RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 FEM1BQ9UK73 627 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 MRPL11Q9Y3B7 192 aaKnown RBP7.75□□□□□ -1.17
USP39-219ENST00000496047 ABCB11O95342 1321 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 A0A087X0B3 334 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 WNT7AO00755 349 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 PLA2G6O60733 806 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 RHOBTB3O94955 611 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 HSPA1AP0DMV8 641 aaKnown RBP7.74□□□□□ -1.17
USP39-219ENST00000496047 HSPA1BP0DMV9 641 aaKnown RBP7.74□□□□□ -1.17
USP39-219ENST00000496047 VEGFAP15692 232 aaPredicted RBP7.74□□□□□ -1.17
USP39-219ENST00000496047 PSMD2Q13200 908 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 CUL4BQ13620 913 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 PTPN14Q15678 1187 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 UBE2SQ16763 222 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 SLC35G1Q2M3R5 365 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 USH1GQ495M9 461 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 TTBK2Q6IQ55 1244 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 BTNL9Q6UXG8 535 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 Q6ZNB5 142 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 SH3BP5LQ7L8J4 393 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 RASGRP2Q7LDG7 609 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 CNGA4Q8IV77 575 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 SULF1Q8IWU6 871 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 ZFPM1Q8IX07 1006 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 TRMT44Q8IYL2 757 aaKnown RBP7.74□□□□□ -1.17
USP39-219ENST00000496047 CACTINQ8WUQ7 758 aaKnown RBP7.74□□□□□ -1.17
USP39-219ENST00000496047 IQCDQ96DY2 449 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 CCDC51Q96ER9 411 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 DHTKD1Q96HY7 919 aaPredicted RBP7.74□□□□□ -1.17
USP39-219ENST00000496047 GMLQ99445 158 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 BLZF1Q9H2G9 400 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 VCPKMTQ9H867 229 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 AS3MTQ9HBK9 375 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 MYOZ2Q9NPC6 264 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 KBTBD4Q9NVX7 518 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 TMEM260Q9NX78 707 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 TCEAL9Q9UHQ7 104 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 PYCARDQ9ULZ3 195 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 PCDHA12Q9UN75 941 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 TMX2Q9Y320 296 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 PAXBP1Q9Y5B6 917 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 CD2APQ9Y5K6 639 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 ITIH6Q6UXX5 1313 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 LOC285556D6RIA3 1793 aa7.74□□□□□ -1.17
USP39-219ENST00000496047 OTOFQ9HC10 1997 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 COL4A5P29400 1685 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 UQCRHLA0A096LP55 91 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 PVALEFA0A1B0GWK0 134 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 ARHGAP6O43182 974 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 TDP2O95551 362 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 UQCRHP07919 91 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 FDX1P10109 184 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 ATP1A3P13637 1013 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 ZNF18P17022 549 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 COL9A1P20849 921 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 DNAJB2P25686 324 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 EEF1GP26641 437 aaKnown RBP7.73□□□□□ -1.17
USP39-219ENST00000496047 SSTR3P32745 418 aaPredicted RBP7.73□□□□□ -1.17
USP39-219ENST00000496047 CAP2P40123 477 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 CCT6AP40227 531 aaKnown RBP7.73□□□□□ -1.17
USP39-219ENST00000496047 USP14P54578 494 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 SETQ01105 290 aaPredicted RBP7.73□□□□□ -1.17
USP39-219ENST00000496047 IL17AQ16552 155 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 CCDC144BQ3MJ40 725 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 KMT5BQ4FZB7 885 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 COBLL1Q53SF7 1204 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 UNC13DQ70J99 1090 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 APOBEC3FQ8IUX4 373 aaKnown RBP7.73□□□□□ -1.17
USP39-219ENST00000496047 CCDC65Q8IXS2 484 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 SAMD3Q8N6K7 520 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 ZNF526Q8TF50 670 aaPredicted RBP7.73□□□□□ -1.17
USP39-219ENST00000496047 LPAR1Q92633 364 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 C7orf25Q9BPX7 421 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 FAM117AQ9C073 453 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 THAP9Q9H5L6 903 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 KCND1Q9NSA2 647 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 NRBP1Q9UHY1 535 aa7.73□□□□□ -1.17
USP39-219ENST00000496047 CNTNAP1P78357 1384 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 A0A1B0GTH6 734 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 KCNJ18B7U540 433 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 AKR1B15C9JRZ8 316 aaPredicted RBP7.72□□□□□ -1.17
USP39-219ENST00000496047 GCOM1H8Y6P7 765 aaPredicted RBP7.72□□□□□ -1.17
USP39-219ENST00000496047 PES1O00541 588 aaKnown RBP7.72□□□□□ -1.17
USP39-219ENST00000496047 DYNC1I1O14576 645 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 N4BP3O15049 544 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 WDR46O15213 610 aaKnown RBP7.72□□□□□ -1.17
USP39-219ENST00000496047 KRT18P05783 430 aaKnown RBP7.72□□□□□ -1.17
USP39-219ENST00000496047 POLR2MP0CAP2 368 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 TNNT1P13805 278 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 KCNA3P22001 575 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 CCNE1P24864 410 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 SREBF1P36956 1147 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 RGS19P49795 217 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 STX17P56962 302 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 ARHGAP4P98171 946 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 FMR1Q06787 632 aaKnown RBP eCLIP7.72□□□□□ -1.17
USP39-219ENST00000496047 CXCL9Q07325 125 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 LRMPQ12912 555 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 KCNJ12Q14500 433 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 Q4G0T1 1027 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms