RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 FAM53CQ9NYF3 392 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 LGALS16A8MUM7 142 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 H3BQF6 201 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 MEIS2O14770 477 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 HERVK_113P62684 666 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 SPAG1Q07617 926 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 ABCB5Q2M3G0 1257 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 CCDC174Q6PII3 467 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 CERS3Q8IU89 383 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 MMRN2Q9H8L6 949 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 PDE11AQ9HCR9 933 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 SMARCAL1Q9NZC9 954 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 PI4KBQ9UBF8 816 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 PCDHA12Q9UN75 941 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 ARFGEF1Q9Y6D6 1849 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 FAM86B1E9PN63 330 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 MED24O75448 989 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 FAM86B2P0C5J1 330 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 MATR3P43243 847 aaKnown RBP eCLIP13.81□□□□□ -0.27e-7■■□□□ 14.2
PHF3-205ENST00000494284 STRIP1Q5VSL9 837 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 RABGGTAQ92696 567 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 FUT8Q9BYC5 575 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 TANGO6Q9C0B7 1094 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 TMEM39BQ9GZU3 492 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 FZD1Q9UP38 647 aa13.81□□□□□ -0.2
PHF3-205ENST00000494284 OPLAHO14841 1288 aa13.8□□□□□ -0.2
PHF3-205ENST00000494284 CXCR5P32302 372 aa13.8□□□□□ -0.2
PHF3-205ENST00000494284 KCNB1Q14721 858 aa13.8□□□□□ -0.2
PHF3-205ENST00000494284 DNAAF5Q86Y56 855 aa13.8□□□□□ -0.2
PHF3-205ENST00000494284 RAD54LQ92698 747 aa13.8□□□□□ -0.2
PHF3-205ENST00000494284 C7orf25Q9BPX7 421 aa13.8□□□□□ -0.2
PHF3-205ENST00000494284 CRACR2AQ9BSW2 395 aa13.8□□□□□ -0.2
PHF3-205ENST00000494284 FBXO28Q9NVF7 368 aa13.8□□□□□ -0.2
PHF3-205ENST00000494284 SWAP70Q9UH65 585 aa13.8□□□□□ -0.2
PHF3-205ENST00000494284 COL4A5P29400 1685 aa13.8□□□□□ -0.2
PHF3-205ENST00000494284 SFI1A8K8P3 1242 aa13.8□□□□□ -0.2
PHF3-205ENST00000494284 LAD1O00515 517 aa13.8□□□□□ -0.2
PHF3-205ENST00000494284 CASP5P51878 434 aa13.8□□□□□ -0.2
PHF3-205ENST00000494284 ARID5AQ03989 594 aa13.8□□□□□ -0.2
PHF3-205ENST00000494284 ANO3Q9BYT9 981 aa13.8□□□□□ -0.2
PHF3-205ENST00000494284 TNS1Q9HBL0 1735 aaKnown RBP13.8□□□□□ -0.2
PHF3-205ENST00000494284 JADE2Q9NQC1 790 aa13.8□□□□□ -0.2
PHF3-205ENST00000494284 MYO6Q9UM54 1294 aa13.8□□□□□ -0.2
PHF3-205ENST00000494284 ESYT2A0FGR8 921 aa13.79□□□□□ -0.2
PHF3-205ENST00000494284 CTAGE15A4D2H0 777 aa13.79□□□□□ -0.2
PHF3-205ENST00000494284 EGFRP00533 1210 aa13.79□□□□□ -0.2
PHF3-205ENST00000494284 CTAGE8P0CG41 777 aa13.79□□□□□ -0.2
PHF3-205ENST00000494284 CCNE1P24864 410 aa13.79□□□□□ -0.2
PHF3-205ENST00000494284 KRT79Q5XKE5 535 aa13.79□□□□□ -0.2
PHF3-205ENST00000494284 CTAGE6Q86UF2 777 aa13.79□□□□□ -0.2
PHF3-205ENST00000494284 CTAGE4Q8IX94 777 aa13.79□□□□□ -0.2
PHF3-205ENST00000494284 C7orf43Q8WVR3 580 aa13.79□□□□□ -0.2
PHF3-205ENST00000494284 AK8Q96MA6 479 aa13.79□□□□□ -0.2
PHF3-205ENST00000494284 MMS19Q96T76 1030 aa13.79□□□□□ -0.2
PHF3-205ENST00000494284 NHEJ1Q9H9Q4 299 aaPredicted RBP13.79□□□□□ -0.2
PHF3-205ENST00000494284 PSMD14O00487 310 aa13.79□□□□□ -0.2
PHF3-205ENST00000494284 CHMP2AO43633 222 aa13.79□□□□□ -0.2
PHF3-205ENST00000494284 PABPC4Q13310 644 aaKnown RBP eCLIP13.79□□□□□ -0.2
PHF3-205ENST00000494284 PTPROQ16827 1216 aa13.79□□□□□ -0.2
PHF3-205ENST00000494284 EHD2Q9NZN4 543 aa13.79□□□□□ -0.2
PHF3-205ENST00000494284 PKD2L1Q9P0L9 805 aa13.79□□□□□ -0.2
PHF3-205ENST00000494284 ITIH6Q6UXX5 1313 aa13.78□□□□□ -0.2
PHF3-205ENST00000494284 RSPH10B2B2RC85 870 aa13.78□□□□□ -0.2
PHF3-205ENST00000494284 RSPH10BP0C881 870 aa13.78□□□□□ -0.2
PHF3-205ENST00000494284 TMEM266Q2M3C6 531 aa13.78□□□□□ -0.2
PHF3-205ENST00000494284 RBM26Q5T8P6 1007 aaKnown RBP13.78□□□□□ -0.2
PHF3-205ENST00000494284 NLRC4Q9NPP4 1024 aa13.78□□□□□ -0.2
PHF3-205ENST00000494284 RGL1Q9NZL6 768 aa13.78□□□□□ -0.2
PHF3-205ENST00000494284 PPP1R1BQ9UD71 204 aaPredicted RBP13.78□□□□□ -0.2
PHF3-205ENST00000494284 ATF5Q9Y2D1 282 aaPredicted RBP13.78□□□□□ -0.2
PHF3-205ENST00000494284 FXR2P51116 673 aaKnown RBP eCLIP13.78□□□□□ -0.21e-15■■■□□ 14.8
PHF3-205ENST00000494284 MRPL12P52815 198 aaKnown RBP13.78□□□□□ -0.2
PHF3-205ENST00000494284 SLC15A2Q16348 729 aa13.78□□□□□ -0.2
PHF3-205ENST00000494284 FAM83BQ5T0W9 1011 aa13.78□□□□□ -0.2
PHF3-205ENST00000494284 VPS18Q9P253 973 aa13.78□□□□□ -0.2
PHF3-205ENST00000494284 KIF20AO95235 890 aa13.77□□□□□ -0.2
PHF3-205ENST00000494284 NT5C2P49902 561 aa13.77□□□□□ -0.2
PHF3-205ENST00000494284 FAM193AP78312 1265 aa13.77□□□□□ -0.2
PHF3-205ENST00000494284 KCNA1Q09470 495 aa13.77□□□□□ -0.2
PHF3-205ENST00000494284 COASYQ13057 564 aa13.77□□□□□ -0.2
PHF3-205ENST00000494284 GPATCH4Q5T3I0 446 aaKnown RBP13.77□□□□□ -0.2
PHF3-205ENST00000494284 POTEAQ6S8J7 498 aa13.77□□□□□ -0.2
PHF3-205ENST00000494284 KSR1Q8IVT5 923 aa13.77□□□□□ -0.2
PHF3-205ENST00000494284 CAGE1Q8TC20 777 aa13.77□□□□□ -0.2
PHF3-205ENST00000494284 CCDC102AQ96A19 550 aa13.77□□□□□ -0.2
PHF3-205ENST00000494284 JAKMIP2Q96AA8 810 aa13.77□□□□□ -0.2
PHF3-205ENST00000494284 DNAJC19Q96DA6 116 aa13.77□□□□□ -0.2
PHF3-205ENST00000494284 SH2D3AQ9BRG2 576 aa13.77□□□□□ -0.2
PHF3-205ENST00000494284 PYM1Q9BRP8 204 aaKnown RBP13.77□□□□□ -0.2
PHF3-205ENST00000494284 MLXIPQ9HAP2 919 aa13.77□□□□□ -0.2
PHF3-205ENST00000494284 SUGT1Q9Y2Z0 365 aa13.77□□□□□ -0.2
PHF3-205ENST00000494284 CFBP00751 764 aa13.77□□□□□ -0.21
PHF3-205ENST00000494284 TATDN1Q6P1N9 297 aa13.77□□□□□ -0.21
PHF3-205ENST00000494284 MTMR8Q96EF0 704 aa13.77□□□□□ -0.21
PHF3-205ENST00000494284 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.77□□□□□ -0.21
PHF3-205ENST00000494284 QSER1Q2KHR3 1735 aa13.77□□□□□ -0.21
PHF3-205ENST00000494284 ZNF263O14978 683 aa13.77□□□□□ -0.21
PHF3-205ENST00000494284 SMARCA1P28370 1054 aa13.77□□□□□ -0.21
PHF3-205ENST00000494284 TNNT3P45378 269 aaPredicted RBP13.77□□□□□ -0.21
PHF3-205ENST00000494284 LMAN1P49257 510 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms