RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 NCOR1O75376 2440 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 HAS3O00219 553 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 IFIT3O14879 490 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 GTPBP6O43824 516 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 TLL1O43897 1013 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 SORBS3O60504 671 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 RGS20O76081 388 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 CYP21A2P08686 494 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 WDR5P61964 334 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 GRM4Q14833 912 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 GPNMBQ14956 572 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 SKIV2LQ15477 1246 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 HSDL1Q3SXM5 330 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 MYSM1Q5VVJ2 828 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 CNKSR3Q6P9H4 555 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 RALYLQ86SE5 291 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 VSIG10LQ86VR7 867 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 RUFY2Q8WXA3 655 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 ARNTL2Q8WYA1 636 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 SPATA33Q96N06 139 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 PIGSQ96S52 555 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 RIOX1Q9H6W3 641 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 MTCH2Q9Y6C9 303 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 ATG2AQ2TAZ0 1938 aa11.91□□□□□ -0.5
NUDCD3-210ENST00000493613 EPOPA6NHQ4 379 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 GCOM1H8Y6P7 765 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 NBNO60934 754 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 PPFIA4O75335 1185 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 ARHGEF15O94989 841 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 GGPS1O95749 300 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 POLR2MP0CAP2 368 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 TGFB3P10600 412 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 HOXD8P13378 290 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 POU3F3P20264 500 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 UBA1P22314 1058 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 CHMLP26374 656 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 CCND2P30279 289 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 IRX6P78412 446 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 DEFB103AP81534 67 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 SP2Q02086 613 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 TFF2Q03403 129 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 PTH1RQ03431 593 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 PTK7Q13308 1070 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 WTAPQ15007 396 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 SART3Q15020 963 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 SLC35G1Q2M3R5 365 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 CELF3Q5SZQ8 465 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 TMCO2Q7Z6W1 182 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 FCHSD1Q86WN1 690 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 NCOA7Q8NI08 942 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 IL31RAQ8NI17 732 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 ZFP91Q96JP5 570 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 UHRF1Q96T88 793 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 ZBED2Q9BTP6 218 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 SENP2Q9HC62 589 aa11.9□□□□□ -0.5
NUDCD3-210ENST00000493613 PNMA6FA0A0J9YX94 578 aa11.89□□□□□ -0.51
NUDCD3-210ENST00000493613 LCHNA4D1U4 455 aa11.89□□□□□ -0.51
NUDCD3-210ENST00000493613 E7EWF7 191 aa11.89□□□□□ -0.51
NUDCD3-210ENST00000493613 CYTH3O43739 400 aa11.89□□□□□ -0.51
NUDCD3-210ENST00000493613 CXCL10P02778 98 aa11.89□□□□□ -0.51
NUDCD3-210ENST00000493613 ZNF200P98182 395 aaPredicted RBP11.89□□□□□ -0.51
NUDCD3-210ENST00000493613 TROAPQ12815 778 aa11.89□□□□□ -0.51
NUDCD3-210ENST00000493613 IKBKEQ14164 716 aa11.89□□□□□ -0.51
NUDCD3-210ENST00000493613 AAK1Q2M2I8 961 aa11.89□□□□□ -0.51
NUDCD3-210ENST00000493613 ZNF618Q5T7W0 954 aa11.89□□□□□ -0.51
NUDCD3-210ENST00000493613 KRT40Q6A162 431 aa11.89□□□□□ -0.51
NUDCD3-210ENST00000493613 WNT8BQ93098 351 aa11.89□□□□□ -0.51
NUDCD3-210ENST00000493613 MLXIPQ9HAP2 919 aa11.89□□□□□ -0.51
NUDCD3-210ENST00000493613 TAF6LQ9Y6J9 622 aa11.89□□□□□ -0.51
NUDCD3-210ENST00000493613 ABHD14A-ACY1A0A1B0GW23 586 aa11.88□□□□□ -0.51
NUDCD3-210ENST00000493613 H3BRB1 525 aa11.88□□□□□ -0.51
NUDCD3-210ENST00000493613 EFCAB14O75071 495 aa11.88□□□□□ -0.51
NUDCD3-210ENST00000493613 HIC1Q14526 733 aa11.88□□□□□ -0.51
NUDCD3-210ENST00000493613 TCTN1Q2MV58 587 aa11.88□□□□□ -0.51
NUDCD3-210ENST00000493613 TRIM71Q2Q1W2 868 aaKnown RBP11.88□□□□□ -0.51
NUDCD3-210ENST00000493613 SPRED2Q7Z698 418 aa11.88□□□□□ -0.51
NUDCD3-210ENST00000493613 CATIPQ7Z7H3 387 aa11.88□□□□□ -0.51
NUDCD3-210ENST00000493613 GPKOWQ92917 476 aaPredicted RBP eCLIP11.88□□□□□ -0.51
NUDCD3-210ENST00000493613 C16orf70Q9BSU1 422 aa11.88□□□□□ -0.51
NUDCD3-210ENST00000493613 TUT1Q9H6E5 874 aaKnown RBP11.88□□□□□ -0.51
NUDCD3-210ENST00000493613 KIAA1671Q9BY89 1806 aa11.88□□□□□ -0.51
NUDCD3-210ENST00000493613 EMSYQ7Z589 1322 aa11.87□□□□□ -0.51
NUDCD3-210ENST00000493613 NOP56O00567 594 aaKnown RBP11.87□□□□□ -0.51
NUDCD3-210ENST00000493613 SGSM2O43147 1006 aa11.87□□□□□ -0.51
NUDCD3-210ENST00000493613 STAM2O75886 525 aa11.87□□□□□ -0.51
NUDCD3-210ENST00000493613 GJB5O95377 273 aa11.87□□□□□ -0.51
NUDCD3-210ENST00000493613 BMP1P13497 986 aa11.87□□□□□ -0.51
NUDCD3-210ENST00000493613 KCNQ1P51787 676 aa11.87□□□□□ -0.51
NUDCD3-210ENST00000493613 GRB10Q13322 594 aa11.87□□□□□ -0.51
NUDCD3-210ENST00000493613 MBTPS1Q14703 1052 aa11.87□□□□□ -0.51
NUDCD3-210ENST00000493613 GNPTABQ3T906 1256 aa11.87□□□□□ -0.51
NUDCD3-210ENST00000493613 TRAF7Q6Q0C0 670 aa11.87□□□□□ -0.51
NUDCD3-210ENST00000493613 SERINC5Q86VE9 423 aa11.87□□□□□ -0.51
NUDCD3-210ENST00000493613 PIBF1Q8WXW3 757 aa11.87□□□□□ -0.51
NUDCD3-210ENST00000493613 BCAS3Q9H6U6 928 aa11.87□□□□□ -0.51
NUDCD3-210ENST00000493613 FRMPD4Q14CM0 1322 aa11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 C17orf102A2RUQ5 167 aa11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 RSPH10B2B2RC85 870 aa11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 RBAK-RBAKDNI3L0D1 243 aa11.86□□□□□ -0.51
NUDCD3-210ENST00000493613 LPXNO60711 386 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms