RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 NBNO60934 754 aa11.18□□□□□ -0.62
UBR4-216ENST00000494503 PARNO95453 639 aaKnown RBP11.18□□□□□ -0.62
UBR4-216ENST00000494503 BMP1P13497 986 aa11.18□□□□□ -0.62
UBR4-216ENST00000494503 CCND2P30279 289 aa11.18□□□□□ -0.62
UBR4-216ENST00000494503 SP4Q02446 784 aa11.18□□□□□ -0.62
UBR4-216ENST00000494503 PTK7Q13308 1070 aa11.18□□□□□ -0.62
UBR4-216ENST00000494503 ZNF618Q5T7W0 954 aa11.18□□□□□ -0.62
UBR4-216ENST00000494503 EP400NLQ6ZTU2 488 aa11.18□□□□□ -0.62
UBR4-216ENST00000494503 SESTD1Q86VW0 696 aa11.18□□□□□ -0.62
UBR4-216ENST00000494503 DSCC1Q9BVC3 393 aa11.18□□□□□ -0.62
UBR4-216ENST00000494503 C1QTNF1Q9BXJ1 281 aa11.18□□□□□ -0.62
UBR4-216ENST00000494503 MICAL3Q7RTP6 2002 aa11.18□□□□□ -0.62
UBR4-216ENST00000494503 ABHD14A-ACY1A0A1B0GW23 586 aa11.17□□□□□ -0.62
UBR4-216ENST00000494503 C17orf102A2RUQ5 167 aa11.17□□□□□ -0.62
UBR4-216ENST00000494503 GCOM1H8Y6P7 765 aaPredicted RBP11.17□□□□□ -0.62
UBR4-216ENST00000494503 ZBTB5O15062 677 aa11.17□□□□□ -0.62
UBR4-216ENST00000494503 F2P00734 622 aa11.17□□□□□ -0.62
UBR4-216ENST00000494503 AMHP03971 560 aa11.17□□□□□ -0.62
UBR4-216ENST00000494503 CTSHP09668 335 aa11.17□□□□□ -0.62
UBR4-216ENST00000494503 POLR2MP0CAP2 368 aa11.17□□□□□ -0.62
UBR4-216ENST00000494503 NT5C2P49902 561 aa11.17□□□□□ -0.62
UBR4-216ENST00000494503 NUCB1Q02818 461 aa11.17□□□□□ -0.62
UBR4-216ENST00000494503 KCNV1Q6PIU1 500 aa11.17□□□□□ -0.62
UBR4-216ENST00000494503 RALYLQ86SE5 291 aaKnown RBP11.17□□□□□ -0.62
UBR4-216ENST00000494503 SMC5Q8IY18 1101 aa11.17□□□□□ -0.62
UBR4-216ENST00000494503 ATP6V0A1Q93050 837 aa11.17□□□□□ -0.62
UBR4-216ENST00000494503 FAM122AQ96E09 287 aa11.17□□□□□ -0.62
UBR4-216ENST00000494503 TGS1Q96RS0 853 aaKnown RBP11.17□□□□□ -0.62
UBR4-216ENST00000494503 RAD9AQ99638 391 aa11.17□□□□□ -0.62
UBR4-216ENST00000494503 PDCD2LQ9BRP1 358 aa11.17□□□□□ -0.62
UBR4-216ENST00000494503 EMSYQ7Z589 1322 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 RSPH10B2B2RC85 870 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 IFIT3O14879 490 aaKnown RBP11.16□□□□□ -0.62
UBR4-216ENST00000494503 EFCAB14O75071 495 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 LGR5O75473 907 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 UPP2O95045 317 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 GJB5O95377 273 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 IGHDP01880 384 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 RSPH10BP0C881 870 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 UBA1P22314 1058 aaKnown RBP11.16□□□□□ -0.62
UBR4-216ENST00000494503 HSD17B4P51659 736 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 PGM5Q15124 567 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 HSDL1Q3SXM5 330 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 CELF3Q5SZQ8 465 aaKnown RBP11.16□□□□□ -0.62
UBR4-216ENST00000494503 CYB5R4Q7L1T6 521 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 FBXO22Q8NEZ5 403 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 IL31RAQ8NI17 732 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 ANKS1AQ92625 1134 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 WNT8BQ93098 351 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 EMID1Q96A84 441 aaPredicted RBP11.16□□□□□ -0.62
UBR4-216ENST00000494503 CTAGE1Q96RT6 745 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 PIGSQ96S52 555 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 YME1L1Q96TA2 773 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 MAF1Q9H063 256 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 HCN4Q9Y3Q4 1203 aa11.16□□□□□ -0.62
UBR4-216ENST00000494503 LINC01553A4QN01 128 aa11.15□□□□□ -0.62
UBR4-216ENST00000494503 PPP1R11O60927 126 aaPredicted RBP11.15□□□□□ -0.62
UBR4-216ENST00000494503 PPFIA4O75335 1185 aa11.15□□□□□ -0.62
UBR4-216ENST00000494503 CSPG5O95196 566 aa11.15□□□□□ -0.62
UBR4-216ENST00000494503 CXCL10P02778 98 aa11.15□□□□□ -0.62
UBR4-216ENST00000494503 POU3F3P20264 500 aaPredicted RBP11.15□□□□□ -0.62
UBR4-216ENST00000494503 KCNA5P22460 613 aa11.15□□□□□ -0.62
UBR4-216ENST00000494503 SSTR3P32745 418 aaPredicted RBP11.15□□□□□ -0.62
UBR4-216ENST00000494503 TRAF1Q13077 416 aa11.15□□□□□ -0.62
UBR4-216ENST00000494503 GPNMBQ14956 572 aa11.15□□□□□ -0.62
UBR4-216ENST00000494503 WTAPQ15007 396 aa11.15□□□□□ -0.62
UBR4-216ENST00000494503 SART3Q15020 963 aaKnown RBP11.15□□□□□ -0.62
UBR4-216ENST00000494503 TCTN1Q2MV58 587 aa11.15□□□□□ -0.62
UBR4-216ENST00000494503 GNPTABQ3T906 1256 aa11.15□□□□□ -0.62
UBR4-216ENST00000494503 UTP14CQ5TAP6 766 aaKnown RBP11.15□□□□□ -0.62
UBR4-216ENST00000494503 MYSM1Q5VVJ2 828 aa11.15□□□□□ -0.62
UBR4-216ENST00000494503 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.15□□□□□ -0.62
UBR4-216ENST00000494503 DBF4BQ8NFT6 615 aa11.15□□□□□ -0.62
UBR4-216ENST00000494503 EXOC6Q8TAG9 804 aa11.15□□□□□ -0.62
UBR4-216ENST00000494503 GPKOWQ92917 476 aaPredicted RBP eCLIP11.15□□□□□ -0.62
UBR4-216ENST00000494503 C17orf80Q9BSJ5 609 aa11.15□□□□□ -0.62
UBR4-216ENST00000494503 EPHX3Q9H6B9 360 aa11.15□□□□□ -0.62
UBR4-216ENST00000494503 SUGCTQ9HAC7 445 aa11.15□□□□□ -0.62
UBR4-216ENST00000494503 RTEL1Q9NZ71 1219 aa11.15□□□□□ -0.62
UBR4-216ENST00000494503 MAD2L2Q9UI95 211 aa11.15□□□□□ -0.62
UBR4-216ENST00000494503 FAM86C2PA6NEL3 165 aa11.14□□□□□ -0.63
UBR4-216ENST00000494503 H3BRB1 525 aa11.14□□□□□ -0.63
UBR4-216ENST00000494503 OPLAHO14841 1288 aa11.14□□□□□ -0.63
UBR4-216ENST00000494503 LPXNO60711 386 aa11.14□□□□□ -0.63
UBR4-216ENST00000494503 SMIM10L2AP0DMW4 78 aa11.14□□□□□ -0.63
UBR4-216ENST00000494503 SMIM10L2BP0DMW5 78 aa11.14□□□□□ -0.63
UBR4-216ENST00000494503 SP2Q02086 613 aa11.14□□□□□ -0.63
UBR4-216ENST00000494503 AAMPQ13685 434 aa11.14□□□□□ -0.63
UBR4-216ENST00000494503 CATIPQ7Z7H3 387 aa11.14□□□□□ -0.63
UBR4-216ENST00000494503 SMARCC2Q8TAQ2 1214 aa11.14□□□□□ -0.63
UBR4-216ENST00000494503 SEPT8Q92599 483 aa11.14□□□□□ -0.63
UBR4-216ENST00000494503 CUL5Q93034 780 aa11.14□□□□□ -0.63
UBR4-216ENST00000494503 OSBPL3Q9H4L5 887 aa11.14□□□□□ -0.63
UBR4-216ENST00000494503 TUT1Q9H6E5 874 aaKnown RBP11.14□□□□□ -0.63
UBR4-216ENST00000494503 INSL6Q9Y581 213 aa11.14□□□□□ -0.63
UBR4-216ENST00000494503 U3KPZ7 1027 aaPredicted RBP11.14□□□□□ -0.63
UBR4-216ENST00000494503 NLRC5Q86WI3 1866 aa11.14□□□□□ -0.63
UBR4-216ENST00000494503 HAS3O00219 553 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 TREHO43280 583 aa11.13□□□□□ -0.63
UBR4-216ENST00000494503 RGS20O76081 388 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms