RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 HYAL1Q12794 435 aa14.18□□□□□ -0.14
GPNMB-214ENST00000492858 SMAD4Q13485 552 aaKnown RBP14.18□□□□□ -0.14
GPNMB-214ENST00000492858 PKN1Q16512 942 aa14.18□□□□□ -0.14
GPNMB-214ENST00000492858 PLEKHG4Q58EX7 1191 aa14.18□□□□□ -0.14
GPNMB-214ENST00000492858 TSHZ3Q63HK5 1081 aa14.18□□□□□ -0.14
GPNMB-214ENST00000492858 TOP1MTQ969P6 601 aa14.18□□□□□ -0.14
GPNMB-214ENST00000492858 ZBTB40Q9NUA8 1239 aa14.18□□□□□ -0.14
GPNMB-214ENST00000492858 DMDP11532 3685 aa14.18□□□□□ -0.14
GPNMB-214ENST00000492858 VPS13AQ96RL7 3174 aa14.18□□□□□ -0.14
GPNMB-214ENST00000492858 HAS3O00219 553 aa14.17□□□□□ -0.14
GPNMB-214ENST00000492858 CTNNB1P35222 781 aa14.17□□□□□ -0.14
GPNMB-214ENST00000492858 NOVP48745 357 aa14.17□□□□□ -0.14
GPNMB-214ENST00000492858 HIC1Q14526 733 aa14.17□□□□□ -0.14
GPNMB-214ENST00000492858 USH1GQ495M9 461 aa14.17□□□□□ -0.14
GPNMB-214ENST00000492858 SEPT8Q92599 483 aa14.17□□□□□ -0.14
GPNMB-214ENST00000492858 IFIH1Q9BYX4 1025 aaKnown RBP14.17□□□□□ -0.14
GPNMB-214ENST00000492858 MYO7AQ13402 2215 aa14.17□□□□□ -0.14
GPNMB-214ENST00000492858 WDR19Q8NEZ3 1342 aa14.16□□□□□ -0.14
GPNMB-214ENST00000492858 CACNA1AO00555 2505 aa14.16□□□□□ -0.14
GPNMB-214ENST00000492858 MICAL3Q7RTP6 2002 aa14.16□□□□□ -0.14
GPNMB-214ENST00000492858 TBX10O75333 385 aa14.16□□□□□ -0.14
GPNMB-214ENST00000492858 CSPG5O95196 566 aa14.16□□□□□ -0.14
GPNMB-214ENST00000492858 GTF2F1P35269 517 aaKnown RBP eCLIP14.16□□□□□ -0.14
GPNMB-214ENST00000492858 FBXL6Q8N531 539 aa14.16□□□□□ -0.14
GPNMB-214ENST00000492858 EMID1Q96A84 441 aaPredicted RBP14.16□□□□□ -0.14
GPNMB-214ENST00000492858 GPATCH3Q96I76 525 aa14.16□□□□□ -0.14
GPNMB-214ENST00000492858 IGFLR1Q9H665 355 aa14.16□□□□□ -0.14
GPNMB-214ENST00000492858 CD207Q9UJ71 328 aa14.16□□□□□ -0.14
GPNMB-214ENST00000492858 DDX41Q9UJV9 622 aaKnown RBP14.16□□□□□ -0.14
GPNMB-214ENST00000492858 DCHS1Q96JQ0 3298 aa14.16□□□□□ -0.14
GPNMB-214ENST00000492858 COL4A6Q14031 1691 aa14.15□□□□□ -0.14
GPNMB-214ENST00000492858 GRM6O15303 877 aa14.15□□□□□ -0.14
GPNMB-214ENST00000492858 LINC01565O15544 149 aa14.15□□□□□ -0.14
GPNMB-214ENST00000492858 PDHBP11177 359 aa14.15□□□□□ -0.14
GPNMB-214ENST00000492858 TOP1P11387 765 aaKnown RBP14.15□□□□□ -0.14
GPNMB-214ENST00000492858 ZXDAP98168 799 aa14.15□□□□□ -0.14
GPNMB-214ENST00000492858 STXBP2Q15833 593 aa14.15□□□□□ -0.14
GPNMB-214ENST00000492858 SERINC5Q86VE9 423 aa14.15□□□□□ -0.14
GPNMB-214ENST00000492858 RGS22Q8NE09 1264 aa14.15□□□□□ -0.14
GPNMB-214ENST00000492858 PPTC7Q8NI37 304 aa14.15□□□□□ -0.14
GPNMB-214ENST00000492858 NSUN6Q8TEA1 469 aaKnown RBP14.15□□□□□ -0.14
GPNMB-214ENST00000492858 TAAR1Q96RJ0 339 aa14.15□□□□□ -0.14
GPNMB-214ENST00000492858 TMEM47Q9BQJ4 181 aa14.15□□□□□ -0.14
GPNMB-214ENST00000492858 C11orf84Q9BUA3 381 aaPredicted RBP14.15□□□□□ -0.14
GPNMB-214ENST00000492858 LMAN2LQ9H0V9 348 aa14.15□□□□□ -0.14
GPNMB-214ENST00000492858 DDX19BQ9UMR2 479 aa14.15□□□□□ -0.14
GPNMB-214ENST00000492858 MRVI1Q9Y6F6 885 aa14.15□□□□□ -0.14
GPNMB-214ENST00000492858 SPTBN4Q9H254 2564 aa14.14□□□□□ -0.15
GPNMB-214ENST00000492858 CACNA1HO95180 2353 aa14.14□□□□□ -0.15
GPNMB-214ENST00000492858 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.14□□□□□ -0.15
GPNMB-214ENST00000492858 RB1P06400 928 aa14.14□□□□□ -0.15
GPNMB-214ENST00000492858 LAMC2Q13753 1193 aa14.14□□□□□ -0.15
GPNMB-214ENST00000492858 FIBCD1Q8N539 461 aa14.14□□□□□ -0.15
GPNMB-214ENST00000492858 SYTL5Q8TDW5 730 aaPredicted RBP14.14□□□□□ -0.15
GPNMB-214ENST00000492858 TBC1D5Q92609 795 aa14.14□□□□□ -0.15
GPNMB-214ENST00000492858 ATOH1Q92858 354 aaPredicted RBP14.14□□□□□ -0.15
GPNMB-214ENST00000492858 IL17RAQ96F46 866 aa14.14□□□□□ -0.15
GPNMB-214ENST00000492858 RMDN3Q96TC7 470 aa14.14□□□□□ -0.15
GPNMB-214ENST00000492858 OSBPL7Q9BZF2 842 aa14.14□□□□□ -0.15
GPNMB-214ENST00000492858 TOMM22Q9NS69 142 aa14.14□□□□□ -0.15
GPNMB-214ENST00000492858 COL20A1Q9P218 1284 aa14.14□□□□□ -0.15
GPNMB-214ENST00000492858 C5orf67F2Z3F1 127 aa14.13□□□□□ -0.15
GPNMB-214ENST00000492858 FOXP2O15409 715 aa14.13□□□□□ -0.15
GPNMB-214ENST00000492858 SORBS3O60504 671 aa14.13□□□□□ -0.15
GPNMB-214ENST00000492858 CTSHP09668 335 aa14.13□□□□□ -0.15
GPNMB-214ENST00000492858 MS4A1P11836 297 aa14.13□□□□□ -0.15
GPNMB-214ENST00000492858 BMPR1AP36894 532 aa14.13□□□□□ -0.15
GPNMB-214ENST00000492858 NDUFV1P49821 464 aa14.13□□□□□ -0.15
GPNMB-214ENST00000492858 VCPP55072 806 aaKnown RBP14.13□□□□□ -0.15
GPNMB-214ENST00000492858 ZNF543Q08ER8 600 aa14.13□□□□□ -0.15
GPNMB-214ENST00000492858 ATP6V0A1Q93050 837 aa14.13□□□□□ -0.15
GPNMB-214ENST00000492858 IWS1Q96ST2 819 aa14.13□□□□□ -0.15
GPNMB-214ENST00000492858 ALG13Q9NP73 1137 aaKnown RBP14.13□□□□□ -0.15
GPNMB-214ENST00000492858 C17orf102A2RUQ5 167 aa14.12□□□□□ -0.15
GPNMB-214ENST00000492858 ORC4O43929 436 aa14.12□□□□□ -0.15
GPNMB-214ENST00000492858 EYA4O95677 639 aa14.12□□□□□ -0.15
GPNMB-214ENST00000492858 LINC00271P0C7V0 271 aa14.12□□□□□ -0.15
GPNMB-214ENST00000492858 HOXD8P13378 290 aaPredicted RBP14.12□□□□□ -0.15
GPNMB-214ENST00000492858 EIF2AK2P19525 551 aaKnown RBP14.12□□□□□ -0.15
GPNMB-214ENST00000492858 RRP12Q5JTH9 1297 aaKnown RBP14.12□□□□□ -0.15
GPNMB-214ENST00000492858 ZMYM1Q5SVZ6 1142 aa14.12□□□□□ -0.15
GPNMB-214ENST00000492858 ARHGEF16Q5VV41 709 aa14.12□□□□□ -0.15
GPNMB-214ENST00000492858 MSLNLQ96KJ4 702 aa14.12□□□□□ -0.15
GPNMB-214ENST00000492858 IRF2BPLQ9H1B7 796 aa14.12□□□□□ -0.15
GPNMB-214ENST00000492858 ANAPC4Q9UJX5 808 aa14.12□□□□□ -0.15
GPNMB-214ENST00000492858 RWDD3Q9Y3V2 267 aa14.12□□□□□ -0.15
GPNMB-214ENST00000492858 LOC730098B7Z3J9 87 aa14.11□□□□□ -0.15
GPNMB-214ENST00000492858 CCER2I3L3R5 266 aa14.11□□□□□ -0.15
GPNMB-214ENST00000492858 PPFIA4O75335 1185 aa14.11□□□□□ -0.15
GPNMB-214ENST00000492858 EIF3JO75822 258 aaKnown RBP14.11□□□□□ -0.15
GPNMB-214ENST00000492858 PTPRZ1P23471 2315 aaPredicted RBP14.11□□□□□ -0.15
GPNMB-214ENST00000492858 ADAM15Q13444 863 aa14.11□□□□□ -0.15
GPNMB-214ENST00000492858 HSDL1Q3SXM5 330 aa14.11□□□□□ -0.15
GPNMB-214ENST00000492858 SPATA33Q96N06 139 aa14.11□□□□□ -0.15
GPNMB-214ENST00000492858 FSD1Q9BTV5 496 aa14.11□□□□□ -0.15
GPNMB-214ENST00000492858 CPVLQ9H3G5 476 aa14.11□□□□□ -0.15
GPNMB-214ENST00000492858 ADGRA3Q8IWK6 1321 aa14.11□□□□□ -0.15
GPNMB-214ENST00000492858 NLRC5Q86WI3 1866 aa14.1□□□□□ -0.15
GPNMB-214ENST00000492858 TREHO43280 583 aa14.1□□□□□ -0.15
GPNMB-214ENST00000492858 MMP1P03956 469 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms