RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 CALM3P0DP25 149 aa27.34■■□□□ 1.97
RHBDD3-206ENST00000493894 HOXD8P13378 290 aaPredicted RBP27.34■■□□□ 1.97
RHBDD3-206ENST00000493894 LIFRP42702 1097 aa27.34■■□□□ 1.97
RHBDD3-206ENST00000493894 KIAA0753Q2KHM9 967 aa27.34■■□□□ 1.97
RHBDD3-206ENST00000493894 GNPTABQ3T906 1256 aa27.34■■□□□ 1.97
RHBDD3-206ENST00000493894 AFAP1L1Q8TED9 768 aa27.34■■□□□ 1.97
RHBDD3-206ENST00000493894 ZFP91Q96JP5 570 aaPredicted RBP27.34■■□□□ 1.97
RHBDD3-206ENST00000493894 ALG1Q9BT22 464 aa27.34■■□□□ 1.97
RHBDD3-206ENST00000493894 FTOQ9C0B1 505 aaKnown RBP eCLIP27.34■■□□□ 1.97
RHBDD3-206ENST00000493894 YBX2Q9Y2T7 364 aaKnown RBP27.34■■□□□ 1.97
RHBDD3-206ENST00000493894 MYH7BA7E2Y1 1941 aa27.33■■□□□ 1.97
RHBDD3-206ENST00000493894 SORBS3O60504 671 aa27.33■■□□□ 1.97
RHBDD3-206ENST00000493894 STAM2O75886 525 aa27.33■■□□□ 1.97
RHBDD3-206ENST00000493894 NECTIN1Q15223 517 aa27.33■■□□□ 1.97
RHBDD3-206ENST00000493894 HSDL1Q3SXM5 330 aa27.33■■□□□ 1.97
RHBDD3-206ENST00000493894 SMARCC2Q8TAQ2 1214 aa27.33■■□□□ 1.97
RHBDD3-206ENST00000493894 CUL5Q93034 780 aa27.33■■□□□ 1.97
RHBDD3-206ENST00000493894 CTAGE1Q96RT6 745 aa27.33■■□□□ 1.97
RHBDD3-206ENST00000493894 PRDM12Q9H4Q4 367 aa27.33■■□□□ 1.97
RHBDD3-206ENST00000493894 HDAC6Q9UBN7 1215 aa27.33■■□□□ 1.97
RHBDD3-206ENST00000493894 PCDHA11Q9Y5I1 949 aa27.33■■□□□ 1.97
RHBDD3-206ENST00000493894 HAS3O00219 553 aa27.32■■□□□ 1.96
RHBDD3-206ENST00000493894 PPFIA4O75335 1185 aa27.32■■□□□ 1.96
RHBDD3-206ENST00000493894 PLEKHA8P1O95397 391 aa27.32■■□□□ 1.96
RHBDD3-206ENST00000493894 RABGGTBP53611 331 aa27.32■■□□□ 1.96
RHBDD3-206ENST00000493894 RNF20Q5VTR2 975 aa27.32■■□□□ 1.96
RHBDD3-206ENST00000493894 MLXIPQ9HAP2 919 aa27.32■■□□□ 1.96
RHBDD3-206ENST00000493894 SLC12A7Q9Y666 1083 aa27.32■■□□□ 1.96
RHBDD3-206ENST00000493894 RXRAP19793 462 aa27.31■■□□□ 1.96
RHBDD3-206ENST00000493894 SP2Q02086 613 aa27.31■■□□□ 1.96
RHBDD3-206ENST00000493894 RBL2Q08999 1139 aa27.31■■□□□ 1.96
RHBDD3-206ENST00000493894 GPKOWQ92917 476 aaPredicted RBP eCLIP27.31■■□□□ 1.96
RHBDD3-206ENST00000493894 INPP4AQ96PE3 977 aaPredicted RBP27.31■■□□□ 1.96
RHBDD3-206ENST00000493894 SLC9A7Q96T83 725 aa27.31■■□□□ 1.96
RHBDD3-206ENST00000493894 SELPP16109 830 aa27.3■■□□□ 1.96
RHBDD3-206ENST00000493894 COL9A3Q14050 684 aaPredicted RBP27.3■■□□□ 1.96
RHBDD3-206ENST00000493894 PPP2R2DQ66LE6 453 aa27.3■■□□□ 1.96
RHBDD3-206ENST00000493894 LRRC8DQ7L1W4 858 aa27.3■■□□□ 1.96
RHBDD3-206ENST00000493894 SKAP1Q86WV1 359 aa27.3■■□□□ 1.96
RHBDD3-206ENST00000493894 SRBD1Q8N5C6 995 aaKnown RBP27.3■■□□□ 1.96
RHBDD3-206ENST00000493894 DHX38Q92620 1227 aaKnown RBP27.3■■□□□ 1.96
RHBDD3-206ENST00000493894 PIK3CDO00329 1044 aa27.29■■□□□ 1.96
RHBDD3-206ENST00000493894 PARNO95453 639 aaKnown RBP27.29■■□□□ 1.96
RHBDD3-206ENST00000493894 ICAM3P32942 547 aa27.29■■□□□ 1.96
RHBDD3-206ENST00000493894 MRPS9P82933 396 aaKnown RBP27.29■■□□□ 1.96
RHBDD3-206ENST00000493894 USP17L6PQ6QN14 398 aa27.29■■□□□ 1.96
RHBDD3-206ENST00000493894 LRRC2Q9BYS8 371 aa27.29■■□□□ 1.96
RHBDD3-206ENST00000493894 CHD9Q3L8U1 2897 aa27.29■■□□□ 1.96
RHBDD3-206ENST00000493894 NOP56O00567 594 aaKnown RBP27.28■■□□□ 1.96
RHBDD3-206ENST00000493894 FIBPO43427 364 aa27.28■■□□□ 1.96
RHBDD3-206ENST00000493894 BAIAP3O94812 1187 aa27.28■■□□□ 1.96
RHBDD3-206ENST00000493894 PTK7Q13308 1070 aa27.28■■□□□ 1.96
RHBDD3-206ENST00000493894 RAB11FIP4Q86YS3 637 aa27.28■■□□□ 1.96
RHBDD3-206ENST00000493894 CMTR1Q8N1G2 835 aaKnown RBP27.28■■□□□ 1.96
RHBDD3-206ENST00000493894 TRIP12Q14669 1992 aaPredicted RBP27.28■■□□□ 1.96
RHBDD3-206ENST00000493894 PRUNE2Q8WUY3 3088 aa27.27■■□□□ 1.96
RHBDD3-206ENST00000493894 MEIS2O14770 477 aa27.27■■□□□ 1.96
RHBDD3-206ENST00000493894 CKBP12277 381 aa27.27■■□□□ 1.96
RHBDD3-206ENST00000493894 NEDD9Q14511 834 aa27.27■■□□□ 1.96
RHBDD3-206ENST00000493894 PCNX4Q63HM2 1172 aa27.27■■□□□ 1.96
RHBDD3-206ENST00000493894 XRRA1Q6P2D8 792 aa27.27■■□□□ 1.96
RHBDD3-206ENST00000493894 SGMS1Q86VZ5 419 aa27.27■■□□□ 1.96
RHBDD3-206ENST00000493894 MICU3Q86XE3 530 aa27.27■■□□□ 1.96
RHBDD3-206ENST00000493894 PHOSPHO2Q8TCD6 241 aa27.27■■□□□ 1.96
RHBDD3-206ENST00000493894 C16orf70Q9BSU1 422 aa27.27■■□□□ 1.96
RHBDD3-206ENST00000493894 COL25A1Q9BXS0 654 aaPredicted RBP27.27■■□□□ 1.96
RHBDD3-206ENST00000493894 RTEL1Q9NZ71 1219 aa27.27■■□□□ 1.96
RHBDD3-206ENST00000493894 SPATA31C2B4DYI2 1134 aa27.26■■□□□ 1.95
RHBDD3-206ENST00000493894 MYOGP15173 224 aa27.26■■□□□ 1.95
RHBDD3-206ENST00000493894 METTL7BQ6UX53 244 aa27.26■■□□□ 1.95
RHBDD3-206ENST00000493894 TMTC3Q6ZXV5 915 aa27.26■■□□□ 1.95
RHBDD3-206ENST00000493894 USP38Q8NB14 1042 aa27.26■■□□□ 1.95
RHBDD3-206ENST00000493894 CDC45O75419 566 aa27.25■■□□□ 1.95
RHBDD3-206ENST00000493894 LGALS2P05162 132 aa27.25■■□□□ 1.95
RHBDD3-206ENST00000493894 KCNJ6P48051 423 aa27.25■■□□□ 1.95
RHBDD3-206ENST00000493894 SYNE3Q6ZMZ3 975 aa27.25■■□□□ 1.95
RHBDD3-206ENST00000493894 FANCBQ8NB91 859 aa27.25■■□□□ 1.95
RHBDD3-206ENST00000493894 NEK1Q96PY6 1258 aa27.25■■□□□ 1.95
RHBDD3-206ENST00000493894 PSTPIP2Q9H939 334 aa27.25■■□□□ 1.95
RHBDD3-206ENST00000493894 H3BRB1 525 aa27.24■■□□□ 1.95
RHBDD3-206ENST00000493894 CA3P07451 260 aa27.24■■□□□ 1.95
RHBDD3-206ENST00000493894 SEMA3FQ13275 785 aa27.24■■□□□ 1.95
RHBDD3-206ENST00000493894 CNKSR3Q6P9H4 555 aa27.24■■□□□ 1.95
RHBDD3-206ENST00000493894 CYFIP1Q7L576 1253 aa27.24■■□□□ 1.95
RHBDD3-206ENST00000493894 NLRX1Q86UT6 975 aa27.24■■□□□ 1.95
RHBDD3-206ENST00000493894 CCDC82Q8N4S0 544 aa27.24■■□□□ 1.95
RHBDD3-206ENST00000493894 TUT1Q9H6E5 874 aaKnown RBP27.24■■□□□ 1.95
RHBDD3-206ENST00000493894 TET1Q8NFU7 2136 aa27.23■■□□□ 1.95
RHBDD3-206ENST00000493894 CUL9Q8IWT3 2517 aa27.23■■□□□ 1.95
RHBDD3-206ENST00000493894 IGFBP4P22692 258 aa27.23■■□□□ 1.95
RHBDD3-206ENST00000493894 ZNF200P98182 395 aaPredicted RBP27.23■■□□□ 1.95
RHBDD3-206ENST00000493894 ADGRE1Q14246 886 aa27.23■■□□□ 1.95
RHBDD3-206ENST00000493894 TRIM71Q2Q1W2 868 aaKnown RBP27.23■■□□□ 1.95
RHBDD3-206ENST00000493894 HERC6Q8IVU3 1022 aa27.23■■□□□ 1.95
RHBDD3-206ENST00000493894 USP26Q9BXU7 913 aa27.23■■□□□ 1.95
RHBDD3-206ENST00000493894 BCAS3Q9H6U6 928 aa27.23■■□□□ 1.95
RHBDD3-206ENST00000493894 hCG_1642624A0A1W2PR95 340 aa27.22■■□□□ 1.95
RHBDD3-206ENST00000493894 C17orf102A2RUQ5 167 aa27.22■■□□□ 1.95
RHBDD3-206ENST00000493894 KIF28PB7ZC32 967 aa27.22■■□□□ 1.95
RHBDD3-206ENST00000493894 CXCL10P02778 98 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms