RNA–Protein interactions for RNA: ENST00000494511.5

PMP22-206, Transcript of peripheral myelin protein 22, humanhuman

TSL 1 (best) BASIC

Gene PMP22, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-206ENST00000494511 NFRKBQ6P4R8 1299 aa16.6■□□□□ 0.25
PMP22-206ENST00000494511 KCNV1Q6PIU1 500 aa16.6■□□□□ 0.25
PMP22-206ENST00000494511 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.6■□□□□ 0.25
PMP22-206ENST00000494511 PPTC7Q8NI37 304 aa16.6■□□□□ 0.25
PMP22-206ENST00000494511 KAT2BQ92831 832 aa16.6■□□□□ 0.25
PMP22-206ENST00000494511 EMID1Q96A84 441 aaPredicted RBP16.6■□□□□ 0.25
PMP22-206ENST00000494511 SCLYQ96I15 445 aa16.6■□□□□ 0.25
PMP22-206ENST00000494511 FAM161BQ96MY7 647 aa16.6■□□□□ 0.25
PMP22-206ENST00000494511 SPATA33Q96N06 139 aa16.6■□□□□ 0.25
PMP22-206ENST00000494511 ALG1Q9BT22 464 aa16.6■□□□□ 0.25
PMP22-206ENST00000494511 FAM217BQ9NTX9 383 aaPredicted RBP16.6■□□□□ 0.25
PMP22-206ENST00000494511 V9GY48 417 aaPredicted RBP16.6■□□□□ 0.25
PMP22-206ENST00000494511 FRMPD4Q14CM0 1322 aa16.6■□□□□ 0.25
PMP22-206ENST00000494511 SUPT20HL2P0C7V6 817 aa16.59■□□□□ 0.25
PMP22-206ENST00000494511 RPS6KB1P23443 525 aa16.59■□□□□ 0.25
PMP22-206ENST00000494511 ADD1P35611 737 aaKnown RBP16.59■□□□□ 0.25
PMP22-206ENST00000494511 METAP2P50579 478 aaKnown RBP eCLIP16.59■□□□□ 0.25
PMP22-206ENST00000494511 FUT2Q10981 343 aa16.59■□□□□ 0.25
PMP22-206ENST00000494511 HSDL1Q3SXM5 330 aa16.59■□□□□ 0.25
PMP22-206ENST00000494511 GNPTABQ3T906 1256 aa16.59■□□□□ 0.25
PMP22-206ENST00000494511 TMEM240Q5SV17 173 aa16.59■□□□□ 0.25
PMP22-206ENST00000494511 ZNF365Q70YC5 407 aa16.59■□□□□ 0.25
PMP22-206ENST00000494511 WNT8AQ9H1J5 351 aa16.59■□□□□ 0.25
PMP22-206ENST00000494511 MLXIPQ9HAP2 919 aa16.59■□□□□ 0.25
PMP22-206ENST00000494511 IL23AQ9NPF7 189 aa16.59■□□□□ 0.25
PMP22-206ENST00000494511 NOD1Q9Y239 953 aa16.59■□□□□ 0.25
PMP22-206ENST00000494511 TRIP12Q14669 1992 aaPredicted RBP16.58■□□□□ 0.25
PMP22-206ENST00000494511 TGFB3P10600 412 aa16.58■□□□□ 0.24
PMP22-206ENST00000494511 PSMA5P28066 241 aa16.58■□□□□ 0.24
PMP22-206ENST00000494511 PSEN2P49810 448 aa16.58■□□□□ 0.24
PMP22-206ENST00000494511 NAPAP54920 295 aa16.58■□□□□ 0.24
PMP22-206ENST00000494511 SEMA3FQ13275 785 aa16.58■□□□□ 0.24
PMP22-206ENST00000494511 ERICH6BQ5W0A0 696 aa16.58■□□□□ 0.24
PMP22-206ENST00000494511 PCNX4Q63HM2 1172 aa16.58■□□□□ 0.24
PMP22-206ENST00000494511 TYW1BQ6NUM6 668 aa16.58■□□□□ 0.24
PMP22-206ENST00000494511 INPP4AQ96PE3 977 aaPredicted RBP16.58■□□□□ 0.24
PMP22-206ENST00000494511 SCN5AQ14524 2016 aa16.58■□□□□ 0.24
PMP22-206ENST00000494511 VCANP13611 3396 aa16.58■□□□□ 0.24
PMP22-206ENST00000494511 CDH23Q9H251 3354 aa16.58■□□□□ 0.24
PMP22-206ENST00000494511 SPDYE3A6NKU9 549 aa16.57■□□□□ 0.24
PMP22-206ENST00000494511 SPATA31C2B4DYI2 1134 aa16.57■□□□□ 0.24
PMP22-206ENST00000494511 STAM2O75886 525 aa16.57■□□□□ 0.24
PMP22-206ENST00000494511 PTPN11Q06124 597 aaPredicted RBP16.57■□□□□ 0.24
PMP22-206ENST00000494511 MFSD10Q14728 455 aa16.57■□□□□ 0.24
PMP22-206ENST00000494511 PTGISQ16647 500 aa16.57■□□□□ 0.24
PMP22-206ENST00000494511 GDF6Q6KF10 455 aaPredicted RBP16.57■□□□□ 0.24
PMP22-206ENST00000494511 CYFIP1Q7L576 1253 aa16.57■□□□□ 0.24
PMP22-206ENST00000494511 USP26Q9BXU7 913 aa16.57■□□□□ 0.24
PMP22-206ENST00000494511 PCDHA6Q9UN73 950 aa16.57■□□□□ 0.24
PMP22-206ENST00000494511 PCDHA8Q9Y5H6 950 aa16.57■□□□□ 0.24
PMP22-206ENST00000494511 PRUNE2Q8WUY3 3088 aa16.57■□□□□ 0.24
PMP22-206ENST00000494511 STXBP3O00186 592 aa16.56■□□□□ 0.24
PMP22-206ENST00000494511 FIBPO43427 364 aa16.56■□□□□ 0.24
PMP22-206ENST00000494511 PPFIA3O75145 1194 aa16.56■□□□□ 0.24
PMP22-206ENST00000494511 PPFIA4O75335 1185 aa16.56■□□□□ 0.24
PMP22-206ENST00000494511 ICAM3P32942 547 aa16.56■□□□□ 0.24
PMP22-206ENST00000494511 SMAD3P84022 425 aaKnown RBP16.56■□□□□ 0.24
PMP22-206ENST00000494511 SP4Q02446 784 aa16.56■□□□□ 0.24
PMP22-206ENST00000494511 KIAA0753Q2KHM9 967 aa16.56■□□□□ 0.24
PMP22-206ENST00000494511 ZNF697Q5TEC3 545 aa16.56■□□□□ 0.24
PMP22-206ENST00000494511 XRRA1Q6P2D8 792 aa16.56■□□□□ 0.24
PMP22-206ENST00000494511 PSRC1Q6PGN9 363 aaPredicted RBP16.56■□□□□ 0.24
PMP22-206ENST00000494511 C7orf31Q8N865 590 aa16.56■□□□□ 0.24
PMP22-206ENST00000494511 PGBD1Q96JS3 809 aa16.56■□□□□ 0.24
PMP22-206ENST00000494511 HDAC6Q9UBN7 1215 aa16.56■□□□□ 0.24
PMP22-206ENST00000494511 TELO2Q9Y4R8 837 aa16.56■□□□□ 0.24
PMP22-206ENST00000494511 CHD9Q3L8U1 2897 aa16.56■□□□□ 0.24
PMP22-206ENST00000494511 MYO9BQ13459 2157 aa16.55■□□□□ 0.24
PMP22-206ENST00000494511 GRXCR1A8MXD5 290 aa16.55■□□□□ 0.24
PMP22-206ENST00000494511 NOP56O00567 594 aaKnown RBP16.55■□□□□ 0.24
PMP22-206ENST00000494511 F2P00734 622 aa16.55■□□□□ 0.24
PMP22-206ENST00000494511 FGBP02675 491 aa16.55■□□□□ 0.24
PMP22-206ENST00000494511 HOXD8P13378 290 aaPredicted RBP16.55■□□□□ 0.24
PMP22-206ENST00000494511 ADCY7P51828 1080 aa16.55■□□□□ 0.24
PMP22-206ENST00000494511 RCAN1P53805 252 aa16.55■□□□□ 0.24
PMP22-206ENST00000494511 NEDD9Q14511 834 aa16.55■□□□□ 0.24
PMP22-206ENST00000494511 OTOP2Q7RTS6 562 aa16.55■□□□□ 0.24
PMP22-206ENST00000494511 DEFB128Q7Z7B8 93 aa16.55■□□□□ 0.24
PMP22-206ENST00000494511 NLRX1Q86UT6 975 aa16.55■□□□□ 0.24
PMP22-206ENST00000494511 RETREG2Q8NC44 543 aa16.55■□□□□ 0.24
PMP22-206ENST00000494511 KATNAL1Q9BW62 490 aa16.55■□□□□ 0.24
PMP22-206ENST00000494511 PKD2L1Q9P0L9 805 aa16.55■□□□□ 0.24
PMP22-206ENST00000494511 CXXC1Q9P0U4 656 aaPredicted RBP16.55■□□□□ 0.24
PMP22-206ENST00000494511 SPTBN5Q9NRC6 3674 aaKnown RBP16.55■□□□□ 0.24
PMP22-206ENST00000494511 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.54■□□□□ 0.24
PMP22-206ENST00000494511 CCDC196A0A1B0GTZ2 297 aa16.54■□□□□ 0.24
PMP22-206ENST00000494511 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.54■□□□□ 0.24
PMP22-206ENST00000494511 SMCO2A6NFE2 343 aa16.54■□□□□ 0.24
PMP22-206ENST00000494511 HAS3O00219 553 aa16.54■□□□□ 0.24
PMP22-206ENST00000494511 CCT2P78371 535 aaKnown RBP16.54■□□□□ 0.24
PMP22-206ENST00000494511 ZNF200P98182 395 aaPredicted RBP16.54■□□□□ 0.24
PMP22-206ENST00000494511 PPP1R18Q6NYC8 613 aa16.54■□□□□ 0.24
PMP22-206ENST00000494511 METTL7BQ6UX53 244 aa16.54■□□□□ 0.24
PMP22-206ENST00000494511 RUFY3Q7L099 469 aa16.54■□□□□ 0.24
PMP22-206ENST00000494511 SESTD1Q86VW0 696 aa16.54■□□□□ 0.24
PMP22-206ENST00000494511 RPUSD2Q8IZ73 545 aaKnown RBP16.54■□□□□ 0.24
PMP22-206ENST00000494511 PHKBQ93100 1093 aa16.54■□□□□ 0.24
PMP22-206ENST00000494511 CTAGE1Q96RT6 745 aa16.54■□□□□ 0.24
PMP22-206ENST00000494511 LARP6Q9BRS8 491 aaKnown RBP16.54■□□□□ 0.24
PMP22-206ENST00000494511 UPF3BQ9BZI7 483 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms