RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 MTMR8Q96EF0 704 aa12.62□□□□□ -0.39
RNF220-217ENST00000496262 SPATA33Q96N06 139 aa12.62□□□□□ -0.39
RNF220-217ENST00000496262 CTAGE1Q96RT6 745 aa12.62□□□□□ -0.39
RNF220-217ENST00000496262 SLC9A7Q96T83 725 aa12.62□□□□□ -0.39
RNF220-217ENST00000496262 PDCD2LQ9BRP1 358 aa12.62□□□□□ -0.39
RNF220-217ENST00000496262 GTF2IRD1Q9UHL9 959 aa12.62□□□□□ -0.39
RNF220-217ENST00000496262 TANC1Q9C0D5 1861 aa12.61□□□□□ -0.39
RNF220-217ENST00000496262 GCOM1H8Y6P7 765 aaPredicted RBP12.61□□□□□ -0.39
RNF220-217ENST00000496262 RGS20O76081 388 aa12.61□□□□□ -0.39
RNF220-217ENST00000496262 ARHGEF15O94989 841 aa12.61□□□□□ -0.39
RNF220-217ENST00000496262 GGPS1O95749 300 aa12.61□□□□□ -0.39
RNF220-217ENST00000496262 POLR2MP0CAP2 368 aa12.61□□□□□ -0.39
RNF220-217ENST00000496262 SELPP16109 830 aa12.61□□□□□ -0.39
RNF220-217ENST00000496262 ZNF200P98182 395 aaPredicted RBP12.61□□□□□ -0.39
RNF220-217ENST00000496262 STOX1Q6ZVD7 989 aa12.61□□□□□ -0.39
RNF220-217ENST00000496262 LRRC8DQ7L1W4 858 aa12.61□□□□□ -0.39
RNF220-217ENST00000496262 SESTD1Q86VW0 696 aa12.61□□□□□ -0.39
RNF220-217ENST00000496262 HERC6Q8IVU3 1022 aa12.61□□□□□ -0.39
RNF220-217ENST00000496262 PPTC7Q8NI37 304 aa12.61□□□□□ -0.39
RNF220-217ENST00000496262 ARNTL2Q8WYA1 636 aa12.61□□□□□ -0.39
RNF220-217ENST00000496262 EMID1Q96A84 441 aaPredicted RBP12.61□□□□□ -0.39
RNF220-217ENST00000496262 MYL10Q9BUA6 226 aa12.61□□□□□ -0.39
RNF220-217ENST00000496262 KATNAL1Q9BW62 490 aa12.61□□□□□ -0.39
RNF220-217ENST00000496262 EPOPA6NHQ4 379 aa12.6□□□□□ -0.39
RNF220-217ENST00000496262 KIF28PB7ZC32 967 aa12.6□□□□□ -0.39
RNF220-217ENST00000496262 CYTH3O43739 400 aa12.6□□□□□ -0.39
RNF220-217ENST00000496262 TLL1O43897 1013 aa12.6□□□□□ -0.39
RNF220-217ENST00000496262 F2P00734 622 aa12.6□□□□□ -0.39
RNF220-217ENST00000496262 CKBP12277 381 aa12.6□□□□□ -0.39
RNF220-217ENST00000496262 UBA1P22314 1058 aaKnown RBP12.6□□□□□ -0.39
RNF220-217ENST00000496262 CCND2P30279 289 aa12.6□□□□□ -0.39
RNF220-217ENST00000496262 HSDL1Q3SXM5 330 aa12.6□□□□□ -0.39
RNF220-217ENST00000496262 CELF3Q5SZQ8 465 aaKnown RBP12.6□□□□□ -0.39
RNF220-217ENST00000496262 MYSM1Q5VVJ2 828 aa12.6□□□□□ -0.39
RNF220-217ENST00000496262 KRT40Q6A162 431 aa12.6□□□□□ -0.39
RNF220-217ENST00000496262 CATIPQ7Z7H3 387 aa12.6□□□□□ -0.39
RNF220-217ENST00000496262 ZBED2Q9BTP6 218 aa12.6□□□□□ -0.39
RNF220-217ENST00000496262 RIOX1Q9H6W3 641 aa12.6□□□□□ -0.39
RNF220-217ENST00000496262 MLXIPQ9HAP2 919 aa12.6□□□□□ -0.39
RNF220-217ENST00000496262 MYH6P13533 1939 aa12.6□□□□□ -0.39
RNF220-217ENST00000496262 REV3LO60673 3130 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 PNMA6FA0A0J9YX94 578 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 SGSM2O43147 1006 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 GTPBP6O43824 516 aaPredicted RBP12.59□□□□□ -0.39
RNF220-217ENST00000496262 NBNO60934 754 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 BAIAP3O94812 1187 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 ANTXR2P58335 489 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 WDR5P61964 334 aaKnown RBP12.59□□□□□ -0.39
RNF220-217ENST00000496262 DEFB103AP81534 67 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 MRPS5P82675 430 aaKnown RBP12.59□□□□□ -0.39
RNF220-217ENST00000496262 SP2Q02086 613 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 GHRHRQ02643 423 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 TAP1Q03518 808 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 TROAPQ12815 778 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 GPNMBQ14956 572 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 TCTN1Q2MV58 587 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 FAM117BQ6P1L5 589 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 SPRED2Q7Z698 418 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 VSIG10LQ86VR7 867 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 PHOSPHO2Q8TCD6 241 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 ADAMTS19Q8TE59 1207 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 ATXN2LQ8WWM7 1075 aaKnown RBP12.59□□□□□ -0.39
RNF220-217ENST00000496262 WNT8BQ93098 351 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 TBC1D32Q96NH3 1257 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 ASB2Q96Q27 587 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 TSPYL2Q9H2G4 693 aaPredicted RBP12.59□□□□□ -0.39
RNF220-217ENST00000496262 BCAS3Q9H6U6 928 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 MAP3K20Q9NYL2 800 aaKnown RBP12.59□□□□□ -0.39
RNF220-217ENST00000496262 RTEL1Q9NZ71 1219 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 MTUS1Q9ULD2 1270 aa12.59□□□□□ -0.39
RNF220-217ENST00000496262 RBM8AQ9Y5S9 174 aaKnown RBP12.59□□□□□ -0.39
RNF220-217ENST00000496262 KIAA1217Q5T5P2 1943 aa12.58□□□□□ -0.39
RNF220-217ENST00000496262 LCHNA4D1U4 455 aa12.58□□□□□ -0.4
RNF220-217ENST00000496262 TNFRSF10AO00220 468 aa12.58□□□□□ -0.4
RNF220-217ENST00000496262 NOP56O00567 594 aaKnown RBP12.58□□□□□ -0.4
RNF220-217ENST00000496262 THPOP40225 353 aa12.58□□□□□ -0.4
RNF220-217ENST00000496262 SP4Q02446 784 aa12.58□□□□□ -0.4
RNF220-217ENST00000496262 TFF2Q03403 129 aa12.58□□□□□ -0.4
RNF220-217ENST00000496262 TRAF1Q13077 416 aa12.58□□□□□ -0.4
RNF220-217ENST00000496262 PTK7Q13308 1070 aa12.58□□□□□ -0.4
RNF220-217ENST00000496262 HIC1Q14526 733 aa12.58□□□□□ -0.4
RNF220-217ENST00000496262 L1TD1Q5T7N2 865 aaKnown RBP12.58□□□□□ -0.4
RNF220-217ENST00000496262 ZNF618Q5T7W0 954 aa12.58□□□□□ -0.4
RNF220-217ENST00000496262 CNKSR3Q6P9H4 555 aa12.58□□□□□ -0.4
RNF220-217ENST00000496262 KCNV1Q6PIU1 500 aa12.58□□□□□ -0.4
RNF220-217ENST00000496262 NFXL1Q6ZNB6 911 aa12.58□□□□□ -0.4
RNF220-217ENST00000496262 RAB11FIP4Q86YS3 637 aa12.58□□□□□ -0.4
RNF220-217ENST00000496262 MB21D2Q8IYB1 491 aaPredicted RBP12.58□□□□□ -0.4
RNF220-217ENST00000496262 XIRP2A4UGR9 3374 aa12.57□□□□□ -0.4
RNF220-217ENST00000496262 HAS3O00219 553 aa12.57□□□□□ -0.4
RNF220-217ENST00000496262 PRC1O43663 620 aa12.57□□□□□ -0.4
RNF220-217ENST00000496262 PPFIA4O75335 1185 aa12.57□□□□□ -0.4
RNF220-217ENST00000496262 SEC24BO95487 1268 aa12.57□□□□□ -0.4
RNF220-217ENST00000496262 RXRAP19793 462 aa12.57□□□□□ -0.4
RNF220-217ENST00000496262 GNPTABQ3T906 1256 aa12.57□□□□□ -0.4
RNF220-217ENST00000496262 CASC1Q6TDU7 716 aa12.57□□□□□ -0.4
RNF220-217ENST00000496262 ZNF654Q8IZM8 581 aa12.57□□□□□ -0.4
RNF220-217ENST00000496262 CMTR1Q8N1G2 835 aaKnown RBP12.57□□□□□ -0.4
RNF220-217ENST00000496262 CTCFLQ8NI51 663 aaPredicted RBP12.57□□□□□ -0.4
RNF220-217ENST00000496262 SMARCC2Q8TAQ2 1214 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms