RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 TMEM60Q9H2L4 133 aa15.33■□□□□ 0.05
PTPN7-218ENST00000496197 VTA1Q9NP79 307 aa15.33■□□□□ 0.05
PTPN7-218ENST00000496197 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.33■□□□□ 0.05
PTPN7-218ENST00000496197 PKD2L1Q9P0L9 805 aa15.33■□□□□ 0.05
PTPN7-218ENST00000496197 TELO2Q9Y4R8 837 aa15.33■□□□□ 0.05
PTPN7-218ENST00000496197 CLIC4Q9Y696 253 aa15.33■□□□□ 0.05
PTPN7-218ENST00000496197 RBM47A0AV96 593 aaKnown RBP15.33■□□□□ 0.04
PTPN7-218ENST00000496197 SORBS3O60504 671 aa15.33■□□□□ 0.04
PTPN7-218ENST00000496197 PDIA4P13667 645 aaKnown RBP15.33■□□□□ 0.04
PTPN7-218ENST00000496197 ZNF76P36508 570 aa15.33■□□□□ 0.04
PTPN7-218ENST00000496197 MTMR1Q13613 665 aa15.33■□□□□ 0.04
PTPN7-218ENST00000496197 LY6KQ17RY6 165 aa15.33■□□□□ 0.04
PTPN7-218ENST00000496197 CCDC144BQ3MJ40 725 aa15.33■□□□□ 0.04
PTPN7-218ENST00000496197 Q4G0T1 1027 aa15.33■□□□□ 0.04
PTPN7-218ENST00000496197 MFSD14CQ5VZR4 134 aa15.33■□□□□ 0.04
PTPN7-218ENST00000496197 CCDC62Q6P9F0 684 aa15.33■□□□□ 0.04
PTPN7-218ENST00000496197 MOXD1Q6UVY6 613 aa15.33■□□□□ 0.04
PTPN7-218ENST00000496197 PLA2G4DQ86XP0 818 aa15.33■□□□□ 0.04
PTPN7-218ENST00000496197 TRMT44Q8IYL2 757 aaKnown RBP15.33■□□□□ 0.04
PTPN7-218ENST00000496197 C4orf32Q8N8J7 132 aa15.33■□□□□ 0.04
PTPN7-218ENST00000496197 ETNPPLQ8TBG4 499 aa15.33■□□□□ 0.04
PTPN7-218ENST00000496197 USP28Q96RU2 1077 aa15.33■□□□□ 0.04
PTPN7-218ENST00000496197 MPHOSPH6Q99547 160 aaKnown RBP15.33■□□□□ 0.04
PTPN7-218ENST00000496197 KCNH7Q9NS40 1196 aa15.33■□□□□ 0.04
PTPN7-218ENST00000496197 DDX25Q9UHL0 483 aaKnown RBP15.33■□□□□ 0.04
PTPN7-218ENST00000496197 CIZ1Q9ULV3 898 aaPredicted RBP15.33■□□□□ 0.04
PTPN7-218ENST00000496197 CNPY2Q9Y2B0 182 aa15.33■□□□□ 0.04
PTPN7-218ENST00000496197 B4DLN1 442 aa15.32■□□□□ 0.04
PTPN7-218ENST00000496197 SPATA31C2B4DYI2 1134 aa15.32■□□□□ 0.04
PTPN7-218ENST00000496197 MSH4O15457 936 aa15.32■□□□□ 0.04
PTPN7-218ENST00000496197 STAM2O75886 525 aa15.32■□□□□ 0.04
PTPN7-218ENST00000496197 SMPD1P17405 629 aa15.32■□□□□ 0.04
PTPN7-218ENST00000496197 ICAM3P32942 547 aa15.32■□□□□ 0.04
PTPN7-218ENST00000496197 TRAPPC10P48553 1259 aa15.32■□□□□ 0.04
PTPN7-218ENST00000496197 IRX5P78411 483 aaPredicted RBP15.32■□□□□ 0.04
PTPN7-218ENST00000496197 NUCB2P80303 420 aa15.32■□□□□ 0.04
PTPN7-218ENST00000496197 DNM1Q05193 864 aaKnown RBP15.32■□□□□ 0.04
PTPN7-218ENST00000496197 ITGB3BPQ13352 177 aaPredicted RBP15.32■□□□□ 0.04
PTPN7-218ENST00000496197 MTFR1Q15390 333 aa15.32■□□□□ 0.04
PTPN7-218ENST00000496197 SLC9C1Q4G0N8 1177 aa15.32■□□□□ 0.04
PTPN7-218ENST00000496197 RILPL1Q5EBL4 403 aa15.32■□□□□ 0.04
PTPN7-218ENST00000496197 ANO1Q5XXA6 986 aa15.32■□□□□ 0.04
PTPN7-218ENST00000496197 HAS1Q92839 578 aa15.32■□□□□ 0.04
PTPN7-218ENST00000496197 GPRASP2Q96D09 838 aa15.32■□□□□ 0.04
PTPN7-218ENST00000496197 AGO4Q9HCK5 861 aaKnown RBP15.32■□□□□ 0.04
PTPN7-218ENST00000496197 NOL7Q9UMY1 257 aaKnown RBP15.32■□□□□ 0.04
PTPN7-218ENST00000496197 FIBPO43427 364 aa15.31■□□□□ 0.04
PTPN7-218ENST00000496197 MYCP01106 439 aaPredicted RBP15.31■□□□□ 0.04
PTPN7-218ENST00000496197 KCNA2P16389 499 aa15.31■□□□□ 0.04
PTPN7-218ENST00000496197 UBA1P22314 1058 aaKnown RBP15.31■□□□□ 0.04
PTPN7-218ENST00000496197 CEBPZQ03701 1054 aaKnown RBP15.31■□□□□ 0.04
PTPN7-218ENST00000496197 NIPA1Q7RTP0 329 aa15.31■□□□□ 0.04
PTPN7-218ENST00000496197 MCOLN1Q9GZU1 580 aa15.31■□□□□ 0.04
PTPN7-218ENST00000496197 KCNMB3Q9NPA1 279 aa15.31■□□□□ 0.04
PTPN7-218ENST00000496197 CHMP5Q9NZZ3 219 aa15.31■□□□□ 0.04
PTPN7-218ENST00000496197 TFIP11Q9UBB9 837 aaKnown RBP15.31■□□□□ 0.04
PTPN7-218ENST00000496197 DDX41Q9UJV9 622 aaKnown RBP15.31■□□□□ 0.04
PTPN7-218ENST00000496197 DHX15O43143 795 aaKnown RBP15.3■□□□□ 0.04
PTPN7-218ENST00000496197 NEMFO60524 1076 aa15.3■□□□□ 0.04
PTPN7-218ENST00000496197 GCFC2P16383 781 aaKnown RBP15.3■□□□□ 0.04
PTPN7-218ENST00000496197 PTPAQ15257 358 aa15.3■□□□□ 0.04
PTPN7-218ENST00000496197 SF3A1Q15459 793 aaKnown RBP15.3■□□□□ 0.04
PTPN7-218ENST00000496197 NLRX1Q86UT6 975 aa15.3■□□□□ 0.04
PTPN7-218ENST00000496197 SCFD2Q8WU76 684 aa15.3■□□□□ 0.04
PTPN7-218ENST00000496197 UNC93B1Q9H1C4 597 aa15.3■□□□□ 0.04
PTPN7-218ENST00000496197 GNEQ9Y223 722 aaKnown RBP15.3■□□□□ 0.04
PTPN7-218ENST00000496197 TXNP10599 105 aaKnown RBP15.29■□□□□ 0.04
PTPN7-218ENST00000496197 CNGA1P29973 690 aa15.29■□□□□ 0.04
PTPN7-218ENST00000496197 SETQ01105 290 aaPredicted RBP15.29■□□□□ 0.04
PTPN7-218ENST00000496197 PTGDRQ13258 359 aa15.29■□□□□ 0.04
PTPN7-218ENST00000496197 PKN2Q16513 984 aaKnown RBP15.29■□□□□ 0.04
PTPN7-218ENST00000496197 IL17AQ16552 155 aa15.29■□□□□ 0.04
PTPN7-218ENST00000496197 GNPTABQ3T906 1256 aa15.29■□□□□ 0.04
PTPN7-218ENST00000496197 MTMR9Q96QG7 549 aa15.29■□□□□ 0.04
PTPN7-218ENST00000496197 ZNF577Q9BSK1 485 aa15.29■□□□□ 0.04
PTPN7-218ENST00000496197 NRBP1Q9UHY1 535 aa15.29■□□□□ 0.04
PTPN7-218ENST00000496197 DDX39AO00148 427 aaKnown RBP15.28■□□□□ 0.04
PTPN7-218ENST00000496197 IPO5O00410 1097 aaKnown RBP15.28■□□□□ 0.04
PTPN7-218ENST00000496197 SEPT4O43236 478 aa15.28■□□□□ 0.04
PTPN7-218ENST00000496197 TNFAIP2Q03169 654 aa15.28■□□□□ 0.04
PTPN7-218ENST00000496197 TTLL4Q14679 1199 aa15.28■□□□□ 0.04
PTPN7-218ENST00000496197 CALCRLQ16602 461 aa15.28■□□□□ 0.04
PTPN7-218ENST00000496197 DUSP28Q4G0W2 176 aa15.28■□□□□ 0.04
PTPN7-218ENST00000496197 COL13A1Q5TAT6 717 aaPredicted RBP15.28■□□□□ 0.04
PTPN7-218ENST00000496197 SLC5A5Q92911 643 aa15.28■□□□□ 0.04
PTPN7-218ENST00000496197 ZNF333Q96JL9 665 aa15.28■□□□□ 0.04
PTPN7-218ENST00000496197 PSMD10O75832 226 aa15.27■□□□□ 0.04
PTPN7-218ENST00000496197 FARP2O94887 1054 aaPredicted RBP15.27■□□□□ 0.04
PTPN7-218ENST00000496197 GGPS1O95749 300 aa15.27■□□□□ 0.04
PTPN7-218ENST00000496197 AKR1A1P14550 325 aa15.27■□□□□ 0.04
PTPN7-218ENST00000496197 NASPP49321 788 aaPredicted RBP15.27■□□□□ 0.04
PTPN7-218ENST00000496197 ATP2C1P98194 919 aaPredicted RBP15.27■□□□□ 0.04
PTPN7-218ENST00000496197 GRIN1Q05586 938 aa15.27■□□□□ 0.04
PTPN7-218ENST00000496197 ARHGAP1Q07960 439 aa15.27■□□□□ 0.04
PTPN7-218ENST00000496197 LHX8Q68G74 356 aa15.27■□□□□ 0.04
PTPN7-218ENST00000496197 IQSEC1Q6DN90 963 aa15.27■□□□□ 0.04
PTPN7-218ENST00000496197 CYFIP1Q7L576 1253 aa15.27■□□□□ 0.04
PTPN7-218ENST00000496197 TNPO1Q92973 898 aaKnown RBP15.27■□□□□ 0.04
PTPN7-218ENST00000496197 ARMC5Q96C12 935 aa15.27■□□□□ 0.04
PTPN7-218ENST00000496197 NAP1L4Q99733 375 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms