204ENST00000496335 ANO3Q9BYT9 981 aa16.58■□□□□ 0.24
PDAP1-204ENST00000496335 PKD2L1Q9P0L9 805 aa16.58■□□□□ 0.24
PDAP1-204ENST00000496335 HDAC6Q9UBN7 1215 aa16.58■□□□□ 0.24
PDAP1-204ENST00000496335 NOD1Q9Y239 953 aa16.58■□□□□ 0.24
PDAP1-204ENST00000496335 UBIAD1Q9Y5Z9 338 aa16.58■□□□□ 0.24
PDAP1-204ENST00000496335 NOP56O00567 594 aaKnown RBP16.57■□□□□ 0.24
PDAP1-204ENST00000496335 CLK2P49760 499 aaKnown RBP16.57■□□□□ 0.24
PDAP1-204ENST00000496335 AKAP17AQ02040 695 aaKnown RBP16.57■□□□□ 0.24
PDAP1-204ENST00000496335 PTGISQ16647 500 aa16.57■□□□□ 0.24
PDAP1-204ENST00000496335 JAKMIP3Q5VZ66 844 aa16.57■□□□□ 0.24
PDAP1-204ENST00000496335 SESTD1Q86VW0 696 aa16.57■□□□□ 0.24
PDAP1-204ENST00000496335 C7orf31Q8N865 590 aa16.57■□□□□ 0.24
PDAP1-204ENST00000496335 CYP2W1Q8TAV3 490 aa16.57■□□□□ 0.24
PDAP1-204ENST00000496335 ZNF274Q96GC6 653 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms