RNA–Protein interactions for RNA: ENST00000491282.5

SOX2-OT-212, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 882 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-212ENST00000491282 MTG1Q9BT17 334 aaPredicted RBP13.17□□□□□ -0.3
SOX2-OT-212ENST00000491282 TRPV6Q9H1D0 765 aa13.17□□□□□ -0.3
SOX2-OT-212ENST00000491282 ZSWIM6Q9HCJ5 1215 aa13.17□□□□□ -0.3
SOX2-OT-212ENST00000491282 WDR70Q9NW82 654 aa13.17□□□□□ -0.3
SOX2-OT-212ENST00000491282 RTEL1Q9NZ71 1219 aa13.17□□□□□ -0.3
SOX2-OT-212ENST00000491282 TBX21Q9UL17 535 aa13.17□□□□□ -0.3
SOX2-OT-212ENST00000491282 MYH6P13533 1939 aa13.17□□□□□ -0.3
SOX2-OT-212ENST00000491282 MROH7Q68CQ1 1323 aa13.16□□□□□ -0.3
SOX2-OT-212ENST00000491282 PIK3CDO00329 1044 aa13.16□□□□□ -0.3
SOX2-OT-212ENST00000491282 SOX1O00570 391 aaPredicted RBP13.16□□□□□ -0.3
SOX2-OT-212ENST00000491282 PPFIA3O75145 1194 aa13.16□□□□□ -0.3
SOX2-OT-212ENST00000491282 MRPS9P82933 396 aaKnown RBP13.16□□□□□ -0.3
SOX2-OT-212ENST00000491282 SP2Q02086 613 aa13.16□□□□□ -0.3
SOX2-OT-212ENST00000491282 TYW1BQ6NUM6 668 aa13.16□□□□□ -0.3
SOX2-OT-212ENST00000491282 RUFY3Q7L099 469 aa13.16□□□□□ -0.3
SOX2-OT-212ENST00000491282 TDHQ8IZJ6 230 aa13.16□□□□□ -0.3
SOX2-OT-212ENST00000491282 UPF3BQ9BZI7 483 aaKnown RBP13.16□□□□□ -0.3
SOX2-OT-212ENST00000491282 CYP46A1Q9Y6A2 500 aa13.16□□□□□ -0.3
SOX2-OT-212ENST00000491282 DNAH12Q6ZR08 3092 aa13.16□□□□□ -0.3
SOX2-OT-212ENST00000491282 TLR3O15455 904 aaKnown RBP13.15□□□□□ -0.3
SOX2-OT-212ENST00000491282 KPNA6O60684 536 aa13.15□□□□□ -0.3
SOX2-OT-212ENST00000491282 CD4P01730 458 aa13.15□□□□□ -0.3
SOX2-OT-212ENST00000491282 RCAN1P53805 252 aa13.15□□□□□ -0.3
SOX2-OT-212ENST00000491282 EPHB4P54760 987 aa13.15□□□□□ -0.3
SOX2-OT-212ENST00000491282 NAPAP54920 295 aa13.15□□□□□ -0.3
SOX2-OT-212ENST00000491282 CCT2P78371 535 aaKnown RBP13.15□□□□□ -0.3
SOX2-OT-212ENST00000491282 LAMC2Q13753 1193 aa13.15□□□□□ -0.3
SOX2-OT-212ENST00000491282 TOB2Q14106 344 aaPredicted RBP13.15□□□□□ -0.3
SOX2-OT-212ENST00000491282 NBPF20Q3BBV1 942 aa13.15□□□□□ -0.3
SOX2-OT-212ENST00000491282 FAM47CQ5HY64 1035 aa13.15□□□□□ -0.3
SOX2-OT-212ENST00000491282 DHX37Q8IY37 1157 aaKnown RBP13.15□□□□□ -0.3
SOX2-OT-212ENST00000491282 FBXL16Q8N461 479 aa13.15□□□□□ -0.3
SOX2-OT-212ENST00000491282 LRCH3Q96II8 777 aa13.15□□□□□ -0.3
SOX2-OT-212ENST00000491282 AGXT2Q9BYV1 514 aa13.15□□□□□ -0.3
SOX2-OT-212ENST00000491282 PPP1R12CQ9BZL4 782 aa13.15□□□□□ -0.3
SOX2-OT-212ENST00000491282 BCAS3Q9H6U6 928 aa13.15□□□□□ -0.3
SOX2-OT-212ENST00000491282 FRMPD4Q14CM0 1322 aa13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 CCDC196A0A1B0GTZ2 297 aa13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 STXBP3O00186 592 aa13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 B4GALT4O60513 344 aa13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 SLC34A2O95436 690 aa13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 GGPS1O95749 300 aa13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 TIMP1P01033 207 aa13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 MMP3P08254 477 aa13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 UBA1P22314 1058 aaKnown RBP13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 PDIA3P30101 505 aaKnown RBP13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 SHHQ15465 462 aa13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 C9orf50Q5SZB4 431 aa13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 CELF3Q5SZQ8 465 aaKnown RBP13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 MYSM1Q5VVJ2 828 aa13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 PHKBQ93100 1093 aa13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 TM6SF1Q9BZW5 370 aa13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 ALDH8A1Q9H2A2 487 aaPredicted RBP13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 NCOA5Q9HCD5 579 aaKnown RBP13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 TRMT13Q9NUP7 481 aaKnown RBP13.14□□□□□ -0.31
SOX2-OT-212ENST00000491282 SMCO2A6NFE2 343 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 SPDYE3A6NKU9 549 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 SPATA31C2B4DYI2 1134 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 CYP2C18P33260 490 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 FPGSQ05932 587 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 GNPTABQ3T906 1256 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 C8orf34Q49A92 452 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 PCNX4Q63HM2 1172 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 KCNV1Q6PIU1 500 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 KCNV2Q8TDN2 545 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 KAT2BQ92831 832 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 EMID1Q96A84 441 aaPredicted RBP13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 PGBD1Q96JS3 809 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 SPATA33Q96N06 139 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 INPP4AQ96PE3 977 aaPredicted RBP13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 RIC8AQ9NPQ8 531 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 PDRG1Q9NUG6 133 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 TMEM260Q9NX78 707 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 PCDHA6Q9UN73 950 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 PCDHA8Q9Y5H6 950 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 UMODL1Q5DID0 1318 aa13.13□□□□□ -0.31
SOX2-OT-212ENST00000491282 ZNF286BP0CG31 522 aa13.12□□□□□ -0.31
SOX2-OT-212ENST00000491282 TGFB3P10600 412 aa13.12□□□□□ -0.31
SOX2-OT-212ENST00000491282 CYP2C9P11712 490 aa13.12□□□□□ -0.31
SOX2-OT-212ENST00000491282 ICAM3P32942 547 aa13.12□□□□□ -0.31
SOX2-OT-212ENST00000491282 EVCP57679 992 aa13.12□□□□□ -0.31
SOX2-OT-212ENST00000491282 SEMA3FQ13275 785 aa13.12□□□□□ -0.31
SOX2-OT-212ENST00000491282 NTRK3Q16288 839 aa13.12□□□□□ -0.31
SOX2-OT-212ENST00000491282 DGKDQ16760 1214 aa13.12□□□□□ -0.31
SOX2-OT-212ENST00000491282 HSDL1Q3SXM5 330 aa13.12□□□□□ -0.31
SOX2-OT-212ENST00000491282 MFSD5Q6N075 450 aa13.12□□□□□ -0.31
SOX2-OT-212ENST00000491282 SEZ6LQ9BYH1 1024 aa13.12□□□□□ -0.31
SOX2-OT-212ENST00000491282 MLXIPQ9HAP2 919 aa13.12□□□□□ -0.31
SOX2-OT-212ENST00000491282 BARHL2Q9NY43 387 aa13.12□□□□□ -0.31
SOX2-OT-212ENST00000491282 RANBP2P49792 3224 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-212ENST00000491282 ADAMTS3O15072 1205 aa13.11□□□□□ -0.31
SOX2-OT-212ENST00000491282 PRPF3O43395 683 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-212ENST00000491282 FIBPO43427 364 aa13.11□□□□□ -0.31
SOX2-OT-212ENST00000491282 STAM2O75886 525 aa13.11□□□□□ -0.31
SOX2-OT-212ENST00000491282 ACRP10323 421 aa13.11□□□□□ -0.31
SOX2-OT-212ENST00000491282 SCG2P13521 617 aa13.11□□□□□ -0.31
SOX2-OT-212ENST00000491282 CSF2RAP15509 400 aa13.11□□□□□ -0.31
SOX2-OT-212ENST00000491282 ITGB5P18084 799 aa13.11□□□□□ -0.31
SOX2-OT-212ENST00000491282 ADCY7P51828 1080 aa13.11□□□□□ -0.31
SOX2-OT-212ENST00000491282 STK3Q13188 491 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms