RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 NEDD9Q14511 834 aa13.77□□□□□ -0.21
CSNK1E-213ENST00000495232 KCNA10Q16322 511 aa13.77□□□□□ -0.21
CSNK1E-213ENST00000495232 CEP55Q53EZ4 464 aa13.77□□□□□ -0.21
CSNK1E-213ENST00000495232 TMEM63BQ5T3F8 832 aa13.77□□□□□ -0.21
CSNK1E-213ENST00000495232 KRT25Q7Z3Z0 450 aa13.77□□□□□ -0.21
CSNK1E-213ENST00000495232 HSCBQ8IWL3 235 aa13.77□□□□□ -0.21
CSNK1E-213ENST00000495232 GIMAP8Q8ND71 665 aaPredicted RBP13.77□□□□□ -0.21
CSNK1E-213ENST00000495232 KLHDC9Q8NEP7 349 aa13.77□□□□□ -0.21
CSNK1E-213ENST00000495232 DIS3LQ8TF46 1054 aaKnown RBP13.77□□□□□ -0.21
CSNK1E-213ENST00000495232 COPS5Q92905 334 aa13.77□□□□□ -0.21
CSNK1E-213ENST00000495232 VTI1AQ96AJ9 217 aa13.77□□□□□ -0.21
CSNK1E-213ENST00000495232 MXRA8Q9BRK3 442 aa13.77□□□□□ -0.21
CSNK1E-213ENST00000495232 GJB4Q9NTQ9 266 aa13.77□□□□□ -0.21
CSNK1E-213ENST00000495232 SMC3Q9UQE7 1217 aa13.77□□□□□ -0.21
CSNK1E-213ENST00000495232 DNAH12Q6ZR08 3092 aa13.77□□□□□ -0.21
CSNK1E-213ENST00000495232 SPATA31C2B4DYI2 1134 aa13.76□□□□□ -0.21
CSNK1E-213ENST00000495232 ADAMTS3O15072 1205 aa13.76□□□□□ -0.21
CSNK1E-213ENST00000495232 GGPS1O95749 300 aa13.76□□□□□ -0.21
CSNK1E-213ENST00000495232 MMP1P03956 469 aa13.76□□□□□ -0.21
CSNK1E-213ENST00000495232 CYP3A4P08684 503 aa13.76□□□□□ -0.21
CSNK1E-213ENST00000495232 USP11P51784 963 aa13.76□□□□□ -0.21
CSNK1E-213ENST00000495232 ACLYP53396 1101 aa13.76□□□□□ -0.21
CSNK1E-213ENST00000495232 GUCY1B3Q02153 619 aa13.76□□□□□ -0.21
CSNK1E-213ENST00000495232 GNL2Q13823 731 aaKnown RBP13.76□□□□□ -0.21
CSNK1E-213ENST00000495232 NONOQ15233 471 aaKnown RBP eCLIP13.76□□□□□ -0.21
CSNK1E-213ENST00000495232 KRT40Q6A162 431 aa13.76□□□□□ -0.21
CSNK1E-213ENST00000495232 TBCKQ8TEA7 893 aa13.76□□□□□ -0.21
CSNK1E-213ENST00000495232 FERMT2Q96AC1 680 aa13.76□□□□□ -0.21
CSNK1E-213ENST00000495232 GLT1D1Q96MS3 346 aa13.76□□□□□ -0.21
CSNK1E-213ENST00000495232 JADE2Q9NQC1 790 aa13.76□□□□□ -0.21
CSNK1E-213ENST00000495232 POLR3EQ9NVU0 708 aa13.76□□□□□ -0.21
CSNK1E-213ENST00000495232 UBIAD1Q9Y5Z9 338 aa13.76□□□□□ -0.21
CSNK1E-213ENST00000495232 MYADML2A6NDP7 307 aa13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 K7ELQ4 463 aaPredicted RBP13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 NOP56O00567 594 aaKnown RBP13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 SORBS3O60504 671 aa13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 KPNA6O60684 536 aa13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 CABYRO75952 493 aa13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 ASGR1P07306 291 aa13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 MYL3P08590 195 aa13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 ITGB5P18084 799 aa13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 UBA1P22314 1058 aaKnown RBP13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 PTGS1P23219 599 aa13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 GJB2P29033 226 aa13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 MNX1P50219 401 aaPredicted RBP13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 NKX3-2P78367 333 aa13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 SETQ01105 290 aaPredicted RBP13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 CELF3Q5SZQ8 465 aaKnown RBP13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 UBE2Q1Q7Z7E8 422 aa13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 DPF3Q92784 378 aa13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 SPATA33Q96N06 139 aa13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 SENP7Q9BQF6 1050 aa13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 STARD7Q9NQZ5 370 aa13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 KCNH7Q9NS40 1196 aa13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 PHF24Q9UPV7 400 aa13.75□□□□□ -0.21
CSNK1E-213ENST00000495232 MYH7BA7E2Y1 1941 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 A0A1W2PQ45 241 aaPredicted RBP13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 A0A1W2PQY0 241 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 A6NJR5 290 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 H3BQV1 296 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 M0R2N6 131 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 HSP90AA1P07900 732 aaKnown RBP13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 COL6A1P12109 1028 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 ATN1P54259 1190 aaPredicted RBP13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 IRX5P78411 483 aaPredicted RBP13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 SP2Q02086 613 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 ARHGAP1Q07960 439 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 NPY5RQ15761 445 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 DGKDQ16760 1214 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 MYSM1Q5VVJ2 828 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 METTL7BQ6UX53 244 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 PIK3AP1Q6ZUJ8 805 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 CYFIP1Q7L576 1253 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 NIPA1Q7RTP0 329 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 PLA2G4DQ86XP0 818 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 DIS3L2Q8IYB7 885 aaKnown RBP13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 FBXO18Q8NFZ0 1043 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 CYP2W1Q8TAV3 490 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 OXER1Q8TDS5 423 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 AFG1LQ8WV93 481 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 SNX21Q969T3 373 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 EMID1Q96A84 441 aaPredicted RBP13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 NAP1L4Q99733 375 aaKnown RBP13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 SDF4Q9BRK5 362 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 PKD2L1Q9P0L9 805 aa13.74□□□□□ -0.21
CSNK1E-213ENST00000495232 BTBD18B2RXH4 712 aa13.73□□□□□ -0.21
CSNK1E-213ENST00000495232 FAM86B1E9PN63 330 aa13.73□□□□□ -0.21
CSNK1E-213ENST00000495232 MEIS1O00470 390 aa13.73□□□□□ -0.21
CSNK1E-213ENST00000495232 CTAGE5O15320 804 aa13.73□□□□□ -0.21
CSNK1E-213ENST00000495232 FAM86B2P0C5J1 330 aa13.73□□□□□ -0.21
CSNK1E-213ENST00000495232 SEMA3FQ13275 785 aa13.73□□□□□ -0.21
CSNK1E-213ENST00000495232 NR5A1Q13285 461 aa13.73□□□□□ -0.21
CSNK1E-213ENST00000495232 CUL4AQ13619 759 aa13.73□□□□□ -0.21
CSNK1E-213ENST00000495232 INF2Q27J81 1249 aa13.73□□□□□ -0.21
CSNK1E-213ENST00000495232 PRR16Q569H4 304 aa13.73□□□□□ -0.21
CSNK1E-213ENST00000495232 CCSAPQ6IQ19 270 aaPredicted RBP13.73□□□□□ -0.21
CSNK1E-213ENST00000495232 CXCL17Q6UXB2 119 aa13.73□□□□□ -0.21
CSNK1E-213ENST00000495232 PPTC7Q8NI37 304 aa13.73□□□□□ -0.21
CSNK1E-213ENST00000495232 CRYGNQ8WXF5 182 aa13.73□□□□□ -0.21
CSNK1E-213ENST00000495232 TCEAL9Q9UHQ7 104 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms