RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 PDE8AO60658 829 aa8.35□□□□□ -1.07
SMG7-208ENST00000493609 KPNA6O60684 536 aa8.35□□□□□ -1.07
SMG7-208ENST00000493609 MPOP05164 745 aa8.35□□□□□ -1.07
SMG7-208ENST00000493609 GNAT1P11488 350 aa8.35□□□□□ -1.07
SMG7-208ENST00000493609 RAB3GAP1Q15042 981 aa8.35□□□□□ -1.07
SMG7-208ENST00000493609 PCBP1Q15365 356 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMG7-208ENST00000493609 PIK3R6Q5UE93 754 aa8.35□□□□□ -1.07
SMG7-208ENST00000493609 CDCA2Q69YH5 1023 aaPredicted RBP8.35□□□□□ -1.07
SMG7-208ENST00000493609 C16orf59Q7L2K0 433 aa8.35□□□□□ -1.07
SMG7-208ENST00000493609 THNSL2Q86YJ6 484 aa8.35□□□□□ -1.07
SMG7-208ENST00000493609 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMG7-208ENST00000493609 IFT57Q9NWB7 429 aa8.35□□□□□ -1.07
SMG7-208ENST00000493609 PRKAB1Q9Y478 270 aa8.35□□□□□ -1.07
SMG7-208ENST00000493609 GSG1L2A8MUP6 293 aa8.34□□□□□ -1.07
SMG7-208ENST00000493609 B4E1Z4 1266 aa8.34□□□□□ -1.07
SMG7-208ENST00000493609 SRGAP3O43295 1099 aa8.34□□□□□ -1.07
SMG7-208ENST00000493609 GLRX3O76003 335 aaKnown RBP8.34□□□□□ -1.07
SMG7-208ENST00000493609 CYBBP04839 570 aa8.34□□□□□ -1.07
SMG7-208ENST00000493609 CFAP100Q494V2 611 aa8.34□□□□□ -1.07
SMG7-208ENST00000493609 FAM47CQ5HY64 1035 aa8.34□□□□□ -1.07
SMG7-208ENST00000493609 RNF187Q5TA31 235 aaPredicted RBP8.34□□□□□ -1.07
SMG7-208ENST00000493609 PAQR3Q6TCH7 311 aa8.34□□□□□ -1.07
SMG7-208ENST00000493609 RPTNQ6XPR3 784 aa8.34□□□□□ -1.07
SMG7-208ENST00000493609 OTOP3Q7RTS5 596 aa8.34□□□□□ -1.07
SMG7-208ENST00000493609 OSTM1Q86WC4 334 aa8.34□□□□□ -1.07
SMG7-208ENST00000493609 CISD2Q8N5K1 135 aaKnown RBP8.34□□□□□ -1.07
SMG7-208ENST00000493609 UBR7Q8N806 425 aa8.34□□□□□ -1.07
SMG7-208ENST00000493609 NETO2Q8NC67 525 aa8.34□□□□□ -1.07
SMG7-208ENST00000493609 CELF4Q9BZC1 486 aaKnown RBP8.34□□□□□ -1.07
SMG7-208ENST00000493609 MTFR1LQ9H019 292 aa8.34□□□□□ -1.07
SMG7-208ENST00000493609 SPC25Q9HBM1 224 aa8.34□□□□□ -1.07
SMG7-208ENST00000493609 KLHL14Q9P2G3 628 aa8.34□□□□□ -1.07
SMG7-208ENST00000493609 OR14I1A6ND48 311 aa8.33□□□□□ -1.08
SMG7-208ENST00000493609 M0R2C6 588 aa8.33□□□□□ -1.08
SMG7-208ENST00000493609 SGSM2O43147 1006 aa8.33□□□□□ -1.08
SMG7-208ENST00000493609 DNAJC6O75061 913 aa8.33□□□□□ -1.08
SMG7-208ENST00000493609 PDE6AP16499 860 aa8.33□□□□□ -1.08
SMG7-208ENST00000493609 FLT3P36888 993 aa8.33□□□□□ -1.08
SMG7-208ENST00000493609 RBM10P98175 930 aaKnown RBP8.33□□□□□ -1.08
SMG7-208ENST00000493609 SPIRE1Q08AE8 756 aa8.33□□□□□ -1.08
SMG7-208ENST00000493609 STEAP3Q658P3 488 aa8.33□□□□□ -1.08
SMG7-208ENST00000493609 MPZL3Q6UWV2 235 aa8.33□□□□□ -1.08
SMG7-208ENST00000493609 UBE2R2Q712K3 238 aaPredicted RBP8.33□□□□□ -1.08
SMG7-208ENST00000493609 DDX53Q86TM3 631 aaKnown RBP8.33□□□□□ -1.08
SMG7-208ENST00000493609 WNK4Q96J92 1243 aa8.33□□□□□ -1.08
SMG7-208ENST00000493609 DBR1Q9UK59 544 aaKnown RBP8.33□□□□□ -1.08
SMG7-208ENST00000493609 TCRBV5S4A2TA0A5A2 114 aa8.32□□□□□ -1.08
SMG7-208ENST00000493609 GSTA4O15217 222 aa8.32□□□□□ -1.08
SMG7-208ENST00000493609 KRT15P19012 456 aa8.32□□□□□ -1.08
SMG7-208ENST00000493609 PRR5P85299 388 aa8.32□□□□□ -1.08
SMG7-208ENST00000493609 NR1I3Q14994 352 aa8.32□□□□□ -1.08
SMG7-208ENST00000493609 CRY1Q16526 586 aa8.32□□□□□ -1.08
SMG7-208ENST00000493609 TMEM177Q53S58 311 aa8.32□□□□□ -1.08
SMG7-208ENST00000493609 HABP4Q5JVS0 413 aaKnown RBP8.32□□□□□ -1.08
SMG7-208ENST00000493609 OVCH1Q7RTY7 1134 aa8.32□□□□□ -1.08
SMG7-208ENST00000493609 DCP2Q8IU60 420 aaKnown RBP8.32□□□□□ -1.08
SMG7-208ENST00000493609 RBM12BQ8IXT5 1001 aaKnown RBP8.32□□□□□ -1.08
SMG7-208ENST00000493609 KRTAP4-2Q9BYR5 136 aa8.32□□□□□ -1.08
SMG7-208ENST00000493609 SLC6A20Q9NP91 592 aa8.32□□□□□ -1.08
SMG7-208ENST00000493609 HGSO14964 777 aaPredicted RBP8.31□□□□□ -1.08
SMG7-208ENST00000493609 AMY2AP04746 511 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 AMY2BP19961 511 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 POU3F2P20265 443 aaPredicted RBP8.31□□□□□ -1.08
SMG7-208ENST00000493609 STAT3P40763 770 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 SLC6A11P48066 632 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 JAM2P57087 298 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 PKN3Q6P5Z2 889 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 ARHGAP36Q6ZRI8 547 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 RNF180Q86T96 592 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 IRF2BP1Q8IU81 584 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 PPM1KQ8N3J5 372 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 SH3RF2Q8TEC5 729 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 LEO1Q8WVC0 666 aaPredicted RBP8.31□□□□□ -1.08
SMG7-208ENST00000493609 SEC14L1Q92503 715 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 PEX11GQ96HA9 241 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 DIRC2Q96SL1 478 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 AP5M1Q9H0R1 490 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 BCAS3Q9H6U6 928 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 KCNK12Q9HB15 430 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.31□□□□□ -1.08
SMG7-208ENST00000493609 NUDT5Q9UKK9 219 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 PALD1Q9ULE6 856 aa8.31□□□□□ -1.08
SMG7-208ENST00000493609 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.31□□□□□ -1.08
SMG7-208ENST00000493609 KRIT1O00522 736 aa8.3□□□□□ -1.08
SMG7-208ENST00000493609 KCNK3O14649 394 aa8.3□□□□□ -1.08
SMG7-208ENST00000493609 SLC27A2O14975 620 aa8.3□□□□□ -1.08
SMG7-208ENST00000493609 NPTXRO95502 500 aa8.3□□□□□ -1.08
SMG7-208ENST00000493609 GPR19Q15760 415 aa8.3□□□□□ -1.08
SMG7-208ENST00000493609 SEPT7Q16181 437 aaKnown RBP8.3□□□□□ -1.08
SMG7-208ENST00000493609 SKOR2Q2VWA4 1001 aaPredicted RBP8.3□□□□□ -1.08
SMG7-208ENST00000493609 PLEKHN1Q494U1 663 aaPredicted RBP8.3□□□□□ -1.08
SMG7-208ENST00000493609 ZNF648Q5T619 568 aaPredicted RBP8.3□□□□□ -1.08
SMG7-208ENST00000493609 PRR23BQ6ZRT6 265 aa8.3□□□□□ -1.08
SMG7-208ENST00000493609 MILR1Q7Z6M3 343 aa8.3□□□□□ -1.08
SMG7-208ENST00000493609 ZNF605Q86T29 641 aa8.3□□□□□ -1.08
SMG7-208ENST00000493609 PTRH1Q86Y79 214 aaKnown RBP8.3□□□□□ -1.08
SMG7-208ENST00000493609 SMURF1Q9HCE7 757 aa8.3□□□□□ -1.08
SMG7-208ENST00000493609 DSEQ9UL01 958 aa8.3□□□□□ -1.08
SMG7-208ENST00000493609 MAPRE3Q9UPY8 281 aa8.3□□□□□ -1.08
SMG7-208ENST00000493609 TRAF5O00463 557 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms