RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 TAP1Q03518 808 aa10.59□□□□□ -0.71
HDAC3-212ENST00000492407 IKBKEQ14164 716 aa10.59□□□□□ -0.71
HDAC3-212ENST00000492407 MFSD10Q14728 455 aa10.59□□□□□ -0.71
HDAC3-212ENST00000492407 GRM4Q14833 912 aa10.59□□□□□ -0.71
HDAC3-212ENST00000492407 GPNMBQ14956 572 aa10.59□□□□□ -0.71
HDAC3-212ENST00000492407 SART3Q15020 963 aaKnown RBP10.59□□□□□ -0.71
HDAC3-212ENST00000492407 PGM5Q15124 567 aa10.59□□□□□ -0.71
HDAC3-212ENST00000492407 CCDC85BQ15834 202 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-212ENST00000492407 XRRA1Q6P2D8 792 aa10.59□□□□□ -0.71
HDAC3-212ENST00000492407 STAG2Q8N3U4 1231 aa10.59□□□□□ -0.71
HDAC3-212ENST00000492407 ADAMTS19Q8TE59 1207 aa10.59□□□□□ -0.71
HDAC3-212ENST00000492407 RAD9AQ99638 391 aa10.59□□□□□ -0.71
HDAC3-212ENST00000492407 HDAC6Q9UBN7 1215 aa10.59□□□□□ -0.71
HDAC3-212ENST00000492407 TLL1O43897 1013 aa10.58□□□□□ -0.72
HDAC3-212ENST00000492407 RGS20O76081 388 aa10.58□□□□□ -0.72
HDAC3-212ENST00000492407 BMP1P13497 986 aa10.58□□□□□ -0.72
HDAC3-212ENST00000492407 CCND2P30279 289 aa10.58□□□□□ -0.72
HDAC3-212ENST00000492407 HOXC8P31273 242 aa10.58□□□□□ -0.72
HDAC3-212ENST00000492407 ICAM3P32942 547 aa10.58□□□□□ -0.72
HDAC3-212ENST00000492407 WDR5P61964 334 aaKnown RBP10.58□□□□□ -0.72
HDAC3-212ENST00000492407 TROAPQ12815 778 aa10.58□□□□□ -0.72
HDAC3-212ENST00000492407 KIAA0753Q2KHM9 967 aa10.58□□□□□ -0.72
HDAC3-212ENST00000492407 TRIM71Q2Q1W2 868 aaKnown RBP10.58□□□□□ -0.72
HDAC3-212ENST00000492407 GNPTABQ3T906 1256 aa10.58□□□□□ -0.72
HDAC3-212ENST00000492407 TTC22Q5TAA0 569 aa10.58□□□□□ -0.72
HDAC3-212ENST00000492407 CHST3Q7LGC8 479 aa10.58□□□□□ -0.72
HDAC3-212ENST00000492407 NCOA7Q8NI08 942 aa10.58□□□□□ -0.72
HDAC3-212ENST00000492407 EXOC6Q8TAG9 804 aa10.58□□□□□ -0.72
HDAC3-212ENST00000492407 DHX38Q92620 1227 aaKnown RBP10.58□□□□□ -0.72
HDAC3-212ENST00000492407 SPATA33Q96N06 139 aa10.58□□□□□ -0.72
HDAC3-212ENST00000492407 UHRF1Q96T88 793 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-212ENST00000492407 CHD7Q9P2D1 2997 aa10.58□□□□□ -0.72
HDAC3-212ENST00000492407 TRANK1O15050 2925 aa10.57□□□□□ -0.72
HDAC3-212ENST00000492407 IFIT3O14879 490 aaKnown RBP10.57□□□□□ -0.72
HDAC3-212ENST00000492407 PPP1R11O60927 126 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-212ENST00000492407 NBNO60934 754 aa10.57□□□□□ -0.72
HDAC3-212ENST00000492407 GJB5O95377 273 aa10.57□□□□□ -0.72
HDAC3-212ENST00000492407 CYP21A2P08686 494 aa10.57□□□□□ -0.72
HDAC3-212ENST00000492407 NEDD9Q14511 834 aa10.57□□□□□ -0.72
HDAC3-212ENST00000492407 TRAF7Q6Q0C0 670 aa10.57□□□□□ -0.72
HDAC3-212ENST00000492407 CYB5R4Q7L1T6 521 aa10.57□□□□□ -0.72
HDAC3-212ENST00000492407 CATIPQ7Z7H3 387 aa10.57□□□□□ -0.72
HDAC3-212ENST00000492407 RALYLQ86SE5 291 aaKnown RBP10.57□□□□□ -0.72
HDAC3-212ENST00000492407 SERINC5Q86VE9 423 aa10.57□□□□□ -0.72
HDAC3-212ENST00000492407 TMTC2Q8N394 836 aa10.57□□□□□ -0.72
HDAC3-212ENST00000492407 NAP1L5Q96NT1 182 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-212ENST00000492407 LZTS2Q9BRK4 669 aa10.57□□□□□ -0.72
HDAC3-212ENST00000492407 C16orf70Q9BSU1 422 aa10.57□□□□□ -0.72
HDAC3-212ENST00000492407 ZBED2Q9BTP6 218 aa10.57□□□□□ -0.72
HDAC3-212ENST00000492407 USP26Q9BXU7 913 aa10.57□□□□□ -0.72
HDAC3-212ENST00000492407 MLXIPQ9HAP2 919 aa10.57□□□□□ -0.72
HDAC3-212ENST00000492407 FRMPD4Q14CM0 1322 aa10.57□□□□□ -0.72
HDAC3-212ENST00000492407 LAMA4Q16363 1823 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 C17orf102A2RUQ5 167 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 SPATA31C2B4DYI2 1134 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 PIK3CDO00329 1044 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 LGR5O75473 907 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 GGPS1O95749 300 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 GNAT1P11488 350 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 MYCLP12524 364 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-212ENST00000492407 UBA1P22314 1058 aaKnown RBP10.56□□□□□ -0.72
HDAC3-212ENST00000492407 CHMLP26374 656 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 CHMP4BP1P59074 171 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 ERVK-21P61565 698 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 WTAPQ15007 396 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 HSDL1Q3SXM5 330 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 TEX2Q8IWB9 1127 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 GIMAP8Q8ND71 665 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-212ENST00000492407 ARNTL2Q8WYA1 636 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 HLA-CQ95604 372 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 INPP4AQ96PE3 977 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-212ENST00000492407 PIGSQ96S52 555 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 SENP7Q9BQF6 1050 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 ALG1Q9BT22 464 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 INSL6Q9Y581 213 aa10.56□□□□□ -0.72
HDAC3-212ENST00000492407 RSPH10B2B2RC85 870 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 E7EWF7 191 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 H3BRB1 525 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 FIBPO43427 364 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 CYTH3O43739 400 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 DDAH1O94760 285 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 AMHP03971 560 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 RSPH10BP0C881 870 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 GSPT1P15170 499 aaKnown RBP10.55□□□□□ -0.72
HDAC3-212ENST00000492407 HOXA13P31271 388 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-212ENST00000492407 KIF5BP33176 963 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 GNAQP50148 359 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 SP2Q02086 613 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 GRB10Q13322 594 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 MKRN4PQ13434 485 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-212ENST00000492407 ZNF618Q5T7W0 954 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 METTL7BQ6UX53 244 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 FAM43BQ6ZT52 329 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-212ENST00000492407 IGDCC4Q8TDY8 1250 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 MAP4K1Q92918 833 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 SAMD11Q96NU1 681 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 TGS1Q96RS0 853 aaKnown RBP10.55□□□□□ -0.72
HDAC3-212ENST00000492407 SPZ1Q9BXG8 430 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 C1QTNF1Q9BXJ1 281 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 IL25Q9H293 177 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms