RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 SLC12A6Q9UHW9 1150 aa17.71■□□□□ 0.43
BRAT1-206ENST00000493232 RWDD2AQ9UIY3 292 aa17.71■□□□□ 0.43
BRAT1-206ENST00000493232 PPARDQ03181 441 aa17.71■□□□□ 0.42
BRAT1-206ENST00000493232 TRIM42Q8IWZ5 723 aa17.71■□□□□ 0.42
BRAT1-206ENST00000493232 PSAPP07602 524 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 LIFRP42702 1097 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 PDE1BQ01064 536 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 RNF14Q9UBS8 474 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 FAN1Q9Y2M0 1017 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 ERBB3P21860 1342 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 TTC36A6NLP5 189 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 SGK1O00141 431 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 GRAPQ13588 217 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 FOXP4Q8IVH2 680 aaPredicted RBP17.7■□□□□ 0.42
BRAT1-206ENST00000493232 GRAPLQ8TC17 118 aaPredicted RBP17.7■□□□□ 0.42
BRAT1-206ENST00000493232 LRFN2Q9ULH4 789 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 ZNF853P0CG23 659 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 XPAP23025 273 aaPredicted RBP17.7■□□□□ 0.42
BRAT1-206ENST00000493232 RAB44Q7Z6P3 723 aaPredicted RBP17.7■□□□□ 0.42
BRAT1-206ENST00000493232 ANKRD13CQ8N6S4 541 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.7■□□□□ 0.42
BRAT1-206ENST00000493232 FAM149B1Q96BN6 582 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 STK38LQ9Y2H1 464 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 NPR1P16066 1061 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 SLC16A2P36021 539 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 ASPHQ12797 758 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 TRMT2AQ8IZ69 625 aaKnown RBP17.7■□□□□ 0.42
BRAT1-206ENST00000493232 LINC00301Q8NCQ3 95 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 Q9H521 79 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 THAP9Q9H5L6 903 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 RCOR1Q9UKL0 485 aa17.7■□□□□ 0.42
BRAT1-206ENST00000493232 HIP1RO75146 1068 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 IL9RQ01113 521 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 JADE1Q6IE81 842 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 CCHCR1Q8TD31 782 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 HDAC11Q96DB2 347 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 ERVK-7P63135 1459 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 GPC4O75487 556 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 KRT10P13645 584 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 ZSCAN20P17040 1043 aaPredicted RBP17.69■□□□□ 0.42
BRAT1-206ENST00000493232 C4orf50Q6ZRC1 276 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 UNC5CLQ8IV45 518 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 COA1Q9GZY4 146 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 ANTXR1Q9H6X2 564 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 PARVGQ9HBI0 331 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 ARL4AP40617 200 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 MYO1EQ12965 1108 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 KRT27Q7Z3Y8 459 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 SLC38A10Q9HBR0 1119 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 MCF2LO15068 1137 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 PKP1Q13835 747 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 DIXDC1Q155Q3 683 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 ZSCAN26Q16670 478 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 GBP7Q8N8V2 638 aaPredicted RBP17.69■□□□□ 0.42
BRAT1-206ENST00000493232 DAAM1Q9Y4D1 1078 aa17.69■□□□□ 0.42
BRAT1-206ENST00000493232 PGRMC1O00264 195 aaKnown RBP17.68■□□□□ 0.42
BRAT1-206ENST00000493232 CCNE1P24864 410 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 RXRBP28702 533 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 MUM1Q2TAK8 710 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 NAA35Q5VZE5 725 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 UGGT1Q9NYU2 1555 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.68■□□□□ 0.42
BRAT1-206ENST00000493232 IREB2P48200 963 aaKnown RBP17.68■□□□□ 0.42
BRAT1-206ENST00000493232 SF3A3Q12874 501 aaKnown RBP eCLIP17.68■□□□□ 0.428e-8■■■■□ 20.8
BRAT1-206ENST00000493232 DNAJC24Q6P3W2 148 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 RTKN2Q8IZC4 609 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 PPP1R13BQ96KQ4 1090 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 BSDC1Q9NW68 430 aaPredicted RBP17.68■□□□□ 0.42
BRAT1-206ENST00000493232 CPSF2Q9P2I0 782 aaKnown RBP17.68■□□□□ 0.42
BRAT1-206ENST00000493232 MAGI2Q86UL8 1455 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 PNMA6FA0A0J9YX94 578 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 USP17L3A6NCW0 530 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 USP17L4A6NCW7 530 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 SAT1P21673 171 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 PPP4R3CPQ6ZMV5 832 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 USP17L1Q7RTZ2 530 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 MAN1B1Q9UKM7 699 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 SRPRBQ9Y5M8 271 aaKnown RBP17.68■□□□□ 0.42
BRAT1-206ENST00000493232 PRKAB2O43741 272 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 ATP1A2P50993 1020 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 CUL4AQ13619 759 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 SLC35F6Q8N357 371 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 ENOX1Q8TC92 643 aaKnown RBP17.68■□□□□ 0.42
BRAT1-206ENST00000493232 PI4K2BQ8TCG2 481 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 EMILIN3Q9NT22 766 aa17.68■□□□□ 0.42
BRAT1-206ENST00000493232 ECEL1O95672 775 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 KPNA2P52292 529 aaKnown RBP17.67■□□□□ 0.42
BRAT1-206ENST00000493232 PTPN12Q05209 780 aaKnown RBP17.67■□□□□ 0.42
BRAT1-206ENST00000493232 RNASELQ05823 741 aaKnown RBP17.67■□□□□ 0.42
BRAT1-206ENST00000493232 LRRC41Q15345 812 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 ARL6IP4Q66PJ3 421 aaKnown RBP17.67■□□□□ 0.42
BRAT1-206ENST00000493232 SDCCAG3Q96C92 435 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 TFAMQ00059 246 aaKnown RBP17.67■□□□□ 0.42
BRAT1-206ENST00000493232 RBL2Q08999 1139 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 OSBP2Q969R2 916 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 PUS7LQ9H0K6 701 aaKnown RBP17.67■□□□□ 0.42
BRAT1-206ENST00000493232 SH3GLB2Q9NR46 395 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 MYO5CQ9NQX4 1742 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 TTC37Q6PGP7 1564 aa17.67■□□□□ 0.42
BRAT1-206ENST00000493232 SART1O43290 800 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms