RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 FANCBQ8NB91 859 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 SMARCC2Q8TAQ2 1214 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 DHX38Q92620 1227 aaKnown RBP11.26□□□□□ -0.61
UFD1-210ENST00000494054 SPATA33Q96N06 139 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 INPP4AQ96PE3 977 aaPredicted RBP11.26□□□□□ -0.61
UFD1-210ENST00000494054 ALG1Q9BT22 464 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 ZNF576Q9H609 170 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 RTEL1Q9NZ71 1219 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 HDAC6Q9UBN7 1215 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 BRPF3Q9ULD4 1205 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 NOD1Q9Y239 953 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 TELO2Q9Y4R8 837 aa11.26□□□□□ -0.61
UFD1-210ENST00000494054 SCN5AQ14524 2016 aa11.25□□□□□ -0.61
UFD1-210ENST00000494054 SPATA31C2B4DYI2 1134 aa11.25□□□□□ -0.61
UFD1-210ENST00000494054 PIK3CDO00329 1044 aa11.25□□□□□ -0.61
UFD1-210ENST00000494054 PITPNM1O00562 1244 aa11.25□□□□□ -0.61
UFD1-210ENST00000494054 F2P00734 622 aa11.25□□□□□ -0.61
UFD1-210ENST00000494054 TGFB3P10600 412 aa11.25□□□□□ -0.61
UFD1-210ENST00000494054 ICAM3P32942 547 aa11.25□□□□□ -0.61
UFD1-210ENST00000494054 ZNF200P98182 395 aaPredicted RBP11.25□□□□□ -0.61
UFD1-210ENST00000494054 MFSD10Q14728 455 aa11.25□□□□□ -0.61
UFD1-210ENST00000494054 GPNMBQ14956 572 aa11.25□□□□□ -0.61
UFD1-210ENST00000494054 KIAA0753Q2KHM9 967 aa11.25□□□□□ -0.61
UFD1-210ENST00000494054 TSGA10IPQ3SY00 556 aa11.25□□□□□ -0.61
UFD1-210ENST00000494054 DHX32Q7L7V1 743 aaKnown RBP11.25□□□□□ -0.61
UFD1-210ENST00000494054 RETREG2Q8NC44 543 aa11.25□□□□□ -0.61
UFD1-210ENST00000494054 CCDC136Q96JN2 1154 aa11.25□□□□□ -0.61
UFD1-210ENST00000494054 SEC63Q9UGP8 760 aaKnown RBP11.25□□□□□ -0.61
UFD1-210ENST00000494054 GTF2IRD1Q9UHL9 959 aa11.25□□□□□ -0.61
UFD1-210ENST00000494054 YBX2Q9Y2T7 364 aaKnown RBP11.25□□□□□ -0.61
UFD1-210ENST00000494054 MYH7BA7E2Y1 1941 aa11.25□□□□□ -0.61
UFD1-210ENST00000494054 COL6A3P12111 3177 aa11.24□□□□□ -0.61
UFD1-210ENST00000494054 ZBBXA8MT70 800 aa11.24□□□□□ -0.61
UFD1-210ENST00000494054 CPA1P15085 419 aa11.24□□□□□ -0.61
UFD1-210ENST00000494054 RABGGTBP53611 331 aa11.24□□□□□ -0.61
UFD1-210ENST00000494054 BFSP2Q13515 415 aa11.24□□□□□ -0.61
UFD1-210ENST00000494054 APOA5Q6Q788 366 aa11.24□□□□□ -0.61
UFD1-210ENST00000494054 C7orf31Q8N865 590 aa11.24□□□□□ -0.61
UFD1-210ENST00000494054 MAFAQ8NHW3 353 aaPredicted RBP11.24□□□□□ -0.61
UFD1-210ENST00000494054 CUL5Q93034 780 aa11.24□□□□□ -0.61
UFD1-210ENST00000494054 WNT8BQ93098 351 aa11.24□□□□□ -0.61
UFD1-210ENST00000494054 C16orf70Q9BSU1 422 aa11.24□□□□□ -0.61
UFD1-210ENST00000494054 MTIF3Q9H2K0 278 aaKnown RBP11.24□□□□□ -0.61
UFD1-210ENST00000494054 NKX2-4Q9H2Z4 354 aa11.24□□□□□ -0.61
UFD1-210ENST00000494054 PSTPIP2Q9H939 334 aa11.24□□□□□ -0.61
UFD1-210ENST00000494054 MLXIPQ9HAP2 919 aa11.24□□□□□ -0.61
UFD1-210ENST00000494054 SLC4A7Q9Y6M7 1214 aa11.24□□□□□ -0.61
UFD1-210ENST00000494054 LAMA2P24043 3122 aaKnown RBP11.23□□□□□ -0.61
UFD1-210ENST00000494054 STAM2O75886 525 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 PFKMP08237 780 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 MYOGP15173 224 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 FOSL2P15408 326 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 RFC2P35250 354 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 FUT2Q10981 343 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 RAB30Q15771 203 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 UBE2SQ16763 222 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 TRIM71Q2Q1W2 868 aaKnown RBP11.23□□□□□ -0.61
UFD1-210ENST00000494054 GNPTABQ3T906 1256 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 PCNX4Q63HM2 1172 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 TYW1BQ6NUM6 668 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 SYNE3Q6ZMZ3 975 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 CYFIP1Q7L576 1253 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 HEATR3Q7Z4Q2 680 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 CAGE1Q8TC20 777 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 AFAP1L1Q8TED9 768 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 KCNB2Q92953 911 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 KATNAL1Q9BW62 490 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 FTOQ9C0B1 505 aaKnown RBP eCLIP11.23□□□□□ -0.61
UFD1-210ENST00000494054 FAM217BQ9NTX9 383 aaPredicted RBP11.23□□□□□ -0.61
UFD1-210ENST00000494054 MSRAQ9UJ68 235 aa11.23□□□□□ -0.61
UFD1-210ENST00000494054 KLF18A0A0U1RQI7 1052 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 ZBTB43O43298 467 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 FIBPO43427 364 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 ATP9AO75110 1047 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 LGALS2P05162 132 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 CKBP12277 381 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 SELPP16109 830 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 ATP2A2P16615 1042 aaKnown RBP11.22□□□□□ -0.61
UFD1-210ENST00000494054 CDC27P30260 824 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 RBL2Q08999 1139 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 NEDD9Q14511 834 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 TRIP12Q14669 1992 aaPredicted RBP11.22□□□□□ -0.61
UFD1-210ENST00000494054 RTN1Q16799 776 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 TCTN1Q2MV58 587 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 WWC2Q6AWC2 1192 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 XRRA1Q6P2D8 792 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 TRAF7Q6Q0C0 670 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 METTL7BQ6UX53 244 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 LRRC8DQ7L1W4 858 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 CCDC155Q8N6L0 562 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 TET1Q8NFU7 2136 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 CNTNAP5Q8WYK1 1306 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 GPR20Q99678 358 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 PRDM12Q9H4Q4 367 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 V9GY48 417 aaPredicted RBP11.22□□□□□ -0.61
UFD1-210ENST00000494054 CDH23Q9H251 3354 aa11.22□□□□□ -0.61
UFD1-210ENST00000494054 H3BRB1 525 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 DLL1O00548 723 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 NBNO60934 754 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 ACTN1P12814 892 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms