RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 TET1Q8NFU7 2136 aa15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 DHX38Q92620 1227 aaKnown RBP15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 CUL5Q93034 780 aa15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 EMID1Q96A84 441 aaPredicted RBP15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 TCEANC2Q96MN5 208 aa15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 LZTS2Q9BRK4 669 aa15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 SPZ1Q9BXG8 430 aa15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 FTOQ9C0B1 505 aaKnown RBP eCLIP15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 SEC63Q9UGP8 760 aaKnown RBP15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 YBX2Q9Y2T7 364 aaKnown RBP15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 CCDC69A6NI79 296 aa15.47■□□□□ 0.07
CTDSP1-212ENST00000494067 TGFB3P10600 412 aa15.47■□□□□ 0.07
CTDSP1-212ENST00000494067 HOXD8P13378 290 aaPredicted RBP15.47■□□□□ 0.07
CTDSP1-212ENST00000494067 UBA1P22314 1058 aaKnown RBP15.47■□□□□ 0.07
CTDSP1-212ENST00000494067 MCM5P33992 734 aa15.47■□□□□ 0.07
CTDSP1-212ENST00000494067 HSDL1Q3SXM5 330 aa15.47■□□□□ 0.07
CTDSP1-212ENST00000494067 GNPTABQ3T906 1256 aa15.47■□□□□ 0.07
CTDSP1-212ENST00000494067 USP17L6PQ6QN14 398 aa15.47■□□□□ 0.07
CTDSP1-212ENST00000494067 PPTC7Q8NI37 304 aa15.47■□□□□ 0.07
CTDSP1-212ENST00000494067 CAGE1Q8TC20 777 aa15.47■□□□□ 0.07
CTDSP1-212ENST00000494067 PRUNE2Q8WUY3 3088 aa15.47■□□□□ 0.07
CTDSP1-212ENST00000494067 WNT8BQ93098 351 aa15.47■□□□□ 0.07
CTDSP1-212ENST00000494067 RRP36Q96EU6 259 aaKnown RBP15.47■□□□□ 0.07
CTDSP1-212ENST00000494067 TMEM87BQ96K49 555 aa15.47■□□□□ 0.07
CTDSP1-212ENST00000494067 MAP3K14Q99558 947 aa15.47■□□□□ 0.07
CTDSP1-212ENST00000494067 MLXIPQ9HAP2 919 aa15.47■□□□□ 0.07
CTDSP1-212ENST00000494067 CHD7Q9P2D1 2997 aa15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 HAS3O00219 553 aa15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 MEIS2O14770 477 aa15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 PPFIA4O75335 1185 aa15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 STAM2O75886 525 aa15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 PARNO95453 639 aaKnown RBP15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 IQCF3P0C7M6 154 aa15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 CALM1P0DP23 149 aa15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 CALM2P0DP24 149 aa15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 CALM3P0DP25 149 aa15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 MYOGP15173 224 aa15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 ATP2A2P16615 1042 aaKnown RBP15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 RABGGTBP53611 331 aa15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 ZNF200P98182 395 aaPredicted RBP15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 TCTN1Q2MV58 587 aa15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 MYSM1Q5VVJ2 828 aa15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 SESTD1Q86VW0 696 aa15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 SMARCC2Q8TAQ2 1214 aa15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 SPATA33Q96N06 139 aa15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 ALG1Q9BT22 464 aa15.46■□□□□ 0.07
CTDSP1-212ENST00000494067 SPTBN5Q9NRC6 3674 aaKnown RBP15.46■□□□□ 0.06
CTDSP1-212ENST00000494067 KIF28PB7ZC32 967 aa15.45■□□□□ 0.06
CTDSP1-212ENST00000494067 GGPS1O95749 300 aa15.45■□□□□ 0.06
CTDSP1-212ENST00000494067 F2P00734 622 aa15.45■□□□□ 0.06
CTDSP1-212ENST00000494067 SMARCA1P28370 1054 aa15.45■□□□□ 0.06
CTDSP1-212ENST00000494067 LIFRP42702 1097 aa15.45■□□□□ 0.06
CTDSP1-212ENST00000494067 PSEN2P49810 448 aa15.45■□□□□ 0.06
CTDSP1-212ENST00000494067 MFSD10Q14728 455 aa15.45■□□□□ 0.06
CTDSP1-212ENST00000494067 CELF3Q5SZQ8 465 aaKnown RBP15.45■□□□□ 0.06
CTDSP1-212ENST00000494067 RNF20Q5VTR2 975 aa15.45■□□□□ 0.06
CTDSP1-212ENST00000494067 SYNE3Q6ZMZ3 975 aa15.45■□□□□ 0.06
CTDSP1-212ENST00000494067 AFAP1L1Q8TED9 768 aa15.45■□□□□ 0.06
CTDSP1-212ENST00000494067 NKX2-4Q9H2Z4 354 aa15.45■□□□□ 0.06
CTDSP1-212ENST00000494067 HDAC6Q9UBN7 1215 aa15.45■□□□□ 0.06
CTDSP1-212ENST00000494067 BRPF3Q9ULD4 1205 aa15.45■□□□□ 0.06
CTDSP1-212ENST00000494067 PCDHA11Q9Y5I1 949 aa15.45■□□□□ 0.06
CTDSP1-212ENST00000494067 VCANP13611 3396 aa15.45■□□□□ 0.06
CTDSP1-212ENST00000494067 REV3LO60673 3130 aa15.45■□□□□ 0.06
CTDSP1-212ENST00000494067 EXOSC10Q01780 885 aaKnown RBP15.44■□□□□ 0.06
CTDSP1-212ENST00000494067 KIAA0753Q2KHM9 967 aa15.44■□□□□ 0.06
CTDSP1-212ENST00000494067 PPP2R2DQ66LE6 453 aa15.44■□□□□ 0.06
CTDSP1-212ENST00000494067 TYW1BQ6NUM6 668 aa15.44■□□□□ 0.06
CTDSP1-212ENST00000494067 TRAF7Q6Q0C0 670 aa15.44■□□□□ 0.06
CTDSP1-212ENST00000494067 TMTC3Q6ZXV5 915 aa15.44■□□□□ 0.06
CTDSP1-212ENST00000494067 SGMS1Q86VZ5 419 aa15.44■□□□□ 0.06
CTDSP1-212ENST00000494067 CCDC82Q8N4S0 544 aa15.44■□□□□ 0.06
CTDSP1-212ENST00000494067 USP38Q8NB14 1042 aa15.44■□□□□ 0.06
CTDSP1-212ENST00000494067 PHOSPHO2Q8TCD6 241 aa15.44■□□□□ 0.06
CTDSP1-212ENST00000494067 INPP4AQ96PE3 977 aaPredicted RBP15.44■□□□□ 0.06
CTDSP1-212ENST00000494067 SLC9A7Q96T83 725 aa15.44■□□□□ 0.06
CTDSP1-212ENST00000494067 C16orf70Q9BSU1 422 aa15.44■□□□□ 0.06
CTDSP1-212ENST00000494067 PRDM12Q9H4Q4 367 aa15.44■□□□□ 0.06
CTDSP1-212ENST00000494067 RTEL1Q9NZ71 1219 aa15.44■□□□□ 0.06
CTDSP1-212ENST00000494067 GTF2IRD1Q9UHL9 959 aa15.44■□□□□ 0.06
CTDSP1-212ENST00000494067 CNTNAP5Q8WYK1 1306 aa15.43■□□□□ 0.06
CTDSP1-212ENST00000494067 NOP56O00567 594 aaKnown RBP15.43■□□□□ 0.06
CTDSP1-212ENST00000494067 BAIAP3O94812 1187 aa15.43■□□□□ 0.06
CTDSP1-212ENST00000494067 ARHGEF15O94989 841 aa15.43■□□□□ 0.06
CTDSP1-212ENST00000494067 CPA1P15085 419 aa15.43■□□□□ 0.06
CTDSP1-212ENST00000494067 SELPP16109 830 aa15.43■□□□□ 0.06
CTDSP1-212ENST00000494067 IGFBP4P22692 258 aa15.43■□□□□ 0.06
CTDSP1-212ENST00000494067 KCNJ6P48051 423 aa15.43■□□□□ 0.06
CTDSP1-212ENST00000494067 FUT2Q10981 343 aa15.43■□□□□ 0.06
CTDSP1-212ENST00000494067 NEDD9Q14511 834 aa15.43■□□□□ 0.06
CTDSP1-212ENST00000494067 UBE2SQ16763 222 aa15.43■□□□□ 0.06
CTDSP1-212ENST00000494067 TRIM71Q2Q1W2 868 aaKnown RBP15.43■□□□□ 0.06
CTDSP1-212ENST00000494067 MICU3Q86XE3 530 aa15.43■□□□□ 0.06
CTDSP1-212ENST00000494067 SYMPKQ92797 1274 aaKnown RBP15.43■□□□□ 0.06
CTDSP1-212ENST00000494067 SLC12A7Q9Y666 1083 aa15.43■□□□□ 0.06
CTDSP1-212ENST00000494067 SIP14410 1827 aa15.43■□□□□ 0.06
CTDSP1-212ENST00000494067 PIK3CDO00329 1044 aa15.42■□□□□ 0.06
CTDSP1-212ENST00000494067 PTK7Q13308 1070 aa15.42■□□□□ 0.06
CTDSP1-212ENST00000494067 ADGRE1Q14246 886 aa15.42■□□□□ 0.06
CTDSP1-212ENST00000494067 APOA5Q6Q788 366 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms