RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 PPFIA4O75335 1185 aa17.11■□□□□ 0.33
PTPN18-216ENST00000495400 CXCL10P02778 98 aa17.11■□□□□ 0.33
PTPN18-216ENST00000495400 POLR2MP0CAP2 368 aa17.11■□□□□ 0.33
PTPN18-216ENST00000495400 ZNF286BP0CG31 522 aa17.11■□□□□ 0.33
PTPN18-216ENST00000495400 HOXD8P13378 290 aaPredicted RBP17.11■□□□□ 0.33
PTPN18-216ENST00000495400 WDR5P61964 334 aaKnown RBP17.11■□□□□ 0.33
PTPN18-216ENST00000495400 PTH1RQ03431 593 aa17.11■□□□□ 0.33
PTPN18-216ENST00000495400 TAP1Q03518 808 aa17.11■□□□□ 0.33
PTPN18-216ENST00000495400 SLC35G1Q2M3R5 365 aa17.11■□□□□ 0.33
PTPN18-216ENST00000495400 CELF3Q5SZQ8 465 aaKnown RBP17.11■□□□□ 0.33
PTPN18-216ENST00000495400 ADAMTS19Q8TE59 1207 aa17.11■□□□□ 0.33
PTPN18-216ENST00000495400 SPATA33Q96N06 139 aa17.11■□□□□ 0.33
PTPN18-216ENST00000495400 TCF20Q9UGU0 1960 aaKnown RBP17.11■□□□□ 0.33
PTPN18-216ENST00000495400 NCOR1O75376 2440 aa17.1■□□□□ 0.33
PTPN18-216ENST00000495400 EPOPA6NHQ4 379 aa17.1■□□□□ 0.33
PTPN18-216ENST00000495400 NBNO60934 754 aa17.1■□□□□ 0.33
PTPN18-216ENST00000495400 ARHGEF15O94989 841 aa17.1■□□□□ 0.33
PTPN18-216ENST00000495400 GGPS1O95749 300 aa17.1■□□□□ 0.33
PTPN18-216ENST00000495400 TGFB3P10600 412 aa17.1■□□□□ 0.33
PTPN18-216ENST00000495400 CHMLP26374 656 aa17.1■□□□□ 0.33
PTPN18-216ENST00000495400 CCND2P30279 289 aa17.1■□□□□ 0.33
PTPN18-216ENST00000495400 WTAPQ15007 396 aa17.1■□□□□ 0.33
PTPN18-216ENST00000495400 HSDL1Q3SXM5 330 aa17.1■□□□□ 0.33
PTPN18-216ENST00000495400 NCOA7Q8NI08 942 aa17.1■□□□□ 0.33
PTPN18-216ENST00000495400 IL31RAQ8NI17 732 aa17.1■□□□□ 0.33
PTPN18-216ENST00000495400 ARNTL2Q8WYA1 636 aa17.1■□□□□ 0.33
PTPN18-216ENST00000495400 PNMA6FA0A0J9YX94 578 aa17.09■□□□□ 0.33
PTPN18-216ENST00000495400 ABHD14A-ACY1A0A1B0GW23 586 aa17.09■□□□□ 0.33
PTPN18-216ENST00000495400 SORBS3O60504 671 aa17.09■□□□□ 0.33
PTPN18-216ENST00000495400 ZNF200P98182 395 aaPredicted RBP17.09■□□□□ 0.33
PTPN18-216ENST00000495400 SP2Q02086 613 aa17.09■□□□□ 0.33
PTPN18-216ENST00000495400 SART3Q15020 963 aaKnown RBP17.09■□□□□ 0.33
PTPN18-216ENST00000495400 SKIV2LQ15477 1246 aaKnown RBP17.09■□□□□ 0.33
PTPN18-216ENST00000495400 TRIM71Q2Q1W2 868 aaKnown RBP17.09■□□□□ 0.33
PTPN18-216ENST00000495400 RALYLQ86SE5 291 aaKnown RBP17.09■□□□□ 0.33
PTPN18-216ENST00000495400 FCHSD1Q86WN1 690 aa17.09■□□□□ 0.33
PTPN18-216ENST00000495400 UHRF1Q96T88 793 aaPredicted RBP17.09■□□□□ 0.33
PTPN18-216ENST00000495400 ZBED2Q9BTP6 218 aa17.09■□□□□ 0.33
PTPN18-216ENST00000495400 MLXIPQ9HAP2 919 aa17.09■□□□□ 0.33
PTPN18-216ENST00000495400 SENP2Q9HC62 589 aa17.09■□□□□ 0.33
PTPN18-216ENST00000495400 TRANK1O15050 2925 aa17.08■□□□□ 0.33
PTPN18-216ENST00000495400 E7EWF7 191 aa17.08■□□□□ 0.32
PTPN18-216ENST00000495400 CYTH3O43739 400 aa17.08■□□□□ 0.32
PTPN18-216ENST00000495400 EFCAB14O75071 495 aa17.08■□□□□ 0.32
PTPN18-216ENST00000495400 UBA1P22314 1058 aaKnown RBP17.08■□□□□ 0.32
PTPN18-216ENST00000495400 DEFB103AP81534 67 aa17.08■□□□□ 0.32
PTPN18-216ENST00000495400 TROAPQ12815 778 aa17.08■□□□□ 0.32
PTPN18-216ENST00000495400 AAK1Q2M2I8 961 aa17.08■□□□□ 0.32
PTPN18-216ENST00000495400 TCTN1Q2MV58 587 aa17.08■□□□□ 0.32
PTPN18-216ENST00000495400 ZNF618Q5T7W0 954 aa17.08■□□□□ 0.32
PTPN18-216ENST00000495400 TRAF7Q6Q0C0 670 aa17.08■□□□□ 0.32
PTPN18-216ENST00000495400 GPKOWQ92917 476 aaPredicted RBP eCLIP17.08■□□□□ 0.32
PTPN18-216ENST00000495400 ZFP91Q96JP5 570 aaPredicted RBP17.08■□□□□ 0.32
PTPN18-216ENST00000495400 BMP1P13497 986 aa17.07■□□□□ 0.32
PTPN18-216ENST00000495400 GRB10Q13322 594 aa17.07■□□□□ 0.32
PTPN18-216ENST00000495400 IKBKEQ14164 716 aa17.07■□□□□ 0.32
PTPN18-216ENST00000495400 HIC1Q14526 733 aa17.07■□□□□ 0.32
PTPN18-216ENST00000495400 TMCO2Q7Z6W1 182 aaPredicted RBP17.07■□□□□ 0.32
PTPN18-216ENST00000495400 CATIPQ7Z7H3 387 aa17.07■□□□□ 0.32
PTPN18-216ENST00000495400 WNT8BQ93098 351 aa17.07■□□□□ 0.32
PTPN18-216ENST00000495400 C16orf70Q9BSU1 422 aa17.07■□□□□ 0.32
PTPN18-216ENST00000495400 SUPT16HQ9Y5B9 1047 aaKnown RBP17.07■□□□□ 0.32
PTPN18-216ENST00000495400 TAF6LQ9Y6J9 622 aa17.07■□□□□ 0.32
PTPN18-216ENST00000495400 DOCK5Q9H7D0 1870 aa17.06■□□□□ 0.32
PTPN18-216ENST00000495400 LCHNA4D1U4 455 aa17.06■□□□□ 0.32
PTPN18-216ENST00000495400 SGSM2O43147 1006 aa17.06■□□□□ 0.32
PTPN18-216ENST00000495400 TFF2Q03403 129 aa17.06■□□□□ 0.32
PTPN18-216ENST00000495400 GNPTABQ3T906 1256 aa17.06■□□□□ 0.32
PTPN18-216ENST00000495400 KRT40Q6A162 431 aa17.06■□□□□ 0.32
PTPN18-216ENST00000495400 IGDCC4Q8TDY8 1250 aa17.06■□□□□ 0.32
PTPN18-216ENST00000495400 RAD9AQ99638 391 aa17.06■□□□□ 0.32
PTPN18-216ENST00000495400 COG5Q9UP83 839 aa17.06■□□□□ 0.32
PTPN18-216ENST00000495400 COL4A4P53420 1690 aaPredicted RBP17.06■□□□□ 0.32
PTPN18-216ENST00000495400 FRMPD4Q14CM0 1322 aa17.05■□□□□ 0.32
PTPN18-216ENST00000495400 MICAL3Q7RTP6 2002 aa17.05■□□□□ 0.32
PTPN18-216ENST00000495400 C17orf102A2RUQ5 167 aa17.05■□□□□ 0.32
PTPN18-216ENST00000495400 H3BRB1 525 aa17.05■□□□□ 0.32
PTPN18-216ENST00000495400 LGR5O75473 907 aa17.05■□□□□ 0.32
PTPN18-216ENST00000495400 STAM2O75886 525 aa17.05■□□□□ 0.32
PTPN18-216ENST00000495400 GJB5O95377 273 aa17.05■□□□□ 0.32
PTPN18-216ENST00000495400 ICAM3P32942 547 aa17.05■□□□□ 0.32
PTPN18-216ENST00000495400 ANTXR2P58335 489 aa17.05■□□□□ 0.32
PTPN18-216ENST00000495400 MBTPS1Q14703 1052 aa17.05■□□□□ 0.32
PTPN18-216ENST00000495400 SPRED2Q7Z698 418 aa17.05■□□□□ 0.32
PTPN18-216ENST00000495400 SERINC5Q86VE9 423 aa17.05■□□□□ 0.32
PTPN18-216ENST00000495400 MAP4K1Q92918 833 aa17.05■□□□□ 0.32
PTPN18-216ENST00000495400 TUT1Q9H6E5 874 aaKnown RBP17.05■□□□□ 0.32
PTPN18-216ENST00000495400 BCAS3Q9H6U6 928 aa17.05■□□□□ 0.32
PTPN18-216ENST00000495400 EMSYQ7Z589 1322 aa17.04■□□□□ 0.32
PTPN18-216ENST00000495400 RSPH10B2B2RC85 870 aa17.04■□□□□ 0.32
PTPN18-216ENST00000495400 LPXNO60711 386 aa17.04■□□□□ 0.32
PTPN18-216ENST00000495400 LGALS2P05162 132 aa17.04■□□□□ 0.32
PTPN18-216ENST00000495400 RSPH10BP0C881 870 aa17.04■□□□□ 0.32
PTPN18-216ENST00000495400 THPOP40225 353 aa17.04■□□□□ 0.32
PTPN18-216ENST00000495400 MRPS9P82933 396 aaKnown RBP17.04■□□□□ 0.32
PTPN18-216ENST00000495400 NEDD9Q14511 834 aa17.04■□□□□ 0.32
PTPN18-216ENST00000495400 MB21D2Q8IYB1 491 aaPredicted RBP17.04■□□□□ 0.32
PTPN18-216ENST00000495400 PIBF1Q8WXW3 757 aa17.04■□□□□ 0.32
PTPN18-216ENST00000495400 ATP6V0A1Q93050 837 aa17.04■□□□□ 0.32
PTPN18-216ENST00000495400 INPP4AQ96PE3 977 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms