RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 ZFP91Q96JP5 570 aaPredicted RBP21.1■□□□□ 0.97
MCF2L-230ENST00000491028 SPATA32Q96LK8 384 aa21.1■□□□□ 0.97
MCF2L-230ENST00000491028 WDR11Q9BZH6 1224 aa21.1■□□□□ 0.97
MCF2L-230ENST00000491028 ABHD16BQ9H3Z7 469 aa21.1■□□□□ 0.97
MCF2L-230ENST00000491028 KCNMB3Q9NPA1 279 aa21.1■□□□□ 0.97
MCF2L-230ENST00000491028 RCOR1Q9UKL0 485 aa21.1■□□□□ 0.97
MCF2L-230ENST00000491028 CNPY2Q9Y2B0 182 aa21.1■□□□□ 0.97
MCF2L-230ENST00000491028 CCL14Q16627 93 aa21.09■□□□□ 0.97
MCF2L-230ENST00000491028 CSPP1Q1MSJ5 1256 aa21.09■□□□□ 0.97
MCF2L-230ENST00000491028 KCNV1Q6PIU1 500 aa21.09■□□□□ 0.97
MCF2L-230ENST00000491028 OTOP1Q7RTM1 612 aa21.09■□□□□ 0.97
MCF2L-230ENST00000491028 SLFN12Q8IYM2 578 aa21.09■□□□□ 0.97
MCF2L-230ENST00000491028 C4orf32Q8N8J7 132 aa21.09■□□□□ 0.97
MCF2L-230ENST00000491028 ETNPPLQ8TBG4 499 aa21.09■□□□□ 0.97
MCF2L-230ENST00000491028 CHAMP1Q96JM3 812 aa21.09■□□□□ 0.97
MCF2L-230ENST00000491028 FAM20AQ96MK3 541 aa21.09■□□□□ 0.97
MCF2L-230ENST00000491028 TMEM60Q9H2L4 133 aa21.09■□□□□ 0.97
MCF2L-230ENST00000491028 FLRT1Q9NZU1 646 aa21.09■□□□□ 0.97
MCF2L-230ENST00000491028 NRBP1Q9UHY1 535 aa21.09■□□□□ 0.97
MCF2L-230ENST00000491028 DDX49Q9Y6V7 483 aaKnown RBP21.09■□□□□ 0.97
MCF2L-230ENST00000491028 SPTLC2O15270 562 aa21.08■□□□□ 0.97
MCF2L-230ENST00000491028 PPP6R2O75170 966 aa21.08■□□□□ 0.97
MCF2L-230ENST00000491028 SNAI1O95863 264 aaPredicted RBP21.08■□□□□ 0.97
MCF2L-230ENST00000491028 CTCFP49711 727 aaPredicted RBP21.08■□□□□ 0.97
MCF2L-230ENST00000491028 MFSD14CQ5VZR4 134 aa21.08■□□□□ 0.97
MCF2L-230ENST00000491028 FBXO16Q8IX29 292 aaPredicted RBP21.08■□□□□ 0.97
MCF2L-230ENST00000491028 RAET1EQ8TD07 263 aa21.08■□□□□ 0.97
MCF2L-230ENST00000491028 PXYLP1Q8TE99 480 aa21.08■□□□□ 0.97
MCF2L-230ENST00000491028 LEO1Q8WVC0 666 aaPredicted RBP21.08■□□□□ 0.97
MCF2L-230ENST00000491028 TRIB2Q92519 343 aa21.08■□□□□ 0.97
MCF2L-230ENST00000491028 MTMR9Q96QG7 549 aa21.08■□□□□ 0.97
MCF2L-230ENST00000491028 KATNBL1Q9H079 304 aa21.08■□□□□ 0.97
MCF2L-230ENST00000491028 KCNH7Q9NS40 1196 aa21.08■□□□□ 0.97
MCF2L-230ENST00000491028 TRIM17Q9Y577 477 aa21.08■□□□□ 0.97
MCF2L-230ENST00000491028 ELP1O95163 1332 aa21.07■□□□□ 0.96
MCF2L-230ENST00000491028 SPATA31C2B4DYI2 1134 aa21.07■□□□□ 0.96
MCF2L-230ENST00000491028 MSH4O15457 936 aa21.07■□□□□ 0.96
MCF2L-230ENST00000491028 MARCH6O60337 910 aa21.07■□□□□ 0.96
MCF2L-230ENST00000491028 ARP10275 920 aa21.07■□□□□ 0.96
MCF2L-230ENST00000491028 TGFB3P10600 412 aa21.07■□□□□ 0.96
MCF2L-230ENST00000491028 TNS4Q8IZW8 715 aa21.07■□□□□ 0.96
MCF2L-230ENST00000491028 ZNF577Q9BSK1 485 aa21.07■□□□□ 0.96
MCF2L-230ENST00000491028 AGO4Q9HCK5 861 aaKnown RBP21.07■□□□□ 0.96
MCF2L-230ENST00000491028 RBM47A0AV96 593 aaKnown RBP21.06■□□□□ 0.96
MCF2L-230ENST00000491028 SEMA3FQ13275 785 aa21.06■□□□□ 0.96
MCF2L-230ENST00000491028 ACVR2BQ13705 512 aa21.06■□□□□ 0.96
MCF2L-230ENST00000491028 SEPT14Q6ZU15 432 aa21.06■□□□□ 0.96
MCF2L-230ENST00000491028 EEPD1Q7L9B9 569 aa21.06■□□□□ 0.96
MCF2L-230ENST00000491028 SCFD2Q8WU76 684 aa21.06■□□□□ 0.96
MCF2L-230ENST00000491028 HAS1Q92839 578 aa21.06■□□□□ 0.96
MCF2L-230ENST00000491028 SLC5A5Q92911 643 aa21.06■□□□□ 0.96
MCF2L-230ENST00000491028 FERMT2Q96AC1 680 aa21.06■□□□□ 0.96
MCF2L-230ENST00000491028 RIT2Q99578 217 aa21.06■□□□□ 0.96
MCF2L-230ENST00000491028 MRVI1Q9Y6F6 885 aa21.06■□□□□ 0.96
MCF2L-230ENST00000491028 IPO5O00410 1097 aaKnown RBP21.05■□□□□ 0.96
MCF2L-230ENST00000491028 ADCY3O60266 1144 aa21.05■□□□□ 0.96
MCF2L-230ENST00000491028 CYP2C19P33261 490 aa21.05■□□□□ 0.96
MCF2L-230ENST00000491028 TMEM266Q2M3C6 531 aa21.05■□□□□ 0.96
MCF2L-230ENST00000491028 TAPT1Q6NXT6 567 aa21.05■□□□□ 0.96
MCF2L-230ENST00000491028 TMEM87AQ8NBN3 555 aa21.05■□□□□ 0.96
MCF2L-230ENST00000491028 SLAIN1Q8ND83 568 aa21.05■□□□□ 0.96
MCF2L-230ENST00000491028 SENP7Q9BQF6 1050 aa21.05■□□□□ 0.96
MCF2L-230ENST00000491028 TBC1D22BQ9NU19 505 aa21.05■□□□□ 0.96
MCF2L-230ENST00000491028 ZHX1Q9UKY1 873 aaPredicted RBP21.05■□□□□ 0.96
MCF2L-230ENST00000491028 SRPRBQ9Y5M8 271 aaKnown RBP21.05■□□□□ 0.96
MCF2L-230ENST00000491028 NFASCO94856 1347 aa21.04■□□□□ 0.96
MCF2L-230ENST00000491028 HMGCRP04035 888 aa21.04■□□□□ 0.96
MCF2L-230ENST00000491028 KCNA2P16389 499 aa21.04■□□□□ 0.96
MCF2L-230ENST00000491028 MARCKSP29966 332 aaPredicted RBP21.04■□□□□ 0.96
MCF2L-230ENST00000491028 TTLL4Q14679 1199 aa21.04■□□□□ 0.96
MCF2L-230ENST00000491028 LRCH2Q5VUJ6 765 aa21.04■□□□□ 0.96
MCF2L-230ENST00000491028 DTHD1Q6ZMT9 781 aa21.04■□□□□ 0.96
MCF2L-230ENST00000491028 KRI1Q8N9T8 703 aaKnown RBP21.04■□□□□ 0.96
MCF2L-230ENST00000491028 GIMAP8Q8ND71 665 aaPredicted RBP21.04■□□□□ 0.96
MCF2L-230ENST00000491028 TEKT3Q9BXF9 490 aa21.04■□□□□ 0.96
MCF2L-230ENST00000491028 RAB34Q9BZG1 259 aa21.04■□□□□ 0.96
MCF2L-230ENST00000491028 GDPD2Q9HCC8 539 aa21.04■□□□□ 0.96
MCF2L-230ENST00000491028 FBXO2Q9UK22 296 aaPredicted RBP21.04■□□□□ 0.96
MCF2L-230ENST00000491028 PCNTO95613 3336 aa21.04■□□□□ 0.96
MCF2L-230ENST00000491028 GOLGA6L22H0YM25 854 aa21.03■□□□□ 0.96
MCF2L-230ENST00000491028 PSMD10O75832 226 aa21.03■□□□□ 0.96
MCF2L-230ENST00000491028 TXKP42681 527 aa21.03■□□□□ 0.96
MCF2L-230ENST00000491028 ME1P48163 572 aa21.03■□□□□ 0.96
MCF2L-230ENST00000491028 FXR2P51116 673 aaKnown RBP eCLIP21.03■□□□□ 0.96
MCF2L-230ENST00000491028 NEDD9Q14511 834 aa21.03■□□□□ 0.96
MCF2L-230ENST00000491028 CCDC62Q6P9F0 684 aa21.03■□□□□ 0.96
MCF2L-230ENST00000491028 SDF4Q9BRK5 362 aa21.03■□□□□ 0.96
MCF2L-230ENST00000491028 TTC12Q9H892 705 aaPredicted RBP21.03■□□□□ 0.96
MCF2L-230ENST00000491028 TCEAL9Q9UHQ7 104 aa21.03■□□□□ 0.96
MCF2L-230ENST00000491028 PCDHA12Q9UN75 941 aa21.03■□□□□ 0.96
MCF2L-230ENST00000491028 GAS7O60861 476 aa21.02■□□□□ 0.96
MCF2L-230ENST00000491028 CUTAO60888 179 aa21.02■□□□□ 0.96
MCF2L-230ENST00000491028 ATP9AO75110 1047 aa21.02■□□□□ 0.96
MCF2L-230ENST00000491028 ZNF865P0CJ78 1059 aaPredicted RBP21.02■□□□□ 0.96
MCF2L-230ENST00000491028 CYBAP13498 195 aa21.02■□□□□ 0.96
MCF2L-230ENST00000491028 ELNP15502 786 aa21.02■□□□□ 0.96
MCF2L-230ENST00000491028 UBA1P22314 1058 aaKnown RBP21.02■□□□□ 0.96
MCF2L-230ENST00000491028 LBX1P52954 281 aa21.02■□□□□ 0.96
MCF2L-230ENST00000491028 ITGB3BPQ13352 177 aaPredicted RBP21.02■□□□□ 0.96
MCF2L-230ENST00000491028 IQSEC1Q6DN90 963 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms