RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 NEDD4P46934 1319 aa20.62■□□□□ 0.89
NUP50-218ENST00000493456 NR3C2P08235 984 aa20.62■□□□□ 0.89
NUP50-218ENST00000493456 SSTR3P32745 418 aaPredicted RBP20.62■□□□□ 0.89
NUP50-218ENST00000493456 PDE1AP54750 535 aa20.62■□□□□ 0.89
NUP50-218ENST00000493456 MFAP1P55081 439 aaKnown RBP20.62■□□□□ 0.89
NUP50-218ENST00000493456 HTRA4P83105 476 aaPredicted RBP20.62■□□□□ 0.89
NUP50-218ENST00000493456 MKRN4PQ13434 485 aaPredicted RBP20.62■□□□□ 0.89
NUP50-218ENST00000493456 TIGD5Q53EQ6 642 aa20.62■□□□□ 0.89
NUP50-218ENST00000493456 PTCRAQ6ISU1 281 aaPredicted RBP20.62■□□□□ 0.89
NUP50-218ENST00000493456 KCNV1Q6PIU1 500 aa20.62■□□□□ 0.89
NUP50-218ENST00000493456 FBXO11Q86XK2 927 aa20.62■□□□□ 0.89
NUP50-218ENST00000493456 SP7Q8TDD2 431 aaPredicted RBP20.62■□□□□ 0.89
NUP50-218ENST00000493456 WNT8BQ93098 351 aa20.62■□□□□ 0.89
NUP50-218ENST00000493456 ZKSCAN3Q9BRR0 538 aa20.62■□□□□ 0.89
NUP50-218ENST00000493456 C17orf80Q9BSJ5 609 aa20.62■□□□□ 0.89
NUP50-218ENST00000493456 KAT14Q9H8E8 782 aa20.62■□□□□ 0.89
NUP50-218ENST00000493456 PPFIA4O75335 1185 aa20.61■□□□□ 0.89
NUP50-218ENST00000493456 IL9P15248 144 aa20.61■□□□□ 0.89
NUP50-218ENST00000493456 NMIQ13287 307 aaPredicted RBP20.61■□□□□ 0.89
NUP50-218ENST00000493456 QRICH1Q2TAL8 776 aa20.61■□□□□ 0.89
NUP50-218ENST00000493456 ANKRD45Q5TZF3 282 aa20.61■□□□□ 0.89
NUP50-218ENST00000493456 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.61■□□□□ 0.89
NUP50-218ENST00000493456 SERINC5Q86VE9 423 aa20.61■□□□□ 0.89
NUP50-218ENST00000493456 MYOCDQ8IZQ8 938 aa20.61■□□□□ 0.89
NUP50-218ENST00000493456 COL4A6Q14031 1691 aa20.61■□□□□ 0.89
NUP50-218ENST00000493456 GRXCR2A6NFK2 248 aa20.6■□□□□ 0.89
NUP50-218ENST00000493456 RSPH10B2B2RC85 870 aa20.6■□□□□ 0.89
NUP50-218ENST00000493456 RSPH10BP0C881 870 aa20.6■□□□□ 0.89
NUP50-218ENST00000493456 DBF4BQ8NFT6 615 aa20.6■□□□□ 0.89
NUP50-218ENST00000493456 NEK9Q8TD19 979 aa20.6■□□□□ 0.89
NUP50-218ENST00000493456 ANKS1AQ92625 1134 aa20.6■□□□□ 0.89
NUP50-218ENST00000493456 MICAL3Q7RTP6 2002 aa20.6■□□□□ 0.89
NUP50-218ENST00000493456 TRIOO75962 3097 aa20.59■□□□□ 0.89
NUP50-218ENST00000493456 ZNF213O14771 459 aa20.59■□□□□ 0.89
NUP50-218ENST00000493456 DHX16O60231 1041 aaKnown RBP20.59■□□□□ 0.89
NUP50-218ENST00000493456 CFBP00751 764 aa20.59■□□□□ 0.89
NUP50-218ENST00000493456 THPOP40225 353 aa20.59■□□□□ 0.89
NUP50-218ENST00000493456 HSD17B4P51659 736 aa20.59■□□□□ 0.89
NUP50-218ENST00000493456 ZNF200P98182 395 aaPredicted RBP20.59■□□□□ 0.89
NUP50-218ENST00000493456 GHRHRQ02643 423 aa20.59■□□□□ 0.89
NUP50-218ENST00000493456 EPC2Q52LR7 807 aa20.59■□□□□ 0.89
NUP50-218ENST00000493456 PLEKHG4Q58EX7 1191 aa20.59■□□□□ 0.89
NUP50-218ENST00000493456 MYSM1Q5VVJ2 828 aa20.59■□□□□ 0.89
NUP50-218ENST00000493456 SPATA33Q96N06 139 aa20.59■□□□□ 0.89
NUP50-218ENST00000493456 MAP3K20Q9NYL2 800 aaKnown RBP20.59■□□□□ 0.89
NUP50-218ENST00000493456 FAM50BQ9Y247 325 aa20.59■□□□□ 0.89
NUP50-218ENST00000493456 LAMA4Q16363 1823 aa20.59■□□□□ 0.89
NUP50-218ENST00000493456 C5orf42Q9H799 3197 aa20.58■□□□□ 0.89
NUP50-218ENST00000493456 PARP1P09874 1014 aaKnown RBP20.58■□□□□ 0.89
NUP50-218ENST00000493456 CSPP1Q1MSJ5 1256 aa20.58■□□□□ 0.89
NUP50-218ENST00000493456 CELF3Q5SZQ8 465 aaKnown RBP20.58■□□□□ 0.89
NUP50-218ENST00000493456 PDCD2LQ9BRP1 358 aa20.58■□□□□ 0.89
NUP50-218ENST00000493456 JMJD4Q9H9V9 463 aa20.58■□□□□ 0.89
NUP50-218ENST00000493456 H3BNC9 293 aa20.57■□□□□ 0.88
NUP50-218ENST00000493456 CAND2O75155 1236 aa20.57■□□□□ 0.88
NUP50-218ENST00000493456 KDM4AO75164 1064 aa20.57■□□□□ 0.88
NUP50-218ENST00000493456 TGFB3P10600 412 aa20.57■□□□□ 0.88
NUP50-218ENST00000493456 HSDL1Q3SXM5 330 aa20.57■□□□□ 0.88
NUP50-218ENST00000493456 SAMD3Q8N6K7 520 aa20.57■□□□□ 0.88
NUP50-218ENST00000493456 BANK1Q8NDB2 785 aa20.57■□□□□ 0.88
NUP50-218ENST00000493456 PABPC5Q96DU9 382 aaKnown RBP20.57■□□□□ 0.88
NUP50-218ENST00000493456 ZSCAN10Q96SZ4 725 aaPredicted RBP20.57■□□□□ 0.88
NUP50-218ENST00000493456 YME1L1Q96TA2 773 aa20.57■□□□□ 0.88
NUP50-218ENST00000493456 AMNQ9BXJ7 453 aa20.57■□□□□ 0.88
NUP50-218ENST00000493456 MYH6P13533 1939 aa20.57■□□□□ 0.88
NUP50-218ENST00000493456 C17orf102A2RUQ5 167 aa20.56■□□□□ 0.88
NUP50-218ENST00000493456 TRIM6-TRIM34B2RNG4 842 aa20.56■□□□□ 0.88
NUP50-218ENST00000493456 DCXO43602 365 aa20.56■□□□□ 0.88
NUP50-218ENST00000493456 RGS20O76081 388 aa20.56■□□□□ 0.88
NUP50-218ENST00000493456 GGPS1O95749 300 aa20.56■□□□□ 0.88
NUP50-218ENST00000493456 HOXC8P31273 242 aa20.56■□□□□ 0.88
NUP50-218ENST00000493456 HIC1Q14526 733 aa20.56■□□□□ 0.88
NUP50-218ENST00000493456 STOX1Q6ZVD7 989 aa20.56■□□□□ 0.88
NUP50-218ENST00000493456 ENAHQ8N8S7 591 aaPredicted RBP20.56■□□□□ 0.88
NUP50-218ENST00000493456 SEPT8Q92599 483 aa20.56■□□□□ 0.88
NUP50-218ENST00000493456 ATP6V0A1Q93050 837 aa20.56■□□□□ 0.88
NUP50-218ENST00000493456 TOP1MTQ969P6 601 aa20.56■□□□□ 0.88
NUP50-218ENST00000493456 C16orf70Q9BSU1 422 aa20.56■□□□□ 0.88
NUP50-218ENST00000493456 PRKAG3Q9UGI9 489 aa20.56■□□□□ 0.88
NUP50-218ENST00000493456 MYH7BA7E2Y1 1941 aa20.55■□□□□ 0.88
NUP50-218ENST00000493456 H3BQ06 376 aaPredicted RBP20.55■□□□□ 0.88
NUP50-218ENST00000493456 OPLAHO14841 1288 aa20.55■□□□□ 0.88
NUP50-218ENST00000493456 MYCLP12524 364 aaPredicted RBP20.55■□□□□ 0.88
NUP50-218ENST00000493456 UBA1P22314 1058 aaKnown RBP20.55■□□□□ 0.88
NUP50-218ENST00000493456 COL19A1Q14993 1142 aa20.55■□□□□ 0.88
NUP50-218ENST00000493456 ALYREFQ86V81 257 aaKnown RBP20.55■□□□□ 0.88
NUP50-218ENST00000493456 VSIG10LQ86VR7 867 aa20.55■□□□□ 0.88
NUP50-218ENST00000493456 UIMC1Q96RL1 719 aa20.55■□□□□ 0.88
NUP50-218ENST00000493456 KCNH6Q9H252 994 aa20.55■□□□□ 0.88
NUP50-218ENST00000493456 NSUN3Q9H649 340 aaKnown RBP20.55■□□□□ 0.88
NUP50-218ENST00000493456 VAT1LQ9HCJ6 419 aa20.55■□□□□ 0.88
NUP50-218ENST00000493456 H3BRB1 525 aa20.54■□□□□ 0.88
NUP50-218ENST00000493456 GPM6BQ13491 265 aa20.54■□□□□ 0.88
NUP50-218ENST00000493456 PGM5Q15124 567 aa20.54■□□□□ 0.88
NUP50-218ENST00000493456 TMEM192Q8IY95 271 aa20.54■□□□□ 0.88
NUP50-218ENST00000493456 APBB2Q92870 758 aa20.54■□□□□ 0.88
NUP50-218ENST00000493456 TUT1Q9H6E5 874 aaKnown RBP20.54■□□□□ 0.88
NUP50-218ENST00000493456 MLXIPQ9HAP2 919 aa20.54■□□□□ 0.88
NUP50-218ENST00000493456 B4E1Z4 1266 aa20.53■□□□□ 0.88
NUP50-218ENST00000493456 NCK2O43639 380 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms