RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 HACL1Q9UJ83 578 aa12.73□□□□□ -0.37
RFC4-214ENST00000494047 PITPNM2Q9BZ72 1349 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 GRID2IPA4D2P6 1211 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 C6orf229H3BNL8 230 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 POLR3GO15318 223 aaPredicted RBP12.72□□□□□ -0.37
RFC4-214ENST00000494047 CYTH3O43739 400 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 OPA1O60313 960 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 SNHG28P0DPA3 235 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 CYP2D6P10635 497 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 BTDP43251 543 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 APLP1P51693 650 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 FKBP3Q00688 224 aaKnown RBP12.72□□□□□ -0.37
RFC4-214ENST00000494047 MCM6Q14566 821 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 HYIQ5T013 277 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 HAUS3Q68CZ6 603 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 WDR59Q6PJI9 974 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 STAG2Q8N3U4 1231 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 TBCKQ8TEA7 893 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 COG1Q8WTW3 980 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 TGFBRAP1Q8WUH2 860 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 STAMQ92783 540 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 CUL5Q93034 780 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 CCDC102AQ96A19 550 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 MTMR9Q96QG7 549 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 DUSP9Q99956 384 aaKnown RBP12.72□□□□□ -0.37
RFC4-214ENST00000494047 MXD3Q9BW11 206 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 ZC3H12CQ9C0D7 883 aaKnown RBP12.72□□□□□ -0.37
RFC4-214ENST00000494047 TMEM60Q9H2L4 133 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 NDST4Q9H3R1 872 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 SH2D4AQ9H788 454 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 ABCB6Q9NP58 842 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 CEP72Q9P209 647 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 GGA1Q9UJY5 639 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 SNX12Q9UMY4 172 aa12.72□□□□□ -0.37
RFC4-214ENST00000494047 BZW2Q9Y6E2 419 aaKnown RBP12.72□□□□□ -0.37
RFC4-214ENST00000494047 PNMA6FA0A0J9YX94 578 aa12.71□□□□□ -0.37
RFC4-214ENST00000494047 EPHB4P54760 987 aa12.71□□□□□ -0.37
RFC4-214ENST00000494047 HERVK_113P62684 666 aa12.71□□□□□ -0.37
RFC4-214ENST00000494047 VSNL1P62760 191 aa12.71□□□□□ -0.37
RFC4-214ENST00000494047 GPSM2P81274 684 aa12.71□□□□□ -0.37
RFC4-214ENST00000494047 PPFIA1Q13136 1202 aa12.71□□□□□ -0.37
RFC4-214ENST00000494047 SLC9C1Q4G0N8 1177 aa12.71□□□□□ -0.37
RFC4-214ENST00000494047 TMEM119Q4V9L6 283 aa12.71□□□□□ -0.37
RFC4-214ENST00000494047 CCDC181Q5TID7 509 aa12.71□□□□□ -0.37
RFC4-214ENST00000494047 CACNA2D4Q7Z3S7 1137 aa12.71□□□□□ -0.37
RFC4-214ENST00000494047 CCDC65Q8IXS2 484 aa12.71□□□□□ -0.37
RFC4-214ENST00000494047 SLFN12Q8IYM2 578 aa12.71□□□□□ -0.37
RFC4-214ENST00000494047 TBC1D16Q8TBP0 767 aa12.71□□□□□ -0.37
RFC4-214ENST00000494047 RAD54LQ92698 747 aa12.71□□□□□ -0.37
RFC4-214ENST00000494047 CALR3Q96L12 384 aaKnown RBP12.71□□□□□ -0.37
RFC4-214ENST00000494047 CCDC17Q96LX7 622 aa12.71□□□□□ -0.37
RFC4-214ENST00000494047 NOX5Q96PH1 765 aa12.71□□□□□ -0.37
RFC4-214ENST00000494047 PNKPQ96T60 521 aa12.71□□□□□ -0.37
RFC4-214ENST00000494047 IRX2Q9BZI1 471 aaPredicted RBP12.71□□□□□ -0.37
RFC4-214ENST00000494047 TAF1DQ9H5J8 278 aaPredicted RBP12.71□□□□□ -0.37
RFC4-214ENST00000494047 PDE11AQ9HCR9 933 aa12.71□□□□□ -0.37
RFC4-214ENST00000494047 LTBP1Q14766 1721 aa12.71□□□□□ -0.38
RFC4-214ENST00000494047 TRIM49BA6NDI0 452 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 BTNL10A8MVZ5 291 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 GOLGA8KD6RF30 607 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 RBAK-RBAKDNI3L0D1 243 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 TBX3O15119 743 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 AKR1B10O60218 316 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 TTLL1O95922 423 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 HLA-DOAP06340 250 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 RHOXF2BP0C7M4 288 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 LMAN1P49257 510 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 AP3B2Q13367 1082 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 CLUL1Q15846 466 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 CCDC96Q2M329 555 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 EDRF1Q3B7T1 1238 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 MIIPQ5JXC2 388 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 ALS2CLQ60I27 953 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 CIAPIN1Q6FI81 312 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 TYW1BQ6NUM6 668 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 LDHDQ86WU2 507 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 MYOCDQ8IZQ8 938 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 PIAS4Q8N2W9 510 aaPredicted RBP12.7□□□□□ -0.38
RFC4-214ENST00000494047 ERMNQ8TAM6 284 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 AFAP1L1Q8TED9 768 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 RUFY1Q96T51 708 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 CHP1Q99653 195 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 RHOXF2Q9BQY4 288 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 CD209Q9NNX6 404 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 JADE2Q9NQC1 790 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 VPS18Q9P253 973 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 POLLQ9UGP5 575 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 SYNPO2Q9UMS6 1093 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 REXO2Q9Y3B8 237 aaKnown RBP12.7□□□□□ -0.38
RFC4-214ENST00000494047 GJA3Q9Y6H8 435 aa12.7□□□□□ -0.38
RFC4-214ENST00000494047 GREB1LQ9C091 1923 aaPredicted RBP12.69□□□□□ -0.38
RFC4-214ENST00000494047 USP17L3A6NCW0 530 aa12.69□□□□□ -0.38
RFC4-214ENST00000494047 USP17L4A6NCW7 530 aa12.69□□□□□ -0.38
RFC4-214ENST00000494047 ERICH4A6NGS2 130 aa12.69□□□□□ -0.38
RFC4-214ENST00000494047 G3V3G9 751 aa12.69□□□□□ -0.38
RFC4-214ENST00000494047 TULP2O00295 520 aa12.69□□□□□ -0.38
RFC4-214ENST00000494047 UFL1O94874 794 aa12.69□□□□□ -0.38
RFC4-214ENST00000494047 PDHBP11177 359 aa12.69□□□□□ -0.38
RFC4-214ENST00000494047 CAPN2P17655 700 aa12.69□□□□□ -0.38
RFC4-214ENST00000494047 EPHX2P34913 555 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms