RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 TJP1Q07157 1748 aa6.98□□□□□ -1.29
GAPVD1-218ENST00000495588 SOS1Q07889 1333 aaPredicted RBP6.98□□□□□ -1.29
GAPVD1-218ENST00000495588 DCDC2CA8MYV0 355 aa6.97□□□□□ -1.29
GAPVD1-218ENST00000495588 PRR33A8MZF0 331 aa6.97□□□□□ -1.29
GAPVD1-218ENST00000495588 FOXD2O60548 495 aaPredicted RBP6.97□□□□□ -1.29
GAPVD1-218ENST00000495588 F13A1P00488 732 aa6.97□□□□□ -1.29
GAPVD1-218ENST00000495588 SNRPA1P09661 255 aaKnown RBP6.97□□□□□ -1.29
GAPVD1-218ENST00000495588 BMP7P18075 431 aa6.97□□□□□ -1.29
GAPVD1-218ENST00000495588 CRKP46108 304 aa6.97□□□□□ -1.29
GAPVD1-218ENST00000495588 RRP1P56182 461 aaKnown RBP6.97□□□□□ -1.29
GAPVD1-218ENST00000495588 MPP2Q14168 576 aa6.97□□□□□ -1.29
GAPVD1-218ENST00000495588 SNAP47Q5SQN1 464 aa6.97□□□□□ -1.29
GAPVD1-218ENST00000495588 ZBTB37Q5TC79 503 aa6.97□□□□□ -1.29
GAPVD1-218ENST00000495588 KRTAP5-3Q6L8H2 238 aa6.97□□□□□ -1.29
GAPVD1-218ENST00000495588 THAP5Q7Z6K1 395 aa6.97□□□□□ -1.29
GAPVD1-218ENST00000495588 MYLIPQ8WY64 445 aa6.97□□□□□ -1.29
GAPVD1-218ENST00000495588 CICQ96RK0 1608 aaPredicted RBP6.97□□□□□ -1.29
GAPVD1-218ENST00000495588 RNF123Q5XPI4 1314 aa6.97□□□□□ -1.29
GAPVD1-218ENST00000495588 LY75O60449 1722 aa6.96□□□□□ -1.29
GAPVD1-218ENST00000495588 ANXA1P04083 346 aa6.96□□□□□ -1.3
GAPVD1-218ENST00000495588 DNAJA1P31689 397 aaKnown RBP6.96□□□□□ -1.3
GAPVD1-218ENST00000495588 RBL2Q08999 1139 aa6.96□□□□□ -1.3
GAPVD1-218ENST00000495588 PROSER3Q2NL68 480 aa6.96□□□□□ -1.3
GAPVD1-218ENST00000495588 CCDC30Q5VVM6 783 aa6.96□□□□□ -1.3
GAPVD1-218ENST00000495588 BNC2Q6ZN30 1099 aaPredicted RBP6.96□□□□□ -1.3
GAPVD1-218ENST00000495588 G2E3Q7L622 706 aa6.96□□□□□ -1.3
GAPVD1-218ENST00000495588 C12orf40Q86WS4 652 aa6.96□□□□□ -1.3
GAPVD1-218ENST00000495588 DNAJC10Q8IXB1 793 aa6.96□□□□□ -1.3
GAPVD1-218ENST00000495588 FRAT1Q92837 279 aaPredicted RBP6.96□□□□□ -1.3
GAPVD1-218ENST00000495588 SMARCC1Q92922 1105 aaPredicted RBP6.96□□□□□ -1.3
GAPVD1-218ENST00000495588 UBP1Q9NZI7 540 aa6.96□□□□□ -1.3
GAPVD1-218ENST00000495588 CHPF2Q9P2E5 772 aa6.96□□□□□ -1.3
GAPVD1-218ENST00000495588 STRIP2Q9ULQ0 834 aa6.96□□□□□ -1.3
GAPVD1-218ENST00000495588 ZNF831Q5JPB2 1677 aa6.96□□□□□ -1.3
GAPVD1-218ENST00000495588 COL5A3P25940 1745 aaPredicted RBP6.96□□□□□ -1.3
GAPVD1-218ENST00000495588 TNS1Q9HBL0 1735 aaKnown RBP6.96□□□□□ -1.3
GAPVD1-218ENST00000495588 SLITRK5O94991 958 aa6.95□□□□□ -1.3
GAPVD1-218ENST00000495588 SYN1P17600 705 aa6.95□□□□□ -1.3
GAPVD1-218ENST00000495588 ATP2B1P20020 1258 aa6.95□□□□□ -1.3
GAPVD1-218ENST00000495588 PIP4K2AP48426 406 aaPredicted RBP6.95□□□□□ -1.3
GAPVD1-218ENST00000495588 IRX6P78412 446 aaPredicted RBP6.95□□□□□ -1.3
GAPVD1-218ENST00000495588 PTPN11Q06124 597 aaPredicted RBP6.95□□□□□ -1.3
GAPVD1-218ENST00000495588 RING1Q06587 406 aa6.95□□□□□ -1.3
GAPVD1-218ENST00000495588 APOBRQ0VD83 1088 aa6.95□□□□□ -1.3
GAPVD1-218ENST00000495588 ITPK1Q13572 414 aa6.95□□□□□ -1.3
GAPVD1-218ENST00000495588 C20orf194Q5TEA3 1177 aa6.95□□□□□ -1.3
GAPVD1-218ENST00000495588 STK31Q9BXU1 1019 aa6.95□□□□□ -1.3
GAPVD1-218ENST00000495588 GINM1Q9NU53 330 aa6.95□□□□□ -1.3
GAPVD1-218ENST00000495588 NOB1Q9ULX3 412 aaKnown RBP6.95□□□□□ -1.3
GAPVD1-218ENST00000495588 TNNQ9UQP3 1299 aa6.95□□□□□ -1.3
GAPVD1-218ENST00000495588 ST14Q9Y5Y6 855 aa6.95□□□□□ -1.3
GAPVD1-218ENST00000495588 KIF16BQ96L93 1317 aa6.95□□□□□ -1.3
GAPVD1-218ENST00000495588 CACNA1FO60840 1977 aa6.95□□□□□ -1.3
GAPVD1-218ENST00000495588 CYP19A1P11511 503 aaPredicted RBP6.94□□□□□ -1.3
GAPVD1-218ENST00000495588 TRIM27P14373 513 aa6.94□□□□□ -1.3
GAPVD1-218ENST00000495588 MYL6BP14649 208 aa6.94□□□□□ -1.3
GAPVD1-218ENST00000495588 CANXP27824 592 aaKnown RBP6.94□□□□□ -1.3
GAPVD1-218ENST00000495588 RPL6Q02878 288 aaKnown RBP6.94□□□□□ -1.3
GAPVD1-218ENST00000495588 SEPT6Q14141 434 aa6.94□□□□□ -1.3
GAPVD1-218ENST00000495588 ZKSCAN2Q63HK3 967 aa6.94□□□□□ -1.3
GAPVD1-218ENST00000495588 LRP10Q7Z4F1 713 aa6.94□□□□□ -1.3
GAPVD1-218ENST00000495588 REC114Q7Z4M0 266 aa6.94□□□□□ -1.3
GAPVD1-218ENST00000495588 REXO1Q8N1G1 1221 aaKnown RBP6.94□□□□□ -1.3
GAPVD1-218ENST00000495588 ZNF507Q8TCN5 953 aa6.94□□□□□ -1.3
GAPVD1-218ENST00000495588 UBE2FQ969M7 185 aa6.94□□□□□ -1.3
GAPVD1-218ENST00000495588 TEX13AQ9BXU3 409 aaPredicted RBP6.94□□□□□ -1.3
GAPVD1-218ENST00000495588 PHAXQ9H814 394 aaKnown RBP6.94□□□□□ -1.3
GAPVD1-218ENST00000495588 DBF4Q9UBU7 674 aaPredicted RBP6.94□□□□□ -1.3
GAPVD1-218ENST00000495588 TMEM59LQ9UK28 342 aa6.94□□□□□ -1.3
GAPVD1-218ENST00000495588 CAPN6Q9Y6Q1 641 aa6.94□□□□□ -1.3
GAPVD1-218ENST00000495588 TAF1LQ8IZX4 1826 aa6.94□□□□□ -1.3
GAPVD1-218ENST00000495588 RREB1Q92766 1687 aa6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 A0A0G2JLL6 359 aaPredicted RBP6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 A1BGP04217 495 aa6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 LMNB1P20700 586 aa6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 HK2P52789 917 aa6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 ZNF746Q6NUN9 644 aaPredicted RBP6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 ATF7IPQ6VMQ6 1270 aa6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 LINC00116Q8NCU8 138 aa6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 FBXO27Q8NI29 283 aa6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 NKD1Q969G9 470 aa6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 MIPEPQ99797 713 aa6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 CHMP4AQ9BY43 222 aa6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 DDX21Q9NR30 783 aaKnown RBP eCLIP6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 ZSWIM5Q9P217 1185 aa6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 CCNL1Q9UK58 526 aaPredicted RBP6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 EFR3BQ9Y2G0 817 aa6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 ZBTB1Q9Y2K1 713 aa6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 MYH14Q7Z406 1995 aaKnown RBP6.93□□□□□ -1.3
GAPVD1-218ENST00000495588 DNAJC25-GNG10A0A024R161 153 aa6.92□□□□□ -1.3
GAPVD1-218ENST00000495588 GFRA2O00451 464 aa6.92□□□□□ -1.3
GAPVD1-218ENST00000495588 IPO8O15397 1037 aaKnown RBP6.92□□□□□ -1.3
GAPVD1-218ENST00000495588 STARD3NLO95772 234 aa6.92□□□□□ -1.3
GAPVD1-218ENST00000495588 CRKLP46109 303 aaKnown RBP6.92□□□□□ -1.3
GAPVD1-218ENST00000495588 NASPP49321 788 aaPredicted RBP6.92□□□□□ -1.3
GAPVD1-218ENST00000495588 ERVFC1P60507 584 aa6.92□□□□□ -1.3
GAPVD1-218ENST00000495588 AIMP1Q12904 312 aaKnown RBP6.92□□□□□ -1.3
GAPVD1-218ENST00000495588 NFIXQ14938 502 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms