RNA–Protein interactions for RNA: ENST00000490953.5

SBDS-204, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 1 (best)

Gene SBDS, Length 841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-204ENST00000490953 GRXCR1A8MXD5 290 aa21.03■□□□□ 0.96
SBDS-204ENST00000490953 PIK3CDO00329 1044 aa21.03■□□□□ 0.96
SBDS-204ENST00000490953 MEIS2O14770 477 aa21.03■□□□□ 0.96
SBDS-204ENST00000490953 F2P00734 622 aa21.03■□□□□ 0.96
SBDS-204ENST00000490953 SP2Q02086 613 aa21.03■□□□□ 0.96
SBDS-204ENST00000490953 BFSP2Q13515 415 aa21.03■□□□□ 0.96
SBDS-204ENST00000490953 MFSD10Q14728 455 aa21.03■□□□□ 0.96
SBDS-204ENST00000490953 HSDL1Q3SXM5 330 aa21.03■□□□□ 0.96
SBDS-204ENST00000490953 GDF6Q6KF10 455 aaPredicted RBP21.03■□□□□ 0.96
SBDS-204ENST00000490953 RETREG2Q8NC44 543 aa21.03■□□□□ 0.96
SBDS-204ENST00000490953 CDX2Q99626 313 aaPredicted RBP21.03■□□□□ 0.96
SBDS-204ENST00000490953 MLXIPQ9HAP2 919 aa21.03■□□□□ 0.96
SBDS-204ENST00000490953 RBM28Q9NW13 759 aaKnown RBP21.03■□□□□ 0.96
SBDS-204ENST00000490953 CXXC1Q9P0U4 656 aaPredicted RBP21.03■□□□□ 0.96
SBDS-204ENST00000490953 LAMA2P24043 3122 aaKnown RBP21.02■□□□□ 0.96
SBDS-204ENST00000490953 PITPNM1O00562 1244 aa21.02■□□□□ 0.96
SBDS-204ENST00000490953 ZBTB43O43298 467 aa21.02■□□□□ 0.96
SBDS-204ENST00000490953 PFKMP08237 780 aa21.02■□□□□ 0.96
SBDS-204ENST00000490953 KIAA0753Q2KHM9 967 aa21.02■□□□□ 0.96
SBDS-204ENST00000490953 HEATR3Q7Z4Q2 680 aa21.02■□□□□ 0.96
SBDS-204ENST00000490953 DEFB128Q7Z7B8 93 aa21.02■□□□□ 0.96
SBDS-204ENST00000490953 CCDC155Q8N6L0 562 aa21.02■□□□□ 0.96
SBDS-204ENST00000490953 C7orf31Q8N865 590 aa21.02■□□□□ 0.96
SBDS-204ENST00000490953 SLC17A8Q8NDX2 589 aa21.02■□□□□ 0.96
SBDS-204ENST00000490953 TIFAQ96CG3 184 aa21.02■□□□□ 0.96
SBDS-204ENST00000490953 INPP4AQ96PE3 977 aaPredicted RBP21.02■□□□□ 0.96
SBDS-204ENST00000490953 PSTPIP2Q9H939 334 aa21.02■□□□□ 0.96
SBDS-204ENST00000490953 RTEL1Q9NZ71 1219 aa21.02■□□□□ 0.96
SBDS-204ENST00000490953 HDAC6Q9UBN7 1215 aa21.02■□□□□ 0.96
SBDS-204ENST00000490953 CNTNAP5Q8WYK1 1306 aa21.02■□□□□ 0.95
SBDS-204ENST00000490953 FIBPO43427 364 aa21.01■□□□□ 0.95
SBDS-204ENST00000490953 HMGB1P09429 215 aaKnown RBP21.01■□□□□ 0.95
SBDS-204ENST00000490953 HOXD8P13378 290 aaPredicted RBP21.01■□□□□ 0.95
SBDS-204ENST00000490953 ICAM3P32942 547 aa21.01■□□□□ 0.95
SBDS-204ENST00000490953 RFC2P35250 354 aa21.01■□□□□ 0.95
SBDS-204ENST00000490953 RTN1Q16799 776 aa21.01■□□□□ 0.95
SBDS-204ENST00000490953 PCNX4Q63HM2 1172 aa21.01■□□□□ 0.95
SBDS-204ENST00000490953 PBX4Q9BYU1 374 aa21.01■□□□□ 0.95
SBDS-204ENST00000490953 GTF2IRD1Q9UHL9 959 aa21.01■□□□□ 0.95
SBDS-204ENST00000490953 BRPF3Q9ULD4 1205 aa21.01■□□□□ 0.95
SBDS-204ENST00000490953 TRIP12Q14669 1992 aaPredicted RBP21.01■□□□□ 0.95
SBDS-204ENST00000490953 KLF18A0A0U1RQI7 1052 aa21■□□□□ 0.95
SBDS-204ENST00000490953 GOLGA8AA7E2F4 631 aa21■□□□□ 0.95
SBDS-204ENST00000490953 GOLGA8BA8MQT2 603 aa21■□□□□ 0.95
SBDS-204ENST00000490953 ZBBXA8MT70 800 aa21■□□□□ 0.95
SBDS-204ENST00000490953 HAS3O00219 553 aa21■□□□□ 0.95
SBDS-204ENST00000490953 PPFIA4O75335 1185 aa21■□□□□ 0.95
SBDS-204ENST00000490953 IQCF3P0C7M6 154 aa21■□□□□ 0.95
SBDS-204ENST00000490953 PBX2P40425 430 aa21■□□□□ 0.95
SBDS-204ENST00000490953 FGD1P98174 961 aa21■□□□□ 0.95
SBDS-204ENST00000490953 UBE2SQ16763 222 aa21■□□□□ 0.95
SBDS-204ENST00000490953 XRRA1Q6P2D8 792 aa21■□□□□ 0.95
SBDS-204ENST00000490953 MYLIPQ8WY64 445 aa21■□□□□ 0.95
SBDS-204ENST00000490953 VWCEQ96DN2 955 aa21■□□□□ 0.95
SBDS-204ENST00000490953 NAP1L2Q9ULW6 460 aaPredicted RBP21■□□□□ 0.95
SBDS-204ENST00000490953 SPATA31C2B4DYI2 1134 aa20.99■□□□□ 0.95
SBDS-204ENST00000490953 NOP56O00567 594 aaKnown RBP20.99■□□□□ 0.95
SBDS-204ENST00000490953 SEMA3FQ13275 785 aa20.99■□□□□ 0.95
SBDS-204ENST00000490953 NEDD9Q14511 834 aa20.99■□□□□ 0.95
SBDS-204ENST00000490953 CAGE1Q8TC20 777 aa20.99■□□□□ 0.95
SBDS-204ENST00000490953 JAKMIP1Q96N16 626 aaKnown RBP20.99■□□□□ 0.95
SBDS-204ENST00000490953 CTAGE1Q96RT6 745 aa20.99■□□□□ 0.95
SBDS-204ENST00000490953 SLC4A7Q9Y6M7 1214 aa20.99■□□□□ 0.95
SBDS-204ENST00000490953 SPDYE3A6NKU9 549 aa20.98■□□□□ 0.95
SBDS-204ENST00000490953 ACTN1P12814 892 aa20.98■□□□□ 0.95
SBDS-204ENST00000490953 CPA1P15085 419 aa20.98■□□□□ 0.95
SBDS-204ENST00000490953 HSPA4P34932 840 aa20.98■□□□□ 0.95
SBDS-204ENST00000490953 RAB30Q15771 203 aa20.98■□□□□ 0.95
SBDS-204ENST00000490953 WWC2Q6AWC2 1192 aa20.98■□□□□ 0.95
SBDS-204ENST00000490953 CYFIP1Q7L576 1253 aa20.98■□□□□ 0.95
SBDS-204ENST00000490953 NLRX1Q86UT6 975 aa20.98■□□□□ 0.95
SBDS-204ENST00000490953 AFAP1L1Q8TED9 768 aa20.98■□□□□ 0.95
SBDS-204ENST00000490953 KCNB2Q92953 911 aa20.98■□□□□ 0.95
SBDS-204ENST00000490953 ZNF576Q9H609 170 aa20.98■□□□□ 0.95
SBDS-204ENST00000490953 BCAS3Q9H6U6 928 aa20.98■□□□□ 0.95
SBDS-204ENST00000490953 MSRAQ9UJ68 235 aa20.98■□□□□ 0.95
SBDS-204ENST00000490953 SNX14Q9Y5W7 946 aa20.98■□□□□ 0.95
SBDS-204ENST00000490953 REC8O95072 547 aa20.97■□□□□ 0.95
SBDS-204ENST00000490953 LGALS2P05162 132 aa20.97■□□□□ 0.95
SBDS-204ENST00000490953 FOSL2P15408 326 aa20.97■□□□□ 0.95
SBDS-204ENST00000490953 NAPAP54920 295 aa20.97■□□□□ 0.95
SBDS-204ENST00000490953 BLOC1S2Q6QNY1 142 aa20.97■□□□□ 0.95
SBDS-204ENST00000490953 METTL7BQ6UX53 244 aa20.97■□□□□ 0.95
SBDS-204ENST00000490953 DHX38Q92620 1227 aaKnown RBP20.97■□□□□ 0.95
SBDS-204ENST00000490953 C16orf70Q9BSU1 422 aa20.97■□□□□ 0.95
SBDS-204ENST00000490953 FTOQ9C0B1 505 aaKnown RBP eCLIP20.97■□□□□ 0.95
SBDS-204ENST00000490953 COL6A3P12111 3177 aa20.96■□□□□ 0.95
SBDS-204ENST00000490953 RCAN1P53805 252 aa20.96■□□□□ 0.95
SBDS-204ENST00000490953 FUT2Q10981 343 aa20.96■□□□□ 0.95
SBDS-204ENST00000490953 GRIN2CQ14957 1233 aa20.96■□□□□ 0.95
SBDS-204ENST00000490953 Q6ZUG5 572 aa20.96■□□□□ 0.95
SBDS-204ENST00000490953 LRRC8DQ7L1W4 858 aa20.96■□□□□ 0.95
SBDS-204ENST00000490953 EHMT1Q9H9B1 1298 aa20.96■□□□□ 0.95
SBDS-204ENST00000490953 PCDHA6Q9UN73 950 aa20.96■□□□□ 0.95
SBDS-204ENST00000490953 PCDHA8Q9Y5H6 950 aa20.96■□□□□ 0.95
SBDS-204ENST00000490953 H3BRB1 525 aa20.95■□□□□ 0.94
SBDS-204ENST00000490953 SELPP16109 830 aa20.95■□□□□ 0.94
SBDS-204ENST00000490953 CDC27P30260 824 aa20.95■□□□□ 0.94
SBDS-204ENST00000490953 METAP2P50579 478 aaKnown RBP eCLIP20.95■□□□□ 0.94
SBDS-204ENST00000490953 SP4Q02446 784 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms